chr start stop reference nuc variant nuc depth genic status zygosity variant ID 3 10060470 10060471 G GTGTC 16 INTERGENIC homozygous 57144250 3 10060656 10060657 G C 31 INTERGENIC homozygous 57144256 3 10132308 10132309 G T 56 INTERGENIC heterozygous 58338954