chr start stop reference nuc variant nuc depth genic status zygosity variant ID 3 129699795 129699796 A G 18 GENIC homozygous 57670623 3 129700294 129700295 A AGGAG 12 GENIC homozygous 57670625 3 129700863 129700864 G A 24 GENIC homozygous 57670627 3 129703119 129703120 G - 20 GENIC homozygous 57670629 3 129703123 129703124 A T 26 GENIC homozygous 57670631 3 129703406 129703407 A C 31 GENIC homozygous 57670633 3 129704097 129704099 TC -- 30 GENIC homozygous 57670634 3 129704392 129704393 G GA 35 GENIC homozygous 57670636 3 129704684 129704685 A C 28 GENIC homozygous 57670638 3 129704704 129704705 G C 26 GENIC homozygous 57670640 3 129704985 129704986 G GAA 13 INTERGENIC homozygous 57670642 3 129705231 129705232 C T 23 INTERGENIC homozygous 57670644 3 129705557 129705558 G T 17 INTERGENIC homozygous 57670646 3 129705760 129705762 AA -- 14 INTERGENIC possibly homozygous 57670648 3 129705761 129705762 A AAC 15 INTERGENIC heterozygous 57670650 3 129705761 129705762 A - 14 INTERGENIC heterozygous 58322576 3 129705856 129705857 T TA 17 INTERGENIC homozygous 57670652 3 129706250 129706251 C T 29 INTERGENIC homozygous 57670654 3 129706792 129706793 G GT 12 INTERGENIC heterozygous 57670656 3 129706793 129706794 T - 12 INTERGENIC heterozygous 57670658 3 129707090 129707091 G A 14 INTERGENIC homozygous 57670660 3 129708044 129708045 A AT 6 GENIC homozygous 57670662 3 129708285 129708286 A AG 23 GENIC homozygous 57670664 3 129708608 129708609 G T 27 GENIC homozygous 57670666 3 129708637 129708638 A G 34 GENIC homozygous 57670668 3 129708791 129708792 A T 20 GENIC homozygous 57670670 3 129708793 129708794 A AGCTGTC 18 GENIC homozygous 57670672 3 129709753 129709754 C CGTGTGTGTGT 16 GENIC possibly homozygous 57670676 3 129709807 129709808 T C 27 GENIC homozygous 57670678 3 129710866 129710867 G T 19 GENIC heterozygous 57670680 3 129710892 129710893 C T 15 GENIC homozygous 57670682 3 129711221 129711222 G A 37 GENIC homozygous 57670684 3 129711437 129711438 C T 43 GENIC homozygous 57670686 3 129711716 129711717 T A 29 GENIC homozygous 57670688 3 129711879 129711882 CTG --- 12 GENIC heterozygous 57670690 3 129712146 129712147 T G 30 GENIC homozygous 57670692 3 129712681 129712682 C CATGCCT 26 GENIC homozygous 57670694 3 129712774 129712775 C T 21 GENIC homozygous 57670696 3 129713043 129713044 T TA 9 GENIC homozygous 57670698 3 129713653 129713654 A T 25 GENIC homozygous 57670699 3 129714047 129714048 A G 16 GENIC homozygous 57670701 3 129714069 129714072 CTT --- 7 GENIC possibly homozygous 57670703 3 129714073 129714076 TAT --- 6 GENIC homozygous 57670705 3 129714078 129714079 A - 6 GENIC homozygous 57670707 3 129715054 129715055 G A 26 GENIC homozygous 57670709 3 129715229 129715230 C CA 3 GENIC heterozygous 57670711 3 129715270 129715271 A G 13 GENIC homozygous 57670713 3 129715333 129715334 T TAG 16 GENIC homozygous 57670715 3 129715518 129715519 C T 34 GENIC homozygous 57670717 3 129715599 129715600 G A 32 GENIC homozygous 57670719 3 129716465 129716466 C CCTGCCT 15 GENIC homozygous 57670721 3 129717971 129717985 TCAAACATGGTGTG -------------- 8 GENIC heterozygous 57670723 3 129721841 129721842 G A 32 INTERGENIC homozygous 57670727 3 129721898 129721899 G A 32 INTERGENIC homozygous 57670729 3 129722281 129722282 A G 29 INTERGENIC homozygous 57670731 3 129722809 129722810 T C 32 GENIC homozygous 57670733 3 129723619 129723620 C A 25 GENIC homozygous 57670735 3 129723694 129723695 A G 21 GENIC homozygous 57670737 3 129724116 129724117 A G 43 GENIC homozygous 57670739 3 129724148 129724149 G A 43 GENIC possibly homozygous 57670741 3 129724981 129724982 A C 29 GENIC homozygous 57670743 3 129725784 129725785 G C 36 GENIC homozygous 57670745 3 129725946 129725947 T - 22 GENIC homozygous 57670747 3 129725954 129725955 A AG 19 GENIC homozygous 57670749 3 129725970 129725971 C CA 12 GENIC homozygous 57670751 3 129726261 129726262 C T 33 GENIC homozygous 57670753 3 129726522 129726523 A AT 9 GENIC homozygous 57670755 3 129726594 129726595 T TCACATGGAGCTTAA 11 GENIC homozygous 57670757 3 129726599 129726600 T TGGA 22 GENIC heterozygous 57670758 3 129726691 129726692 G A 32 GENIC homozygous 57670760 3 129727267 129727268 C T 36 GENIC possibly homozygous 57670762 3 129727927 129727928 C T 36 GENIC homozygous 57670764 3 129728862 129728866 CAAA ---- 28 GENIC homozygous 57670766 3 129728936 129728937 A T 33 GENIC homozygous 57670768 3 129729008 129729009 A G 21 GENIC heterozygous 57670770 3 129729014 129729015 A G 21 GENIC heterozygous 57670772 3 129729017 129729018 A G 20 GENIC heterozygous 57670774 3 129729032 129729033 A G 19 GENIC heterozygous 58322577 3 129729075 129729080 GAGGG ----- 6 GENIC homozygous 57670778 3 129729077 129729079 GG -- 6 GENIC homozygous 57670780 3 129729088 129729097 GGAAGAGAG --------- 6 GENIC homozygous 57670782 3 129729178 129729179 A G 27 GENIC possibly homozygous 57670784 3 129729213 129729214 A ATGG 8 GENIC heterozygous 57670786 3 129729215 129729218 AAA --- 8 GENIC heterozygous 57670788 3 129729220 129729221 A G 11 GENIC heterozygous 57670789 3 129729229 129729230 A G 7 GENIC heterozygous 57670791 3 129729257 129729259 AA -- 5 GENIC heterozygous 57670795 3 129729268 129729269 A G 14 GENIC heterozygous 57670801 3 129729312 129729313 A AG 5 GENIC heterozygous 57670803 3 129729414 129729415 G A 22 GENIC homozygous 57670807 3 129730039 129730040 G A 34 GENIC homozygous 57670809 3 129730487 129730488 A T 33 GENIC homozygous 57670811 3 129730662 129730663 A G 21 GENIC homozygous 57670813 3 129730841 129730842 T C 31 GENIC homozygous 57670815 3 129730916 129730917 A - 15 GENIC homozygous 57670817 3 129730968 129730969 C A 23 GENIC homozygous 57670819 3 129731663 129731664 C G 38 GENIC homozygous 57670821 3 129732411 129732412 C T 24 GENIC homozygous 57670823 3 129732596 129732597 T C 30 GENIC homozygous 57670825 3 129732780 129732781 G GAAAC 12 GENIC homozygous 57670827 3 129733906 129733907 A G 31 GENIC homozygous 57670829 3 129734256 129734257 C G 36 GENIC homozygous 57670831 3 129734629 129734630 G GGGAGGGACTAC 18 GENIC homozygous 57670837 3 129716478 129716479 C - 21 GENIC heterozygous 58037309 3 129729006 129729009 GAA --- 14 GENIC heterozygous 58037310 3 129729026 129729027 A G 18 GENIC heterozygous 58037311 3 129729250 129729252 AG -- 5 GENIC heterozygous 58037312 3 129716492 129716494 TT -- 3 GENIC homozygous 58197108 3 129734552 129734553 C - 30 GENIC homozygous 57670833 3 129734562 129734563 G - 28 GENIC homozygous 57670835 3 129734631 129734632 A G 26 GENIC heterozygous 57670839 3 129735139 129735140 T C 38 INTERGENIC homozygous 57670841 3 129736276 129736278 CC -- 22 INTERGENIC heterozygous 57670843 3 129736279 129736281 AC -- 22 INTERGENIC heterozygous 57670845 3 129736284 129736285 C A 22 INTERGENIC homozygous 57670847 3 129736288 129736289 C A 24 INTERGENIC homozygous 57670849 3 129736386 129736387 G A 33 INTERGENIC homozygous 57670851 3 129736394 129736395 T C 31 INTERGENIC homozygous 57670853 3 129736719 129736721 TT -- 17 INTERGENIC heterozygous 57670855 3 129736735 129736736 T TG 18 INTERGENIC heterozygous 57670857 3 129736741 129736742 T G 20 INTERGENIC heterozygous 57670859 3 129736742 129736743 C G 20 INTERGENIC heterozygous 57670861 3 129736743 129736744 A AG 19 INTERGENIC heterozygous 57670863 3 129736769 129736770 T G 14 INTERGENIC heterozygous 58197114 3 129736998 129736999 T C 21 INTERGENIC possibly homozygous 57670865 3 129737063 129737064 C T 32 INTERGENIC homozygous 57670867 3 129737139 129737140 A G 20 INTERGENIC homozygous 57670869 3 129737503 129737504 T C 14 INTERGENIC homozygous 57670871 3 129737596 129737600 CAGA ---- 21 INTERGENIC homozygous 57670873 3 129737785 129737786 C T 21 INTERGENIC homozygous 57670875 3 129738255 129738257 TA -- 19 INTERGENIC homozygous 57670877 3 129738265 129738266 T G 18 INTERGENIC possibly homozygous 57670879 3 129738267 129738268 T G 19 INTERGENIC possibly homozygous 57670881 3 129738322 129738323 A G 9 INTERGENIC homozygous 57670883 3 129738461 129738462 T G 23 INTERGENIC homozygous 57670885 3 129738471 129738472 T A 25 INTERGENIC homozygous 57670887 3 129738497 129738498 A T 22 INTERGENIC homozygous 57670889 3 129738508 129738509 C T 21 INTERGENIC homozygous 57670891 3 129738514 129738515 G A 16 INTERGENIC homozygous 57670893 3 129738917 129738918 T C 27 INTERGENIC homozygous 57670895 3 129738998 129739016 GGGCCTTTTGCACATGCT ------------------ 10 INTERGENIC homozygous 57670897 3 129739764 129739765 A G 22 INTERGENIC homozygous 57670899 3 129739848 129739849 G A 4 INTERGENIC homozygous 57670901 3 129739950 129739951 T TA 2 INTERGENIC homozygous 57670903 3 129740173 129740174 T G 22 INTERGENIC homozygous 57670905 3 129740185 129740186 A G 21 INTERGENIC homozygous 57670907 3 129740440 129740441 C A 16 INTERGENIC homozygous 57670909 3 129740544 129740545 C T 22 INTERGENIC homozygous 57670911 3 129740762 129740763 G A 42 INTERGENIC homozygous 57670913 3 129740923 129740924 G C 22 INTERGENIC homozygous 57670915 3 129740940 129740941 C T 24 INTERGENIC homozygous 57670917 3 129741155 129741156 A AG 17 INTERGENIC heterozygous 57670919 3 129741218 129741219 G A 23 INTERGENIC possibly homozygous 57670921 3 129741399 129741400 T C 8 INTERGENIC homozygous 58037313 3 129741411 129741412 T C 8 INTERGENIC homozygous 58322578 3 129741426 129741427 T C 11 INTERGENIC homozygous 58322579 3 129741678 129741679 G GA 12 INTERGENIC homozygous 57670923 3 129741700 129741701 G A 19 INTERGENIC homozygous 57670925 3 129741736 129741737 A AGTGTGT 5 INTERGENIC homozygous 57670927 3 129741758 129741759 C T 23 INTERGENIC heterozygous 58322580 3 129742214 129742215 T C 21 INTERGENIC homozygous 57670931 3 129742327 129742328 C T 22 INTERGENIC homozygous 57670933 3 129743236 129743237 C CT 17 INTERGENIC homozygous 57670935 3 129743628 129743629 C T 24 GENIC homozygous 57670937 3 129745073 129745074 A C 34 GENIC homozygous 57670938 3 129745587 129745588 A G 19 GENIC homozygous 57670940 3 129745591 129745592 A G 15 GENIC homozygous 57670942 3 129745594 129745623 CATTCATTCATTCATTCATTCATTCATTC ----------------------------- 12 GENIC homozygous 57670944 3 129745622 129745623 C - 12 GENIC homozygous 57670946 3 129745902 129745903 G A 28 GENIC homozygous 57670948 3 129746203 129746204 C T 29 GENIC homozygous 57670950 3 129746375 129746376 C A 29 GENIC homozygous 57670952 3 129746615 129746616 C T 35 GENIC homozygous 57670954 3 129746966 129746967 A C 23 GENIC homozygous 57670956 3 129747358 129747359 C A 22 GENIC homozygous 57670958 3 129747658 129747659 G A 23 GENIC homozygous 57670959 3 129748380 129748381 G GACGCCATGAGCTC 19 GENIC homozygous 57670961 3 129748404 129748405 T C 25 GENIC homozygous 57670963 3 129748621 129748622 A G 34 GENIC homozygous 57670965 3 129748693 129748694 C T 32 GENIC homozygous 57670966 3 129748958 129748959 A G 17 GENIC homozygous 57670968 3 129750317 129750318 T C 19 GENIC homozygous 57670982 3 129749432 129749433 G A 10 GENIC possibly homozygous 57670970 3 129749448 129749449 G A 23 GENIC heterozygous 57670972 3 129749668 129749669 C - 29 GENIC homozygous 57670974 3 129749686 129749687 A G 36 GENIC homozygous 57670976 3 129750008 129750009 T C 26 GENIC homozygous 57670978 3 129750127 129750128 T C 32 GENIC homozygous 57670980 3 129750601 129750602 T C 14 GENIC homozygous 57670984 3 129750631 129750632 A C 12 GENIC homozygous 57670986 3 129750819 129750820 T TA 14 GENIC homozygous 57670988 3 129751840 129751841 T A 20 GENIC homozygous 57670992 3 129752263 129752264 T C 23 GENIC homozygous 57670994 3 129752457 129752458 T C 24 GENIC homozygous 57670996 3 129752947 129752948 T C 19 GENIC homozygous 57670998 3 129753020 129753021 T TTTTTTTTC 18 GENIC homozygous 57671000 3 129753024 129753025 C - 16 GENIC possibly homozygous 57671002 3 129753528 129753529 G A 27 GENIC homozygous 57671004 3 129753665 129753666 C A 21 GENIC homozygous 57671006 3 129754048 129754049 A G 20 GENIC homozygous 57671008 3 129754632 129754633 C T 19 GENIC homozygous 57671010 3 129754759 129754761 GT -- 32 GENIC homozygous 57671012 3 129755180 129755181 T C 26 GENIC homozygous 57671014 3 129755442 129755443 T C 21 GENIC homozygous 57671016 3 129755837 129755838 G A 24 GENIC homozygous 57671018 3 129756603 129756604 T - 2 GENIC homozygous 57671020 3 129756650 129756662 CTGAAAGTCACT ------------ 3 GENIC homozygous 57671022 3 129756751 129756752 G C 15 GENIC homozygous 57671024 3 129756947 129756948 C G 14 GENIC homozygous 57671026 3 129757590 129757591 A C 26 GENIC homozygous 57671028 3 129757854 129757855 T C 17 GENIC homozygous 57671034 3 129757899 129757900 G A 24 GENIC homozygous 57671036 3 129758128 129758130 TT -- 15 GENIC homozygous 57671038 3 129758525 129758526 C T 22 GENIC homozygous 57671040 3 129758699 129758700 A C 8 GENIC homozygous 57671042 3 129758704 129758705 T TA 3 GENIC homozygous 57671044 3 129758718 129758719 T TA 6 GENIC homozygous 57671046 3 129758953 129758954 T A 23 GENIC homozygous 57671048 3 129759425 129759426 C T 39 GENIC homozygous 57671050 3 129759501 129759502 T TG 28 GENIC homozygous 57671052 3 129759719 129759723 TATA ---- 19 GENIC homozygous 57671054 3 129759774 129759775 G A 25 GENIC homozygous 57671056 3 129759898 129759899 G A 22 GENIC homozygous 57671057 3 129760509 129760510 A T 31 GENIC heterozygous 57671059 3 129760510 129760518 GTTAGTTT -------- 30 GENIC homozygous 57671061 3 129760722 129760723 C T 32 GENIC homozygous 57671063 3 129761035 129761036 A G 29 GENIC heterozygous 57671067 3 129761043 129761044 A G 31 GENIC heterozygous 57671069 3 129761051 129761052 A G 31 GENIC heterozygous 57671070 3 129761096 129761100 GAAA ---- 19 GENIC heterozygous 57671072 3 129761101 129761102 A AAGGC 14 GENIC possibly homozygous 57671074 3 129761223 129761227 ACAC ---- 13 GENIC heterozygous 57671076 3 129761225 129761227 AC -- 13 GENIC heterozygous 57671078 3 129761380 129761381 A G 30 GENIC homozygous 57671080 3 129761559 129761560 C T 39 GENIC homozygous 57671082 3 129761737 129761738 T C 24 GENIC homozygous 57671084 3 129762599 129762600 T A 26 GENIC homozygous 57671086 3 129763150 129763151 C A 22 GENIC homozygous 57671088 3 129763810 129763811 C T 23 GENIC homozygous 57671090 3 129763980 129763981 T C 20 GENIC homozygous 57671092 3 129764686 129764688 CT -- 17 GENIC homozygous 57671094 3 129764778 129764779 A G 19 GENIC homozygous 57671096 3 129764863 129764864 G A 20 GENIC possibly homozygous 57671098 3 129764906 129764907 C CA 6 GENIC heterozygous 57671100 3 129764919 129764920 C A 8 GENIC homozygous 57671102 3 129765069 129765070 A AT 16 GENIC homozygous 57671104 3 129765532 129765533 G A 14 GENIC heterozygous 57671106 3 129765563 129765564 G A 19 GENIC heterozygous 57671108 3 129765587 129765588 A AG 9 GENIC heterozygous 57671110 3 129765587 129765588 A AAG 9 GENIC heterozygous 57671112 3 129765932 129765933 C CT 21 GENIC homozygous 57671113 3 129766052 129766053 T C 25 GENIC homozygous 57671115 3 129766176 129766177 C T 32 GENIC possibly homozygous 57671117 3 129766907 129766908 T C 29 GENIC possibly homozygous 57671119 3 129766947 129766948 C T 21 GENIC homozygous 57671121 3 129767281 129767282 C - 4 GENIC heterozygous 57671123 3 129767436 129767437 C CCT 2 GENIC heterozygous 57671126 3 129767565 129767566 T C 35 GENIC homozygous 57671128 3 129767701 129767702 C T 28 GENIC possibly homozygous 57671130 3 129767709 129767710 A G 27 GENIC possibly homozygous 57671132 3 129768069 129768070 A G 27 GENIC homozygous 57671134 3 129768391 129768392 T C 30 GENIC homozygous 57671136 3 129768617 129768618 G A 29 GENIC homozygous 57671138 3 129769353 129769354 A G 20 GENIC homozygous 57671140 3 129769442 129769443 G A 15 GENIC homozygous 57671142 3 129769474 129769475 G A 15 GENIC homozygous 57671144 3 129769547 129769548 G C 16 GENIC homozygous 57671145 3 129769863 129769864 C A 33 GENIC homozygous 57671147 3 129769883 129769884 A G 30 GENIC homozygous 57671149 3 129769968 129769969 T C 21 GENIC homozygous 57671151 3 129770755 129770756 G A 35 GENIC homozygous 57671153 3 129771002 129771003 C CACACACAG 21 GENIC homozygous 57671155 3 129771042 129771044 AG -- 19 GENIC homozygous 57671157 3 129771309 129771310 G C 19 GENIC homozygous 57671159 3 129771343 129771344 C A 19 GENIC homozygous 57671161 3 129771404 129771405 G A 20 GENIC homozygous 57671163 3 129777273 129777274 T C 16 GENIC homozygous 57671165 3 129777547 129777553 GATGAC ------ 15 GENIC homozygous 57671167 3 129778205 129778206 T C 7 GENIC homozygous 57671169 3 129779438 129779439 C T 23 GENIC homozygous 57671171 3 129780499 129780500 C T 13 GENIC heterozygous 57671173 3 129780503 129780504 C T 12 GENIC heterozygous 57671175 3 129782948 129782949 G A 31 GENIC homozygous 57671177 3 129784659 129784663 AAAC ---- 14 GENIC homozygous 57671179 3 129785776 129785777 T C 38 GENIC heterozygous 57671181 3 129785792 129785793 T C 45 GENIC heterozygous 57671183 3 129785807 129785808 C - 34 GENIC heterozygous 57671184 3 129786366 129786367 T G 7 GENIC homozygous 57671186 3 129787469 129787471 CC -- 14 GENIC homozygous 57671190 3 129788021 129788023 TG -- 5 GENIC homozygous 57671192