chr start stop reference nuc variant nuc depth genic status zygosity variant ID 20 11997942 11997958 TGTGTTTGTGTGTCTG ---------------- 7 GENIC homozygous 45897545 20 11998163 11998164 G A 14 GENIC possibly homozygous 45429865 20 11998731 11998732 T C 22 GENIC possibly homozygous 45429866 20 11998761 11998762 T G 30 GENIC homozygous 45429867 20 11998827 11998828 C T 23 GENIC possibly homozygous 45429868 20 11998906 11998907 G - 16 GENIC homozygous 45429869 20 11999261 11999262 T C 26 GENIC possibly homozygous 45429870 20 11999287 11999288 T A 25 GENIC homozygous 45429871 20 11999324 11999325 T C 25 GENIC homozygous 45429872 20 11999631 11999632 A G 20 GENIC possibly homozygous 45429873 20 12000222 12000223 T C 10 GENIC homozygous 45429874 20 12000993 12000994 C T 2 GENIC homozygous 45429876 20 12001113 12001115 CT -- 8 GENIC possibly homozygous 45429877 20 12001159 12001160 G C 7 GENIC homozygous 45429878 20 12001222 12001223 G A 4 GENIC homozygous 45429879 20 12001337 12001338 T C 10 GENIC homozygous 45429880 20 12001354 12001355 G A 1 GENIC homozygous 45819417 20 12001355 12001356 T G 1 GENIC homozygous 45819418 20 12001492 12001493 G A 10 GENIC heterozygous 45429884 20 12001893 12001894 A G 29 GENIC possibly homozygous 45429885 20 12001942 12001943 A G 15 GENIC heterozygous 45429886 20 12002160 12002161 C T 18 GENIC homozygous 45429887 20 12002457 12002458 G A 14 GENIC homozygous 45429888 20 12002582 12002583 A G 27 GENIC homozygous 45429889 20 12002742 12002743 T G 16 GENIC homozygous 45429890 20 12003302 12003303 G GTTT 9 GENIC heterozygous 45429891 20 12003633 12003634 A G 16 GENIC possibly homozygous 45429892 20 12003783 12003784 C T 20 GENIC homozygous 45429893 20 12003819 12003820 T C 13 GENIC homozygous 45429894 20 12003823 12003824 G A 15 GENIC homozygous 45429895 20 12003997 12003998 T C 11 GENIC homozygous 45429896 20 12004642 12004643 T TG 5 GENIC homozygous 45429897 20 12004742 12004743 A C 13 GENIC possibly homozygous 45429898 20 12004940 12004941 C T 18 GENIC homozygous 45429900 20 12004959 12004960 G A 15 GENIC homozygous 45429901 20 12005029 12005030 C T 24 GENIC possibly homozygous 45429902 20 12005418 12005419 A G 25 GENIC possibly homozygous 45429903 20 12005446 12005447 T C 21 GENIC homozygous 45429904 20 12005468 12005469 A G 19 GENIC homozygous 45429905 20 12005914 12005915 G A 15 GENIC possibly homozygous 45429906 20 12006258 12006259 T C 14 GENIC homozygous 45429907 20 12006379 12006380 C T 29 GENIC possibly homozygous 45429908 20 12006784 12006785 G A 15 GENIC homozygous 45429909 20 12007543 12007544 C T 14 GENIC homozygous 45429910 20 12007646 12007647 G A 4 GENIC homozygous 45429911 20 12007664 12007665 A G 4 GENIC homozygous 45429912 20 12008052 12008053 C CAGA 7 GENIC homozygous 45429916 20 12008668 12008669 C A 27 GENIC possibly homozygous 45429917 20 12008736 12008737 G A 22 GENIC possibly homozygous 45429918 20 12009402 12009403 T C 23 GENIC possibly homozygous 45429919 20 12010184 12010185 G - 3 GENIC homozygous 45429923 20 12010676 12010677 G A 13 GENIC homozygous 45429924 20 12010952 12010953 T C 24 GENIC possibly homozygous 45429925 20 12011516 12011517 C A 20 GENIC possibly homozygous 45429929 20 12011591 12011592 G T 23 GENIC possibly homozygous 45429930 20 12012867 12012868 A C 25 GENIC homozygous 45429931 20 12013035 12013036 T C 17 GENIC possibly homozygous 45429932 20 12013088 12013089 G A 13 GENIC homozygous 45429933 20 12013299 12013300 G A 22 GENIC possibly homozygous 45429934 20 12013845 12013846 G A 25 GENIC homozygous 45429935 20 12014176 12014177 A G 22 GENIC possibly homozygous 45429936 20 12014430 12014431 C T 19 GENIC homozygous 45429937 20 12015335 12015336 G A 25 GENIC possibly homozygous 45429938 20 12016644 12016645 T C 17 GENIC possibly homozygous 45429940 20 12016877 12016878 T C 29 GENIC homozygous 45429941 20 12017164 12017165 C - 3 GENIC heterozygous 45429942 20 12018145 12018146 T G 28 GENIC possibly homozygous 45429943 20 12018587 12018588 T C 16 GENIC possibly homozygous 45429944 20 12018718 12018719 A ATGTTTGTTTGTT 2 GENIC heterozygous 45897546 20 12019300 12019301 G A 17 GENIC possibly homozygous 45429945 20 12021099 12021100 A T 31 GENIC possibly homozygous 45429946 20 12022936 12022937 G GT 9 INTERGENIC possibly homozygous 45429947 20 12023544 12023545 G C 11 INTERGENIC homozygous 45429949 20 12023631 12023632 G A 12 INTERGENIC heterozygous 45429950 20 12023632 12023633 T C 12 INTERGENIC heterozygous 45429951 20 12023713 12023714 G A 26 INTERGENIC homozygous 45429952 20 12024132 12024133 T - 20 INTERGENIC homozygous 45429953 20 12024287 12024288 C G 23 INTERGENIC possibly homozygous 45429954 20 12025467 12025468 G A 5 INTERGENIC homozygous 45429955 20 12025470 12025471 G T 5 INTERGENIC homozygous 45429956 20 12025571 12025572 A G 18 INTERGENIC homozygous 45429957 20 12026049 12026050 G T 8 INTERGENIC possibly homozygous 45429958 20 12026095 12026155 GCGTGCGTGCGTGAGTGCGTGCGTGTGCGTGTGCGCGTGCGTGCGTGAGTGCGCGCGCGC ------------------------------------------------------------ 1 INTERGENIC homozygous 45819420 20 12026521 12026522 G C 14 INTERGENIC heterozygous 45622830 20 12026525 12026526 G GA 9 INTERGENIC heterozygous 45429963 20 12026748 12026749 C CAGCCATG 3 INTERGENIC homozygous 45429964 20 12026765 12026766 A G 12 INTERGENIC homozygous 45429965 20 12026856 12026857 T C 4 INTERGENIC heterozygous 45429966 20 12027071 12027072 G T 23 INTERGENIC homozygous 45429967 20 12027456 12027457 C A 18 INTERGENIC homozygous 45429968 20 12027863 12027864 G GGTGTGAGGCC 2 INTERGENIC homozygous 45429969 20 12028534 12028535 T C 19 INTERGENIC possibly homozygous 45429970 20 12029167 12029168 A G 10 INTERGENIC homozygous 45429971 20 12029182 12029183 A C 10 INTERGENIC homozygous 45429972 20 12029262 12029274 CTCGCTCTCGCT ------------ 1 INTERGENIC homozygous 45429973 20 12029844 12029845 A C 23 INTERGENIC homozygous 45429974 20 12029875 12029876 G T 18 INTERGENIC homozygous 45429975 20 12029913 12029914 G GC 14 INTERGENIC homozygous 45429976 20 12030248 12030249 A G 26 INTERGENIC homozygous 45429977 20 12030285 12030286 A G 17 INTERGENIC homozygous 45429978 20 12030291 12030292 A G 18 INTERGENIC homozygous 45429979 20 12030707 12030708 G A 27 INTERGENIC possibly homozygous 45429982 20 12031074 12031075 T C 26 GENIC homozygous 45429983 20 12031775 12031776 A AG 18 GENIC homozygous 45429984 20 12031868 12031869 G GTC 9 GENIC heterozygous 45429985 20 12032192 12032193 A AGT 8 GENIC homozygous 45429987 20 12033417 12033418 G GCTTTGGAGACGGTGGTGAGTTGCCACCGT 3 GENIC heterozygous 45429991 20 12033627 12033628 T - 16 GENIC homozygous 45429992 20 12034140 12034141 A G 11 GENIC possibly homozygous 45429993 20 12034147 12034148 G A 11 GENIC homozygous 45429994 20 12034659 12034660 C G 15 GENIC homozygous 45429995 20 12035818 12035819 C CA 13 INTERGENIC homozygous 45429996 20 12038206 12038207 C T 18 INTERGENIC homozygous 45429998 20 12038724 12038725 A G 10 INTERGENIC homozygous 45429999 20 12039219 12039220 C T 14 INTERGENIC homozygous 45430000 20 12040614 12040615 G A 20 INTERGENIC possibly homozygous 45430002 20 12042583 12042584 G A 19 INTERGENIC possibly homozygous 45430010 20 12043600 12043602 AA -- 1 INTERGENIC homozygous 45430011 20 12043900 12043901 T C 18 INTERGENIC possibly homozygous 45430012 20 12045639 12045640 A - 4 INTERGENIC homozygous 45430016 20 12047397 12047401 ACAT ---- 4 INTERGENIC homozygous 45819422 20 12047474 12047475 C CAT 2 INTERGENIC heterozygous 45897547 20 12047480 12047481 C CAAACACACAT 3 INTERGENIC heterozygous 45897548 20 12047667 12047668 G - 17 INTERGENIC possibly homozygous 45430031 20 12048135 12048136 T C 20 INTERGENIC heterozygous 45430033 20 12049776 12049780 CTAA ---- 5 INTERGENIC homozygous 45430038 20 12050652 12050653 T TG 3 INTERGENIC homozygous 45430041 20 12050786 12050787 G A 22 INTERGENIC homozygous 45430042 20 12051007 12051008 T A 21 INTERGENIC homozygous 45430043 20 12051031 12051032 C T 16 INTERGENIC homozygous 45430044 20 12051299 12051300 C G 8 INTERGENIC heterozygous 45430045 20 12051336 12051337 C T 4 INTERGENIC homozygous 45430046 20 12051339 12051340 G T 6 INTERGENIC homozygous 45430047 20 12051358 12051359 T C 7 INTERGENIC possibly homozygous 45430048 20 12051385 12051386 G C 13 INTERGENIC homozygous 45430049 20 12051596 12051597 A G 24 INTERGENIC possibly homozygous 45430050 20 12052060 12052061 T C 25 INTERGENIC homozygous 45430051 20 12052169 12052170 C T 20 INTERGENIC possibly homozygous 45430052 20 12052249 12052250 A G 29 INTERGENIC possibly homozygous 45430053 20 12052308 12052309 T C 20 INTERGENIC possibly homozygous 45430054 20 12052354 12052355 A G 11 INTERGENIC possibly homozygous 45430055 20 12052367 12052368 G A 6 INTERGENIC heterozygous 45430056 20 12052395 12052396 G A 13 INTERGENIC homozygous 45430057 20 12052419 12052420 G A 20 INTERGENIC homozygous 45430058 20 12052659 12052660 T C 11 INTERGENIC homozygous 45430064 20 12052687 12052688 C T 9 INTERGENIC homozygous 45430065 20 12052693 12052694 C T 7 INTERGENIC homozygous 45430066 20 12052706 12052707 G A 1 INTERGENIC homozygous 45430067 20 12052709 12052711 CC -- 1 INTERGENIC homozygous 45819423 20 12052711 12052712 T TGG 1 INTERGENIC homozygous 45819424 20 12052735 12052737 AA -- 5 INTERGENIC homozygous 45430069 20 12052758 12052759 C T 4 INTERGENIC homozygous 45430070 20 12052765 12052766 C A 2 INTERGENIC homozygous 45430071 20 12052770 12052771 C T 1 INTERGENIC homozygous 45430072 20 12052784 12052785 G A 1 INTERGENIC homozygous 45430074 20 12052793 12052794 C T 1 INTERGENIC homozygous 45430075 20 12052799 12052803 TGAA ---- 2 INTERGENIC heterozygous 45819425 20 12052803 12052804 C CCT 2 INTERGENIC heterozygous 45819426 20 12052883 12052884 G A 17 GENIC possibly homozygous 45430078 20 12052919 12052920 G A 16 GENIC possibly homozygous 45430079 20 12053786 12053792 CACACG ------ 3 GENIC heterozygous 45430096 20 12053820 12053821 G A 12 GENIC possibly homozygous 45430097 20 12054006 12054007 C T 8 GENIC possibly homozygous 45430098 20 12054013 12054014 A G 6 GENIC homozygous 45430099 20 12054032 12054033 G C 5 GENIC homozygous 45430100 20 12054034 12054035 C T 5 GENIC homozygous 45430101 20 12069576 12069577 G A 18 INTERGENIC homozygous 45430105 20 12069606 12069607 C T 10 INTERGENIC homozygous 45430106 20 12069633 12069634 T C 8 INTERGENIC homozygous 45430107 20 12069636 12069637 T C 8 INTERGENIC homozygous 45430108 20 12069732 12069733 A G 3 INTERGENIC homozygous 45430109 20 12070464 12070465 A G 14 INTERGENIC possibly homozygous 45430110 20 12070825 12070826 A AGAAC 8 INTERGENIC homozygous 45430111 20 12070894 12070895 C T 22 INTERGENIC homozygous 45430112 20 12071561 12071562 C G 10 INTERGENIC homozygous 45430113 20 12071578 12071579 C A 16 INTERGENIC homozygous 45430114 20 12071755 12071756 T - 8 INTERGENIC homozygous 45430115 20 12071783 12071784 C - 5 INTERGENIC homozygous 45430116 20 12071850 12071851 T TA 11 GENIC homozygous 45430122 20 12071882 12071883 T C 18 GENIC heterozygous 45430123 20 12071883 12071884 G A 18 GENIC heterozygous 45430124 20 12072129 12072130 G A 9 GENIC heterozygous 45430125 20 12072140 12072141 A G 12 GENIC heterozygous 45430126 20 12072197 12072198 A - 11 GENIC possibly homozygous 45430127 20 12072198 12072199 C G 11 GENIC possibly homozygous 45897549 20 12072245 12072246 A G 23 GENIC heterozygous 45430128 20 12072246 12072247 C T 23 GENIC heterozygous 45430129 20 12072315 12072316 C T 18 GENIC possibly homozygous 45430130 20 12072354 12072355 C T 11 GENIC homozygous 45430131 20 12072376 12072377 C T 1 GENIC homozygous 45897550 20 12072377 12072378 T G 1 GENIC homozygous 45897551 20 12072381 12072382 C A 2 GENIC homozygous 45430132 20 12072398 12072399 G A 7 GENIC homozygous 45430133 20 12072402 12072403 C T 7 GENIC homozygous 45430134 20 12072453 12072464 CTTGGTGGTCT ----------- 7 GENIC heterozygous 45430135 20 12072600 12072601 A G 8 GENIC possibly homozygous 45430136 20 12072605 12072606 A G 6 GENIC heterozygous 45430137 20 12072708 12072709 C A 28 GENIC possibly homozygous 45430138 20 12072847 12072848 T C 26 GENIC homozygous 45430139 20 12073141 12073142 G T 25 GENIC possibly homozygous 45430140 20 12073350 12073351 C - 20 GENIC homozygous 45430141 20 12073378 12073379 T C 21 GENIC homozygous 45430142 20 12073417 12073418 A ACTGGCACT 4 GENIC homozygous 45430143 20 12073671 12073672 T C 14 GENIC homozygous 45430144 20 12073737 12073738 A G 10 GENIC homozygous 45430145 20 12073756 12073757 G A 10 GENIC homozygous 45430146 20 12075390 12075391 C G 14 GENIC possibly homozygous 45430154 20 12073798 12073799 C G 27 GENIC possibly homozygous 45430147 20 12075331 12075332 T C 22 GENIC homozygous 45430152 20 12075380 12075381 T C 12 GENIC homozygous 45430153 20 12075878 12075879 T C 21 INTERGENIC homozygous 45430155 20 12076068 12076069 C T 12 INTERGENIC homozygous 45430156 20 12076073 12076074 C T 9 INTERGENIC homozygous 45430157 20 12077367 12077368 C - 14 INTERGENIC possibly homozygous 45430162 20 12078697 12078698 C CA 2 INTERGENIC homozygous 45430163 20 12078705 12078706 A - 2 INTERGENIC heterozygous 45430164 20 12078816 12078817 T C 16 INTERGENIC homozygous 45430165 20 12079645 12079646 C T 14 INTERGENIC homozygous 45430166 20 12080775 12080776 G A 21 INTERGENIC homozygous 45430171 20 12080850 12080851 T C 8 INTERGENIC homozygous 45430172 20 12080854 12080855 G A 6 INTERGENIC homozygous 45430173 20 12080862 12080863 C T 9 INTERGENIC homozygous 45430174 20 12081010 12081011 A G 23 INTERGENIC possibly homozygous 45430175 20 12081048 12081049 G A 7 INTERGENIC homozygous 45430176 20 12081057 12081058 C T 4 INTERGENIC homozygous 45430177 20 12081065 12081066 T C 7 INTERGENIC possibly homozygous 45430178 20 12081066 12081067 G A 7 INTERGENIC possibly homozygous 45430179 20 12081176 12081177 C T 21 INTERGENIC homozygous 45430180 20 12081933 12081934 A T 12 INTERGENIC heterozygous 45430181 20 12082600 12082601 A - 8 INTERGENIC homozygous 45819430 20 12087660 12087661 A G 19 INTERGENIC possibly homozygous 45430193 20 12084312 12084313 C T 6 INTERGENIC homozygous 45430186 20 12086274 12086275 G A 8 INTERGENIC possibly homozygous 45430188 20 12086585 12086586 A G 18 INTERGENIC possibly homozygous 45430192 20 12088994 12088995 C G 17 INTERGENIC heterozygous 45430194 20 12089050 12089051 T C 28 INTERGENIC possibly homozygous 45430195 20 12090882 12090883 C T 21 GENIC possibly homozygous 45430197 20 12090998 12090999 C CCAAAA 3 GENIC homozygous 45430198 20 12091539 12091540 A AGGGATCACT 1 GENIC homozygous 45430199 20 12091920 12091921 C A 28 GENIC possibly homozygous 45430200 20 12092753 12092754 A G 3 GENIC homozygous 45430201 20 12092821 12092822 C T 21 GENIC possibly homozygous 45430202 20 12092891 12092892 A G 16 GENIC possibly homozygous 45430203 20 12093032 12093033 C A 19 GENIC homozygous 45430204 20 12093283 12093284 A G 24 GENIC possibly homozygous 45430205 20 12093429 12093430 T C 8 GENIC homozygous 45430206 20 12093508 12093510 TT -- 6 GENIC heterozygous 45430207 20 12093715 12093716 G A 25 GENIC homozygous 45430208 20 12093803 12093805 CA -- 10 GENIC heterozygous 45430209 20 12093994 12093995 C T 33 GENIC possibly homozygous 45430210 20 12094042 12094043 A ACACACATGCACACACATATG 3 GENIC homozygous 45897552 20 12094226 12094227 A AC 18 GENIC possibly homozygous 45430213 20 12094268 12094269 A AT 13 GENIC heterozygous 45430214 20 12094951 12094952 A G 19 GENIC possibly homozygous 45430216 20 12095450 12095451 A G 15 GENIC possibly homozygous 45430218