chr	start	stop	reference nuc	variant nuc	depth	genic status	zygosity	variant ID
20	5536308	5536309	A	G	18	GENIC	possibly homozygous	45387458
20	5536977	5536978	T	-	8	INTERGENIC	homozygous	45731844
20	5539552	5539553	G	A	2	INTERGENIC	heterozygous	45731848
20	5539586	5539587	G	A	16	INTERGENIC	possibly homozygous	45731849
20	5539847	5539848	C	A	4	INTERGENIC	homozygous	45862122
20	5539848	5539849	A	C	4	INTERGENIC	homozygous	45862123
20	5539874	5539875	A	C	4	INTERGENIC	homozygous	45862124
20	5540242	5540243	C	G	16	INTERGENIC	homozygous	45731850
20	5540393	5540397	AAAT	----	12	INTERGENIC	homozygous	45731851
20	5541355	5541356	A	-	11	INTERGENIC	homozygous	45387482
20	5541390	5541391	A	G	6	INTERGENIC	homozygous	45387486
20	5541456	5541457	C	T	6	INTERGENIC	heterozygous	45387488
20	5541545	5541546	G	C	2	INTERGENIC	homozygous	45387494
20	5542394	5542395	G	C	4	INTERGENIC	homozygous	45731855
20	5542416	5542417	A	G	6	INTERGENIC	homozygous	45731856
20	5542493	5542503	TATATATATA	----------	1	INTERGENIC	homozygous	45731857
20	5542586	5542587	G	-	11	INTERGENIC	homozygous	45731859
20	5542791	5542792	G	A	5	INTERGENIC	homozygous	45731860
20	5542823	5542824	G	C	10	INTERGENIC	possibly homozygous	45731861
20	5542833	5542834	A	G	9	INTERGENIC	homozygous	45731862
20	5542876	5542877	A	C	5	INTERGENIC	homozygous	45731863
20	5542994	5542995	C	G	10	INTERGENIC	possibly homozygous	45731865
20	5543102	5543103	C	A	7	INTERGENIC	heterozygous	45862126
20	5543198	5543199	G	GAC	16	INTERGENIC	possibly homozygous	45731866
20	5543285	5543286	T	G	18	INTERGENIC	homozygous	45731867
20	5543302	5543303	T	C	16	INTERGENIC	homozygous	45731868
20	5543390	5543391	A	G	15	INTERGENIC	homozygous	45731869
20	5543806	5543807	T	-	6	INTERGENIC	homozygous	45731870
20	5543864	5543865	T	C	12	INTERGENIC	homozygous	45731871
20	5543886	5543887	G	A	17	INTERGENIC	homozygous	45731872
20	5544215	5544216	G	T	23	INTERGENIC	possibly homozygous	45731875
20	5544312	5544313	C	T	15	INTERGENIC	possibly homozygous	45731876
20	5544416	5544417	G	C	2	INTERGENIC	homozygous	45731877
20	5544438	5544439	T	C	6	INTERGENIC	homozygous	45731878
20	5544511	5544515	AACC	----	7	INTERGENIC	homozygous	45731879
20	5544764	5544765	G	T	20	INTERGENIC	homozygous	45731880
20	5544808	5544809	C	T	19	INTERGENIC	homozygous	45731881
20	5544853	5544857	GATT	----	1	INTERGENIC	homozygous	45731882
20	5545594	5545595	G	GT	16	INTERGENIC	homozygous	45731886
20	5545624	5545625	T	C	25	INTERGENIC	possibly homozygous	45731887
20	5545701	5545702	C	G	35	INTERGENIC	possibly homozygous	45731888
20	5545798	5545799	C	A	7	INTERGENIC	possibly homozygous	45731889
20	5545845	5545846	A	G	23	INTERGENIC	possibly homozygous	45731890
20	5546032	5546033	G	A	27	INTERGENIC	homozygous	45731891
20	5546171	5546172	C	T	10	INTERGENIC	homozygous	45731892
20	5546270	5546271	G	A	10	INTERGENIC	heterozygous	45731893
20	5546277	5546278	G	GT	3	INTERGENIC	heterozygous	45387506
20	5546278	5546280	TT	--	3	INTERGENIC	heterozygous	45731894
20	5546472	5546473	C	T	3	INTERGENIC	homozygous	45731895
20	5546785	5546786	A	G	7	INTERGENIC	possibly homozygous	45731897
20	5547076	5547077	T	C	17	INTERGENIC	possibly homozygous	45731898
20	5547147	5547148	T	C	2	INTERGENIC	homozygous	45731899
20	5547202	5547203	A	G	15	INTERGENIC	possibly homozygous	45731901
20	5547262	5547263	A	-	16	INTERGENIC	homozygous	45731902
20	5547458	5547459	C	G	15	INTERGENIC	possibly homozygous	45731903
20	5547639	5547640	T	-	1	INTERGENIC	homozygous	45731908
20	5547888	5547889	C	T	12	INTERGENIC	homozygous	45731912
20	5547913	5547914	T	C	18	INTERGENIC	heterozygous	45731914
20	5548179	5548180	G	A	7	INTERGENIC	possibly homozygous	45731916
20	5548202	5548203	T	C	5	INTERGENIC	homozygous	45731918
20	5548216	5548217	T	C	5	INTERGENIC	homozygous	45731920
20	5548220	5548221	G	A	5	INTERGENIC	homozygous	45731921
20	5548242	5548243	A	T	11	INTERGENIC	homozygous	45731923
20	5548264	5548265	G	T	8	INTERGENIC	homozygous	45731924
20	5548277	5548278	T	C	1	INTERGENIC	homozygous	45731926
20	5548346	5548347	C	T	18	INTERGENIC	homozygous	45731932
20	5548459	5548460	A	AT	11	INTERGENIC	homozygous	45731933
20	5548513	5548514	C	T	6	INTERGENIC	homozygous	45731934
20	5548525	5548526	G	A	4	INTERGENIC	homozygous	45731936
20	5548568	5548569	C	T	4	INTERGENIC	homozygous	45731938
20	5548573	5548574	A	G	4	INTERGENIC	homozygous	45731939
20	5548594	5548595	A	T	13	INTERGENIC	heterozygous	45731941
20	5548679	5548680	A	G	11	INTERGENIC	homozygous	45731942
20	5548796	5548797	T	C	17	INTERGENIC	possibly homozygous	45731944
20	5548830	5548831	C	T	17	INTERGENIC	homozygous	45731945
20	5548932	5549058	TGATGTACGCTTTCTTTTTTTTTTTTTTTTTTTTTTCTTTTTTCTTTTTTTCGGAGCTGGGGACCGAACCCAGGGCCTTGCGCTTGCTAGGCAAGCGCTCTACCACTGAGCTAAATCCCCAACCCC	------------------------------------------------------------------------------------------------------------------------------	1	INTERGENIC	homozygous	45862137
20	5549310	5549311	T	G	26	INTERGENIC	homozygous	45731947
20	5549402	5549403	G	T	21	INTERGENIC	homozygous	45731948
20	5549485	5549486	C	T	16	INTERGENIC	homozygous	45731950
20	5549490	5549491	C	T	11	INTERGENIC	homozygous	45731952
20	5549526	5549527	G	A	28	INTERGENIC	homozygous	45731953
20	5549705	5549706	C	T	9	INTERGENIC	homozygous	45731955
20	5549708	5549709	G	A	12	INTERGENIC	heterozygous	45731956
20	5549883	5549886	GAA	---	4	INTERGENIC	heterozygous	45731959
20	5549886	5549887	G	T	5	INTERGENIC	heterozygous	45862138
20	5549991	5549992	A	G	25	INTERGENIC	homozygous	45731961
20	5550208	5550209	C	T	19	INTERGENIC	possibly homozygous	45731963
20	5551213	5551214	G	T	26	INTERGENIC	possibly homozygous	45731964
20	5551300	5551301	A	C	10	INTERGENIC	homozygous	45731966
20	5551303	5551304	C	A	10	INTERGENIC	homozygous	45731967
20	5551750	5551751	C	T	20	INTERGENIC	homozygous	45731969
20	5552014	5552015	T	C	11	INTERGENIC	homozygous	45731971
20	5552356	5552364	ATCCAGGT	--------	7	INTERGENIC	heterozygous	45731974
20	5552567	5552676	AAAGCCTTGGGAGAGGGGCTGGGGATTTAGCTCAGTGGTAGAGCACTTACCTAGGAAGCGCAAGGCCCTGGGTTCGGTCCCCAGCTCCGGAAAAAAAAAAAAAAAAAAA	-------------------------------------------------------------------------------------------------------------	16	INTERGENIC	heterozygous	45818546
20	5552912	5552913	G	A	19	INTERGENIC	homozygous	45731975
20	5553441	5553442	G	A	19	INTERGENIC	homozygous	45731977
20	5553659	5553660	A	ACTGTCTGTCTGT	1	INTERGENIC	homozygous	45862139
20	5554287	5554288	A	G	17	INTERGENIC	possibly homozygous	45731990
20	5554571	5554572	G	A	3	INTERGENIC	homozygous	45731991
20	5555154	5555155	A	G	4	INTERGENIC	homozygous	45731996
20	5555255	5555256	G	A	11	INTERGENIC	homozygous	45731998
20	5555359	5555360	T	C	23	INTERGENIC	homozygous	45732000
20	5555393	5555394	G	A	21	INTERGENIC	possibly homozygous	45732001
20	5555493	5555494	C	G	22	INTERGENIC	possibly homozygous	45732003
20	5555658	5555659	G	A	14	INTERGENIC	homozygous	45732004
20	5556589	5556590	C	T	4	INTERGENIC	heterozygous	45732006
20	5557011	5557012	G	T	8	INTERGENIC	possibly homozygous	45732007
20	5557063	5557064	G	GA	6	INTERGENIC	homozygous	45387535
20	5557275	5557276	A	G	21	INTERGENIC	possibly homozygous	45732009
20	5557496	5557499	AGG	---	12	INTERGENIC	heterozygous	45732011
20	5557998	5557999	T	A	11	INTERGENIC	heterozygous	45732014
20	5558420	5558421	A	G	20	INTERGENIC	homozygous	45732016
20	5558807	5558808	A	AT	1	INTERGENIC	homozygous	45732019
20	5560271	5560272	G	GA	4	INTERGENIC	heterozygous	45732022
20	5560322	5560323	A	T	1	INTERGENIC	homozygous	45862142
20	5560322	5560323	A	-	1	INTERGENIC	homozygous	45862143
20	5560834	5560835	T	A	11	GENIC	possibly homozygous	45732027
20	5561072	5561073	T	G	27	GENIC	homozygous	45732029
20	5561101	5561102	T	C	20	GENIC	possibly homozygous	45732031
20	5561140	5561141	G	A	19	GENIC	homozygous	45732032
20	5561160	5561161	G	GGA	18	GENIC	homozygous	45732034
20	5561198	5561199	C	T	19	GENIC	heterozygous	45732036
20	5561484	5561485	G	A	19	GENIC	possibly homozygous	45732037
20	5561593	5561594	C	G	11	GENIC	homozygous	45732039
20	5561698	5561699	A	G	15	INTERGENIC	homozygous	45387545
20	5561721	5561722	G	A	11	INTERGENIC	homozygous	45732040
20	5561724	5561725	T	TGTGTGCCGCCC	10	INTERGENIC	homozygous	45732042
20	5562852	5562853	A	G	18	INTERGENIC	possibly homozygous	45732045
20	5563415	5563416	G	A	21	INTERGENIC	possibly homozygous	45732048
20	5563612	5563613	A	C	10	INTERGENIC	homozygous	45732050
20	5564286	5564287	G	A	18	INTERGENIC	homozygous	45732053
20	5563687	5563688	A	-	3	INTERGENIC	homozygous	45387553
20	5563847	5563848	T	C	24	INTERGENIC	possibly homozygous	45732052
20	5564069	5564070	T	-	2	INTERGENIC	heterozygous	45862146
20	5564355	5564356	A	G	20	INTERGENIC	homozygous	45732055