chr start stop reference nuc variant nuc depth genic status zygosity variant ID 2 53149629 53149630 A G 14 INTERGENIC homozygous 58824849 2 53149706 53149707 A T 17 INTERGENIC homozygous 59805637 2 53150467 53150468 G A 11 INTERGENIC homozygous 59805639 2 53150503 53150504 C T 8 INTERGENIC homozygous 58824852 2 53150506 53150507 C T 8 INTERGENIC homozygous 58824853 2 53150507 53150508 A G 8 INTERGENIC homozygous 58824854 2 53150577 53150578 G T 10 INTERGENIC homozygous 59805640 2 53150583 53150584 C T 10 INTERGENIC homozygous 59805641 2 53150592 53150593 C T 13 INTERGENIC homozygous 59805642 2 53150663 53150664 G GA 10 INTERGENIC heterozygous 58824857 2 53153315 53153316 T C 15 INTERGENIC homozygous 59805649 2 53153419 53153420 G A 18 INTERGENIC homozygous 59805650 2 53153443 53153444 C T 15 INTERGENIC homozygous 59805651 2 53160011 53160012 G A 11 INTERGENIC homozygous 58824876 2 53164071 53164072 A AT 10 INTERGENIC homozygous 58824884 2 53164874 53164875 C T 17 INTERGENIC homozygous 59805653 2 53164978 53164979 G GTA 10 INTERGENIC homozygous 58824886 2 53165155 53165156 A G 13 INTERGENIC homozygous 58824887 2 53168528 53168529 A G 21 INTERGENIC homozygous 58824894 2 53173627 53173628 C CT 13 INTERGENIC homozygous 59805655 2 53173828 53173829 G T 16 INTERGENIC homozygous 59805656 2 53173893 53173894 G A 12 INTERGENIC homozygous 59805657 2 53173948 53173949 C CTAAGCCTA 7 INTERGENIC homozygous 59805658 2 53174309 53174310 T C 7 INTERGENIC homozygous 58824905 2 53174725 53174726 A C 14 INTERGENIC homozygous 58824906 2 53174774 53174775 A C 7 INTERGENIC homozygous 58824912 2 53174745 53174746 A C 10 INTERGENIC homozygous 58824907 2 53174746 53174747 G T 9 INTERGENIC homozygous 58824908 2 53174758 53174759 A C 5 INTERGENIC homozygous 58824909 2 53174762 53174763 A C 5 INTERGENIC homozygous 58824910 2 53174764 53174765 A C 5 INTERGENIC homozygous 58824911 2 53174779 53174780 A T 7 INTERGENIC homozygous 58824913 2 53174789 53174790 A T 7 INTERGENIC homozygous 58824914 2 53174796 53174797 G C 4 INTERGENIC homozygous 58824915 2 53174799 53174800 A T 4 INTERGENIC homozygous 58824916 2 53174801 53174802 G C 4 INTERGENIC homozygous 58824917 2 53175791 53175792 C T 8 INTERGENIC homozygous 58824931 2 53176068 53176069 A G 9 INTERGENIC homozygous 58824934 2 53176120 53176121 G A 13 INTERGENIC homozygous 59805660 2 53179819 53179820 T C 8 INTERGENIC homozygous 59805661 2 53180216 53180217 G A 15 INTERGENIC homozygous 59805662 2 53180504 53180505 T G 12 INTERGENIC homozygous 59805663 2 53180649 53180661 TCCTCCTCCTCC ------------ 8 INTERGENIC homozygous 59805664 2 53180872 53180873 A G 15 INTERGENIC homozygous 58824936 2 53181009 53181010 T C 22 INTERGENIC homozygous 58824937 2 53181596 53181597 A G 15 INTERGENIC homozygous 59805665 2 53182007 53182008 C T 14 INTERGENIC homozygous 59805666 2 53182988 53182989 C T 14 INTERGENIC homozygous 59805667 2 53183991 53183992 C A 8 INTERGENIC homozygous 58824943 2 53191517 53191518 T G 12 INTERGENIC homozygous 58824950 2 53191781 53191782 A C 15 INTERGENIC homozygous 59805669 2 53194834 53194835 C A 7 INTERGENIC homozygous 59805670 2 53194943 53194944 C A 8 INTERGENIC homozygous 59805671 2 53195512 53195514 TT -- 10 INTERGENIC homozygous 58824957 2 53196671 53196672 T C 11 INTERGENIC homozygous 59805672 2 53196877 53196878 A AC 7 INTERGENIC homozygous 58824979 2 53197466 53197467 T C 18 INTERGENIC homozygous 58824981 2 53198732 53198733 T C 8 INTERGENIC homozygous 58824987 2 53198960 53198961 G A 10 INTERGENIC homozygous 59805675 2 53199351 53199352 T C 16 INTERGENIC homozygous 58824992 2 53199373 53199374 C CA 10 INTERGENIC homozygous 58824994 2 53201823 53201824 C T 14 INTERGENIC homozygous 59805676 2 53202119 53202120 T G 12 INTERGENIC homozygous 59805677 2 53202174 53202175 G A 13 INTERGENIC homozygous 59805678 2 53203391 53203392 T C 13 INTERGENIC homozygous 58825017 2 53203980 53203981 C T 18 INTERGENIC homozygous 59805679 2 53205216 53205217 A - 8 INTERGENIC homozygous 58825023 2 53205760 53205768 TTAGATCG -------- 9 INTERGENIC homozygous 58825026 2 53210438 53210439 C T 12 INTERGENIC homozygous 59805680 2 53211131 53211132 G C 11 INTERGENIC homozygous 59805681 2 53211161 53211167 AGAGAG ------ 10 INTERGENIC homozygous 59805682 2 53211210 53211211 C T 8 INTERGENIC homozygous 59805683 2 53212170 53212171 C G 21 INTERGENIC homozygous 59805685 2 53212229 53212230 C T 17 INTERGENIC homozygous 60443839 2 53212231 53212232 T A 17 INTERGENIC homozygous 60443840 2 53212233 53212234 G T 17 INTERGENIC homozygous 59805686 2 53213834 53213835 A T 10 INTERGENIC homozygous 59805687 2 53214018 53214019 G A 16 INTERGENIC homozygous 59805688 2 53214407 53214408 T C 16 INTERGENIC homozygous 59805689 2 53214412 53214413 T C 13 INTERGENIC homozygous 58825046 2 53214457 53214458 A - 10 INTERGENIC homozygous 58825047 2 53215046 53215047 A - 17 INTERGENIC homozygous 58825050 2 53215967 53215968 C G 17 GENIC homozygous 59805690 2 53217786 53217787 A G 18 GENIC homozygous 58825055 2 53217868 53217869 A G 18 GENIC homozygous 58825056 2 53217901 53217902 T C 11 GENIC homozygous 58825057 2 53218917 53218918 A G 13 GENIC homozygous 59805691 2 53219216 53219217 A G 16 GENIC homozygous 58825058 2 53219359 53219360 T G 20 GENIC homozygous 58825059 2 53220660 53220661 C T 18 GENIC homozygous 59805692 2 53223234 53223235 T C 13 GENIC homozygous 58825063 2 53230502 53230503 A T 21 GENIC homozygous 58825073 2 53224716 53224717 A C 13 GENIC homozygous 58825065 2 53225117 53225118 T C 13 GENIC homozygous 59805693 2 53225661 53225662 T C 11 GENIC homozygous 59805694 2 53226258 53226259 A AAC 15 GENIC homozygous 58825067 2 53230329 53230330 A G 15 GENIC homozygous 58825072 2 53212226 53212227 A G 17 INTERGENIC homozygous 60324743 2 53230773 53230774 A T 15 GENIC homozygous 58825074 2 53232522 53232524 TG -- 22 GENIC homozygous 59805695 2 53232854 53232855 G GC 12 GENIC homozygous 58825076 2 53232872 53232873 C - 15 GENIC homozygous 58825077 2 53233360 53233361 G A 16 GENIC homozygous 58825078 2 53233401 53233405 AAAC ---- 11 GENIC homozygous 59805697 2 53234033 53234034 C T 14 GENIC homozygous 59805698 2 53234352 53234353 C A 12 GENIC homozygous 59805699 2 53234955 53234956 T C 7 GENIC homozygous 58825083 2 53235318 53235319 T A 16 GENIC homozygous 59805700 2 53239870 53239871 C T 9 GENIC homozygous 59805701 2 53240536 53240537 A G 13 GENIC homozygous 58825091 2 53241088 53241089 A T 19 GENIC homozygous 59805702 2 53241256 53241257 A G 15 GENIC homozygous 58825095 2 53241415 53241416 G A 19 GENIC homozygous 58825096 2 53241930 53241931 G T 16 GENIC homozygous 59805705 2 53242571 53242572 T TA 16 GENIC homozygous 58825103 2 53242577 53242578 C T 16 GENIC homozygous 58825104 2 53242579 53242580 A G 16 GENIC homozygous 58825105 2 53243657 53243658 C - 20 GENIC homozygous 59805706 2 53243696 53243697 T C 21 GENIC homozygous 58825108 2 53244974 53244975 G T 21 GENIC homozygous 58825110 2 53245199 53245200 C T 13 GENIC homozygous 59805707 2 53245249 53245251 AG -- 8 GENIC homozygous 58825112 2 53245978 53245979 G A 18 GENIC homozygous 59805708 2 53246036 53246037 T A 14 GENIC homozygous 58825114 2 53246232 53246233 G A 30 GENIC homozygous 59805709 2 53248127 53248128 C T 18 GENIC homozygous 59805711 2 53248186 53248187 C T 11 GENIC homozygous 59805712 2 53248540 53248541 A G 6 GENIC homozygous 58825118 2 53248564 53248565 A ATG 7 GENIC homozygous 59695232 2 53248619 53248620 G T 9 GENIC homozygous 59805715 2 53252777 53252778 A T 10 GENIC homozygous 58825124 2 53256496 53256497 C CAGA 14 GENIC homozygous 58825152 2 53257057 53257058 T C 12 GENIC homozygous 59805735 2 53257466 53257467 C T 12 GENIC homozygous 58825154 2 53260488 53260489 A C 10 GENIC homozygous 59805736 2 53262798 53262799 C T 10 GENIC homozygous 59805739 2 53263261 53263262 A G 22 GENIC homozygous 58825162 2 53263534 53263535 C - 14 GENIC homozygous 58825164 2 53263594 53263595 T C 22 GENIC homozygous 58825165 2 53264932 53264933 A C 28 GENIC homozygous 58825167 2 53265695 53265703 CCACCCAT -------- 8 GENIC homozygous 59805741 2 53266207 53266219 CTTTCCTTCTTT ------------ 17 GENIC homozygous 59805745 2 53269657 53269658 A G 12 GENIC homozygous 59805749 2 53270377 53270378 C T 14 GENIC homozygous 59805750 2 53271122 53271123 A G 11 GENIC homozygous 59805751 2 53274279 53274281 TG -- 12 GENIC homozygous 59805752 2 53274639 53274640 C T 7 GENIC homozygous 59805753 2 53275139 53275140 C T 14 GENIC homozygous 59805754 2 53275352 53275353 A G 8 GENIC homozygous 58825188 2 53275986 53275987 T C 10 GENIC homozygous 59805755 2 53277446 53277447 C T 10 GENIC homozygous 59805764 2 53277626 53277627 G A 21 GENIC homozygous 59805765 2 53277914 53277915 C CA 20 GENIC homozygous 59805766 2 53278506 53278507 G A 22 GENIC homozygous 58825192 2 53278889 53278890 A - 12 GENIC homozygous 59695254 2 53279458 53279459 T A 12 GENIC homozygous 59805767 2 53279683 53279684 T TC 14 GENIC homozygous 58825193 2 53279690 53279691 T C 12 GENIC homozygous 59805768 2 53279969 53279970 C G 11 GENIC homozygous 59805769 2 53280332 53280333 G A 21 GENIC homozygous 59805770 2 53280403 53280404 C T 9 GENIC homozygous 59805771 2 53281065 53281066 C T 11 GENIC homozygous 59805773 2 53281075 53281076 T C 13 GENIC homozygous 58825196 2 53283287 53283288 G A 9 GENIC homozygous 59805779 2 53281559 53281560 T TA 14 GENIC homozygous 59805774 2 53282048 53282049 T C 12 GENIC homozygous 58825197 2 53282296 53282297 G - 12 GENIC homozygous 59805777 2 53283268 53283269 A G 9 GENIC homozygous 59805778 2 53283294 53283299 GAGGA ----- 8 GENIC homozygous 58825198 2 53283911 53283912 A G 22 GENIC homozygous 59805782 2 53284641 53284642 T C 21 GENIC homozygous 59805783 2 53286255 53286256 T C 9 GENIC homozygous 59805786 2 53286582 53286583 T C 11 GENIC homozygous 59805787 2 53286609 53286610 C T 14 GENIC homozygous 59805788 2 53287549 53287550 T A 20 GENIC homozygous 59805789 2 53287951 53287957 TTCTGG ------ 18 GENIC homozygous 59805790 2 53288559 53288560 C - 15 GENIC homozygous 59805791 2 53288765 53288766 C T 21 GENIC homozygous 59805792 2 53290392 53290393 C T 8 GENIC homozygous 59805794 2 53290746 53290747 C - 9 GENIC homozygous 58825208 2 53291790 53291791 C - 10 GENIC homozygous 59805796 2 53292764 53292765 T C 7 GENIC homozygous 58825209 2 53292932 53292933 C T 15 GENIC homozygous 59805798 2 53293556 53293557 G GGAA 13 GENIC homozygous 58825210 2 53293953 53293954 T C 13 GENIC homozygous 59805799 2 53294064 53294065 A G 11 GENIC homozygous 59805800 2 53294425 53294426 C T 10 GENIC homozygous 59805801 2 53294426 53294427 G C 10 GENIC homozygous 59805802 2 53295106 53295107 G A 15 GENIC homozygous 59805803 2 53295404 53295405 C G 17 GENIC homozygous 59805804 2 53296860 53296861 T C 19 GENIC homozygous 59805805 2 53298690 53298691 G A 16 GENIC homozygous 59805806 2 53300185 53300186 C T 10 GENIC homozygous 59805809 2 53302859 53302860 T C 14 GENIC homozygous 58825215 2 53303082 53303083 C CA 12 GENIC homozygous 59805810 2 53303387 53303388 A G 14 GENIC homozygous 59805811 2 53304234 53304235 A G 19 GENIC homozygous 58825217 2 53304499 53304500 A C 14 GENIC homozygous 59805812 2 53305088 53305089 A - 14 GENIC homozygous 59805813 2 53307657 53307658 A G 14 GENIC homozygous 58825221 2 53308379 53308380 A - 16 GENIC homozygous 59805817 2 53308558 53308559 G T 22 GENIC homozygous 58825225 2 53308702 53308703 G GT 16 GENIC homozygous 58825226 2 53309266 53309267 G A 25 GENIC homozygous 58825227 2 53309607 53309608 T G 14 GENIC homozygous 59805818 2 53309932 53309933 T C 14 GENIC homozygous 58825228 2 53311599 53311600 A AC 13 GENIC homozygous 59805819 2 53311643 53311644 C G 18 GENIC homozygous 58825229 2 53311893 53311894 C CA 11 GENIC homozygous 58825231 2 53312286 53312287 T TA 8 GENIC heterozygous 58825232 2 53315477 53315478 T G 11 GENIC homozygous 59805823 2 53315942 53315943 G A 21 GENIC homozygous 59805824 2 53316130 53316131 G A 17 GENIC homozygous 59805825 2 53316729 53316730 G A 20 GENIC homozygous 59805826 2 53317072 53317073 C T 16 GENIC homozygous 59805827 2 53317080 53317081 A G 15 GENIC homozygous 58825238 2 53318348 53318349 C T 15 GENIC homozygous 59805829 2 53319086 53319087 C CT 13 GENIC homozygous 59805830 2 53322921 53322922 T C 15 GENIC homozygous 59805832 2 53323350 53323351 A G 20 GENIC homozygous 59805833 2 53323803 53323804 G A 9 GENIC homozygous 59805834 2 53327045 53327046 C G 12 GENIC homozygous 59805838 2 53323988 53323989 T C 15 GENIC homozygous 58825242 2 53324957 53324958 A G 18 GENIC homozygous 59805835 2 53326635 53326636 G T 9 GENIC homozygous 59805836 2 53328516 53328517 T TC 8 GENIC homozygous 59805840 2 53329152 53329153 T C 13 GENIC homozygous 58825249 2 53329219 53329220 A AT 13 GENIC homozygous 59805843 2 53330895 53330896 A ACTTTT 18 GENIC homozygous 58825251 2 53331942 53331943 C G 11 GENIC homozygous 59805844 2 53333023 53333024 C T 15 GENIC homozygous 59805845 2 53334309 53334310 T C 17 GENIC homozygous 58825254 2 53336919 53336920 C T 16 GENIC homozygous 59805849 2 53338239 53338240 G A 16 GENIC homozygous 58825257 2 53338662 53338663 T A 8 GENIC homozygous 58825258 2 53340813 53340814 C T 14 GENIC homozygous 58825260 2 53341505 53341506 C T 16 GENIC homozygous 58825262 2 53342007 53342008 T TG 13 GENIC homozygous 58825263 2 53342019 53342020 A G 13 GENIC homozygous 58825264 2 53342337 53342338 T C 14 GENIC homozygous 58825265 2 53342562 53342563 G C 26 GENIC homozygous 58825266 2 53343229 53343230 G T 19 GENIC homozygous 58825268 2 53344662 53344663 G A 8 GENIC heterozygous 59805851 2 53344893 53344894 A C 18 GENIC homozygous 58825281 2 53345592 53345593 A G 9 GENIC homozygous 60443849 2 53345671 53345672 T A 12 GENIC homozygous 58825286 2 53345695 53345696 C - 9 GENIC homozygous 59805855 2 53345814 53345815 T C 21 GENIC homozygous 58825287 2 53346079 53346080 T C 10 GENIC homozygous 58825288 2 53346130 53346131 G A 14 GENIC homozygous 58825289 2 53346209 53346210 C T 13 GENIC homozygous 58825290 2 53346212 53346213 T A 13 GENIC homozygous 58825291 2 53346231 53346232 A G 15 GENIC homozygous 58825292 2 53346237 53346238 T G 14 GENIC homozygous 58825293 2 53346375 53346376 A G 8 GENIC homozygous 58825294 2 53346516 53346517 G A 7 GENIC homozygous 58825296 2 53346518 53346519 C T 7 GENIC homozygous 58825297 2 53349106 53349107 C G 18 GENIC homozygous 58825299 2 53350206 53350207 T C 19 GENIC homozygous 59805857 2 53352166 53352167 C T 16 GENIC homozygous 59805858 2 53353009 53353010 T C 18 GENIC homozygous 58825302 2 53354391 53354392 G T 7 GENIC homozygous 59805859 2 53356151 53356152 A T 20 GENIC homozygous 58825309 2 53356862 53356863 T C 22 GENIC homozygous 58825310 2 53358547 53358548 T - 17 GENIC homozygous 58825311 2 53358587 53358599 CTTCCTTCCTTC ------------ 7 GENIC homozygous 59805860 2 53360130 53360131 T C 17 GENIC homozygous 59805862 2 53360389 53360390 A G 32 GENIC homozygous 58825313 2 53364129 53364130 T C 23 GENIC homozygous 58825317 2 53364642 53364643 A G 16 GENIC homozygous 59805863 2 53364675 53364689 ACACACACACACAC -------------- 11 GENIC homozygous 59805864 2 53365382 53365383 T A 13 GENIC homozygous 58825318 2 53366530 53366531 T C 7 GENIC homozygous 59805865 2 53369512 53369513 C T 12 GENIC homozygous 58825322 2 53371318 53371319 A C 18 GENIC homozygous 58825324 2 53372009 53372010 C T 17 GENIC homozygous 59805866 2 53372033 53372034 T A 20 GENIC homozygous 58825326 2 53375587 53375588 T C 21 GENIC homozygous 58825330 2 53376683 53376684 T C 24 GENIC homozygous 58825332 2 53380073 53380074 T A 11 GENIC homozygous 59805868 2 53381318 53381319 C G 14 GENIC homozygous 59805870 2 53381778 53381779 T A 19 GENIC homozygous 59805871 2 53382393 53382394 C - 12 GENIC homozygous 58825343 2 53383247 53383248 G T 13 GENIC homozygous 58825345 2 53383432 53383433 T C 19 INTERGENIC homozygous 59805872 2 53383856 53383857 A T 16 GENIC homozygous 59805873 2 53384632 53384633 A ATCTG 17 GENIC homozygous 58825346 2 53384881 53384882 T C 19 GENIC homozygous 58825347 2 53385614 53385615 T - 18 GENIC possibly homozygous 59805874 2 53387592 53387594 TT -- 11 GENIC homozygous 59805875 2 53387771 53387772 T TTTCC 10 GENIC homozygous 60480158 2 53388875 53388876 C T 15 GENIC homozygous 59805879 2 53389043 53389044 C G 13 GENIC homozygous 58825356 2 53389492 53389493 A C 26 GENIC homozygous 58825357 2 53389906 53389907 T C 24 GENIC homozygous 58825358 2 53390949 53390950 T C 12 GENIC homozygous 58825360 2 53391368 53391369 T A 15 GENIC homozygous 58825361 2 53391612 53391613 G A 19 GENIC homozygous 58825362 2 53392352 53392353 G A 18 GENIC homozygous 58825363 2 53392739 53392740 A ACTGT 17 GENIC homozygous 58825364 2 53393117 53393118 G C 16 GENIC homozygous 58825365 2 53396674 53396675 A T 16 GENIC homozygous 58825367 2 53397246 53397247 T C 13 GENIC homozygous 58825368 2 53397944 53397945 A G 18 GENIC homozygous 59805880 2 53398878 53398879 T TG 17 GENIC homozygous 58825369 2 53399573 53399574 T G 20 GENIC homozygous 59805881 2 53403615 53403616 G C 12 GENIC homozygous 58825380 2 53403872 53403873 G C 15 GENIC homozygous 59805884 2 53404493 53404494 G GT 10 GENIC homozygous 58825383 2 53404498 53404500 GG -- 10 GENIC homozygous 58825384 2 53404916 53404917 A G 10 GENIC homozygous 58825386 2 53405080 53405081 A G 20 GENIC possibly homozygous 59805885 2 53405358 53405359 A T 15 GENIC heterozygous 59805886 2 53407542 53407543 A T 13 GENIC homozygous 59805889 2 53405864 53405865 T TC 17 GENIC homozygous 59805887 2 53406219 53406220 C T 16 GENIC homozygous 59805888 2 53328517 53328518 T TCTCTCTC 8 GENIC homozygous 62450812 2 53405732 53405733 C A 23 GENIC heterozygous 62450813 2 53405763 53405764 G A 23 GENIC heterozygous 62450814 2 53405771 53405772 C A 26 GENIC heterozygous 62450815 2 53407604 53407605 T TG 14 GENIC homozygous 58825390 2 53407733 53407734 C T 7 GENIC homozygous 59695271 2 53408296 53408297 T C 8 GENIC homozygous 58825392 2 53409192 53409193 T A 16 GENIC homozygous 59805890 2 53409219 53409220 T C 16 GENIC homozygous 58825395 2 53409582 53409583 C T 14 GENIC homozygous 58825399 2 53409835 53409836 T C 17 GENIC homozygous 58825400 2 53409940 53409941 A G 22 GENIC homozygous 58825401 2 53410820 53410821 T C 22 GENIC homozygous 58825403 2 53411927 53411928 T A 17 GENIC homozygous 58825404 2 53412978 53412979 C T 17 GENIC homozygous 59805891 2 53413227 53413229 AC -- 10 GENIC homozygous 60443852 2 53413230 53413282 TACACCTGTGTTGTATATAATCCTGTTTTTGTGCCCTCTCATGAAGTATGTA ---------------------------------------------------- 19 GENIC homozygous 60443853