chr start stop reference nuc variant nuc depth genic status zygosity variant ID 2 53860291 53860297 CTGCCT ------ 8 GENIC homozygous 58826046 2 53861280 53861281 C T 21 GENIC possibly homozygous 58826047 2 53867376 53867377 T C 28 GENIC homozygous 58826049 2 53869552 53869556 CACG ---- 3 GENIC homozygous 58826051 2 53869566 53869584 CACACACACACACACACA ------------------ 9 GENIC heterozygous 61114044 2 53869568 53869584 CACACACACACACACA ---------------- 9 GENIC possibly homozygous 61114047 2 53871465 53871466 A AAT 9 GENIC homozygous 58826053 2 53872389 53872391 CC -- 13 GENIC possibly homozygous 58826054 2 53873866 53873867 T C 22 GENIC homozygous 58826055 2 53874484 53874485 G C 22 GENIC homozygous 58826056 2 53874510 53874511 T - 23 GENIC homozygous 58826057 2 53874519 53874520 A AG 22 GENIC homozygous 58826058 2 53874525 53874526 G T 22 GENIC homozygous 58826059 2 53874545 53874546 G - 22 GENIC homozygous 58826060 2 53874690 53874691 T G 31 GENIC homozygous 58826061 2 53874895 53874899 TACA ---- 22 GENIC homozygous 58826062 2 53875552 53875554 GG -- 28 GENIC homozygous 58826063 2 53875554 53875555 A C 28 GENIC homozygous 61048149 2 53875740 53875741 T C 35 GENIC homozygous 58826064 2 53878392 53878393 T C 29 GENIC homozygous 58826065 2 53878681 53878682 A C 21 GENIC homozygous 58826066 2 53879026 53879027 C T 26 GENIC homozygous 58826067 2 53879231 53879232 G A 19 GENIC homozygous 58826068 2 53879750 53879751 C T 26 GENIC homozygous 58826069 2 53879810 53879811 T G 18 GENIC homozygous 58826070 2 53879938 53879939 A G 33 GENIC homozygous 58826071 2 53880596 53880597 A C 18 GENIC homozygous 58826072 2 53880616 53880617 T C 19 GENIC homozygous 58826073 2 53880928 53880929 T A 29 GENIC homozygous 58826074 2 53881480 53881481 C A 26 GENIC homozygous 58826075 2 53881897 53881898 C A 30 GENIC homozygous 58826076 2 53883147 53883148 A G 27 GENIC homozygous 58826080 2 53883437 53883438 T G 11 GENIC homozygous 58826081 2 53884017 53884018 T C 30 GENIC homozygous 58826082 2 53884019 53884020 T G 30 GENIC homozygous 58826083 2 53884132 53884133 G C 35 GENIC homozygous 58826084 2 53884234 53884235 G A 32 GENIC homozygous 58826085 2 53884600 53884601 A G 34 GENIC homozygous 58826086 2 53885218 53885219 C T 23 GENIC homozygous 58826087 2 53885572 53885573 G A 14 GENIC homozygous 58826088 2 53885696 53885697 C T 19 GENIC homozygous 58826089 2 53886595 53886596 C T 26 GENIC homozygous 58826090 2 53886660 53886661 C T 28 GENIC homozygous 58826091 2 53886973 53886974 T C 23 GENIC homozygous 58826092 2 53887319 53887320 C G 25 GENIC homozygous 58826093 2 53887453 53887454 T A 21 GENIC homozygous 58826094 2 53887655 53887656 A G 25 GENIC homozygous 58826095 2 53887726 53887727 T G 26 GENIC homozygous 58826096 2 53887750 53887751 A - 25 GENIC homozygous 58826097 2 53887755 53887756 C T 26 GENIC homozygous 58826098 2 53887908 53887909 T C 14 GENIC homozygous 58826099 2 53888664 53888665 C CATAT 19 GENIC homozygous 58826100 2 53888802 53888803 A T 12 GENIC homozygous 58826101 2 53889617 53889618 T C 24 GENIC homozygous 58826102 2 53889949 53889951 TT -- 14 GENIC heterozygous 59695334 2 53889950 53889951 T - 14 GENIC possibly homozygous 58826103 2 53889991 53889992 G - 23 GENIC homozygous 58826104 2 53890101 53890102 G T 18 GENIC homozygous 58826105 2 53890187 53890188 C T 10 GENIC homozygous 58826106 2 53890376 53890377 G A 12 GENIC homozygous 58826107 2 53891619 53891620 G A 22 GENIC homozygous 58826108 2 53891781 53891782 T C 32 GENIC homozygous 58826109 2 53891949 53891950 G GT 23 GENIC homozygous 58826110 2 53891953 53891954 G T 26 GENIC homozygous 58826111 2 53892350 53892351 C T 17 GENIC homozygous 58826112 2 53893916 53893917 T C 26 GENIC homozygous 58826113 2 53894327 53894328 A C 17 GENIC homozygous 58826114 2 53894389 53894390 A G 27 GENIC homozygous 58826115 2 53894807 53894808 T A 24 GENIC homozygous 58826116 2 53895108 53895109 G A 19 GENIC homozygous 58826117 2 53895155 53895156 C T 23 GENIC homozygous 58826118 2 53895452 53895453 A - 36 GENIC homozygous 58826119 2 53896796 53896797 A G 15 GENIC homozygous 60443861 2 53896800 53896801 T A 15 GENIC homozygous 60443862 2 53896830 53896831 G T 16 GENIC homozygous 58826120 2 53897410 53897411 T A 27 GENIC homozygous 58826121 2 53897508 53897509 C G 31 GENIC homozygous 58826122 2 53897906 53897907 A G 32 GENIC homozygous 58826123 2 53898488 53898489 A C 29 GENIC homozygous 58826124 2 53898582 53898583 G A 25 GENIC homozygous 58826125 2 53898668 53898672 CCTT ---- 7 GENIC homozygous 58826126 2 53899552 53899553 G A 15 GENIC homozygous 58826127 2 53899896 53899897 T C 24 GENIC homozygous 58826128 2 53900005 53900006 A G 31 GENIC homozygous 58826129 2 53900685 53900688 TTT --- 17 GENIC heterozygous 59806385 2 53900686 53900688 TT -- 17 GENIC possibly homozygous 58826130 2 53901428 53901429 T TGAA 32 GENIC homozygous 58826131 2 53901635 53901636 C T 25 GENIC homozygous 58826132 2 53902343 53902344 T A 20 GENIC homozygous 58826133 2 53902381 53902382 C T 22 GENIC homozygous 58826134 2 53902582 53902585 GTT --- 15 GENIC homozygous 58826135 2 53902902 53902903 T G 27 GENIC homozygous 58826136 2 53903235 53903236 A - 24 GENIC homozygous 58826137 2 53903276 53903277 G GA 25 GENIC homozygous 58826138 2 53904351 53904352 G T 21 GENIC homozygous 58826139 2 53904838 53904839 T C 18 GENIC homozygous 58826140 2 53905375 53905376 T C 18 GENIC homozygous 58826141 2 53905493 53905495 TG -- 19 GENIC homozygous 58826142 2 53906330 53906331 G T 21 GENIC homozygous 58826146 2 53905572 53905573 T G 28 GENIC homozygous 58826143 2 53905655 53905656 C A 20 GENIC homozygous 58826144 2 53905720 53905721 C CCTT 16 GENIC homozygous 58826145 2 53906590 53906593 TTC --- 16 GENIC homozygous 58826147 2 53906701 53906702 T G 10 GENIC homozygous 58826148 2 53906776 53906777 C T 13 GENIC homozygous 58826149 2 53906823 53906837 AGAGAGAGAGAGAG -------------- 3 GENIC heterozygous 61114049 2 53907115 53907116 A T 25 GENIC homozygous 58826151 2 53907221 53907222 G A 24 GENIC homozygous 58826152 2 53907249 53907250 C T 26 GENIC homozygous 58826153 2 53907554 53907555 A T 30 GENIC homozygous 58826154 2 53907564 53907565 A G 31 GENIC homozygous 58826155 2 53908293 53908294 G A 19 GENIC homozygous 58826159 2 53908358 53908373 AAAAAAAAAAAAAAG --------------- 14 GENIC heterozygous 58826160 2 53909184 53909185 C - 31 GENIC homozygous 58826162 2 53909300 53909301 G A 25 GENIC homozygous 58826163 2 53909491 53909492 G C 24 GENIC homozygous 58826165 2 53910096 53910097 T C 22 GENIC homozygous 58826167 2 53910116 53910117 G A 26 GENIC homozygous 58826168 2 53910240 53910241 C - 29 GENIC homozygous 58826171 2 53910252 53910256 AAAC ---- 26 GENIC homozygous 58826172 2 53910274 53910275 A C 23 GENIC homozygous 58826174 2 53910354 53910355 G T 30 GENIC homozygous 58826175 2 53911223 53911224 A AAAAC 16 GENIC homozygous 58826177 2 53911264 53911265 G A 22 GENIC homozygous 60443863 2 53911288 53911289 A AC 11 GENIC homozygous 61114051 2 53911292 53911293 A AAAAAC 21 GENIC homozygous 58826180 2 53911866 53911867 A G 17 GENIC homozygous 58826181 2 53911944 53911945 G A 17 GENIC homozygous 58826182 2 53912681 53912682 C - 19 GENIC homozygous 58826192 2 53912862 53912863 C T 21 GENIC homozygous 58826194 2 53912955 53912956 A G 21 GENIC homozygous 58826195 2 53913056 53913057 A T 7 GENIC homozygous 58826196 2 53913441 53913442 G A 19 GENIC homozygous 58826197 2 53913467 53913468 G A 20 GENIC homozygous 58826198 2 53913812 53913813 G C 20 GENIC homozygous 58826199 2 53914142 53914143 A ATATC 2 GENIC heterozygous 60480250 2 53914482 53914483 T C 20 GENIC homozygous 58826200 2 53915487 53915488 C G 32 GENIC homozygous 58826201 2 53915627 53915628 C T 28 GENIC homozygous 58826202 2 53915995 53915996 T C 40 GENIC homozygous 58826203 2 53916985 53916986 A G 14 GENIC homozygous 58826204 2 53917445 53917446 T C 24 GENIC homozygous 58826205 2 53917685 53917686 G C 24 GENIC homozygous 58826206 2 53917930 53917931 C A 28 GENIC homozygous 58826207 2 53918051 53918052 G A 18 GENIC homozygous 58826208 2 53919044 53919045 C A 27 GENIC homozygous 58826209 2 53920723 53920726 AAA --- 20 GENIC homozygous 58826210 2 53921443 53921444 A T 28 GENIC homozygous 58826212 2 53922739 53922740 C A 24 GENIC homozygous 58826213 2 53923006 53923007 C A 30 GENIC homozygous 58826214 2 53923455 53923456 G GACAGAC 25 GENIC homozygous 58826215 2 53923785 53923786 T C 19 GENIC homozygous 58826216 2 53924259 53924260 G A 21 GENIC homozygous 58826217 2 53924381 53924382 G A 25 GENIC homozygous 58826218 2 53924923 53924924 T C 20 GENIC homozygous 58826219 2 53925785 53925786 T - 9 GENIC homozygous 59695350 2 53928914 53928915 C CTTTT 2 GENIC heterozygous 60480252 2 53928914 53928915 C CTT 2 GENIC heterozygous 61048151 2 53928931 53928932 T TTA 10 GENIC possibly homozygous 58826222 2 53931181 53931182 C A 14 GENIC homozygous 58826223 2 53931319 53931320 A AC 5 GENIC homozygous 58826224 2 53931603 53931604 C T 19 GENIC homozygous 58826225 2 53931611 53931612 C A 20 GENIC homozygous 58826226 2 53932215 53932216 G A 22 GENIC homozygous 58826227 2 53932297 53932298 T C 17 GENIC homozygous 58826228 2 53932309 53932310 C CA 16 GENIC homozygous 58826229 2 53932464 53932465 C T 23 GENIC homozygous 58826230 2 53934961 53934962 C T 24 GENIC possibly homozygous 58826231 2 53935725 53935726 G GT 21 GENIC homozygous 58826232 2 53936958 53936959 A - 18 GENIC homozygous 58826233 2 53938739 53938740 C T 17 GENIC homozygous 58826234 2 53939486 53939487 A - 29 GENIC homozygous 58826235 2 53940625 53940627 AA -- 8 GENIC homozygous 58826236 2 53942756 53942757 A AT 13 GENIC homozygous 58826237 2 53944216 53944217 A G 17 GENIC homozygous 58826238 2 53945417 53945418 T TACACACAC 5 GENIC heterozygous 60566835 2 53945417 53945418 T TACAC 5 GENIC heterozygous 60750545 2 53944405 53944406 T C 22 GENIC homozygous 58826239 2 53944863 53944864 C T 19 GENIC homozygous 58826240 2 53945874 53945886 CACACACACACA ------------ 3 GENIC heterozygous 61380552 2 53946161 53946162 T - 12 GENIC homozygous 58826242 2 53948661 53948663 AA -- 12 GENIC heterozygous 59695354 2 53948662 53948663 A - 12 GENIC heterozygous 59695356 2 53949936 53949937 A T 28 GENIC homozygous 58826243 2 53949983 53949984 G A 13 GENIC homozygous 58826244 2 53950068 53950072 AGAC ---- 16 GENIC possibly homozygous 58826245 2 53950123 53950124 A G 19 GENIC homozygous 58826247 2 53950142 53950143 A - 11 GENIC homozygous 61114056 2 53950144 53950147 AGA --- 9 GENIC homozygous 61114058 2 53950151 53950159 AAGAAAGG -------- 6 GENIC homozygous 61114060 2 53950284 53950285 T C 30 GENIC homozygous 58826252 2 53950646 53950687 TGAGGAGTGCTCTGAAATCCTGTCTACTAGATAAGATGGGT ----------------------------------------- 13 GENIC homozygous 60480254 2 53951100 53951103 AAG --- 18 GENIC homozygous 58826255 2 53951541 53951542 C CT 11 GENIC heterozygous 58826256 2 53952167 53952168 T C 22 GENIC homozygous 58826257 2 53952582 53952583 C CA 2 GENIC homozygous 60480255 2 53952589 53952590 C A 30 GENIC homozygous 58826260 2 53952893 53952894 T C 24 GENIC homozygous 58826261 2 53952898 53952899 G C 23 GENIC homozygous 58826262 2 53953080 53953081 A G 31 GENIC homozygous 58826263 2 53953353 53953354 C T 27 GENIC homozygous 59806415 2 53953693 53953694 G A 17 GENIC homozygous 58826264 2 53953700 53953701 T C 19 GENIC homozygous 58826265 2 53953758 53953759 T G 22 GENIC homozygous 58826266 2 53953762 53953763 T G 22 GENIC homozygous 58826267 2 53953766 53953767 T G 23 GENIC homozygous 59695358 2 53953770 53953782 TTTATTTATTTT ------------ 25 GENIC homozygous 58826268 2 53954595 53954596 T G 26 GENIC homozygous 58826269 2 53954597 53954598 T C 26 GENIC homozygous 58826270 2 53954800 53954801 G A 33 GENIC homozygous 58826272 2 53954806 53954807 G A 35 GENIC homozygous 58826273 2 53955031 53955032 T G 24 GENIC homozygous 58826274 2 53955042 53955043 T A 24 GENIC homozygous 58826275 2 53955441 53955442 T C 29 GENIC homozygous 58826276 2 53955752 53955753 C T 34 GENIC homozygous 58826277 2 53956234 53956235 A G 20 GENIC homozygous 59806416 2 53956258 53956259 G T 28 GENIC homozygous 59806417 2 53956722 53956723 T C 26 GENIC homozygous 58826279 2 53957192 53957193 G A 26 GENIC homozygous 58826280 2 53957203 53957204 A G 27 GENIC homozygous 58826281 2 53957429 53957430 T - 20 GENIC homozygous 58826282 2 53957680 53957681 C T 22 GENIC homozygous 59806418 2 53957732 53957733 A T 16 GENIC homozygous 58826284 2 53958356 53958357 G T 21 GENIC homozygous 58826288 2 53958251 53958252 A G 21 GENIC homozygous 58826285 2 53958282 53958283 T A 24 GENIC homozygous 58826286 2 53958291 53958292 A G 21 GENIC homozygous 58826287 2 53958359 53958360 C T 22 GENIC homozygous 58826289 2 53958515 53958516 C T 21 GENIC homozygous 58826290 2 53958639 53958640 C - 31 GENIC homozygous 58826291 2 53958646 53958647 C T 30 GENIC homozygous 58826292 2 53958677 53958678 G C 31 GENIC homozygous 58826293 2 53959003 53959004 C T 21 GENIC homozygous 58826294 2 53959008 53959009 T C 21 GENIC homozygous 58826295 2 53959222 53959223 T G 17 GENIC homozygous 58826296 2 53959540 53959541 C T 7 GENIC homozygous 58826297 2 53960167 53960168 T A 26 GENIC homozygous 58826299 2 53961142 53961143 C CT 15 GENIC possibly homozygous 58826301 2 53961316 53961317 T C 21 GENIC homozygous 58826303 2 53961492 53961493 A G 19 GENIC homozygous 58826304 2 53961527 53961528 T A 14 GENIC homozygous 59806420 2 53962096 53962097 T - 26 GENIC homozygous 59806421 2 53962556 53962557 A ATTTTT 6 GENIC homozygous 60480256 2 53962610 53962611 G A 20 GENIC homozygous 59806422 2 53962686 53962687 G A 14 GENIC homozygous 58826306 2 53962955 53962956 T A 27 GENIC homozygous 58826308 2 53963115 53963134 ATCTACGACTTTGTTTGCA ------------------- 22 GENIC homozygous 59806423 2 53963208 53963209 T C 23 GENIC homozygous 58826309 2 53964203 53964206 ATT --- 22 GENIC homozygous 59806425 2 53963295 53963296 A T 28 GENIC homozygous 59806424 2 53963952 53963953 A C 16 GENIC homozygous 58826310 2 53964077 53964078 T G 24 GENIC homozygous 58826311 2 53964242 53964243 C T 18 GENIC homozygous 58826312 2 53964862 53964866 GCAT ---- 17 GENIC homozygous 58826313 2 53965227 53965228 T G 16 GENIC homozygous 58826314 2 53965434 53965435 A T 25 GENIC homozygous 58826315 2 53965499 53965500 A G 24 GENIC homozygous 58826316 2 53965678 53965679 C T 16 GENIC homozygous 59806426 2 53966694 53966695 T A 18 GENIC homozygous 58826318 2 53967085 53967086 C T 20 GENIC homozygous 58826319 2 53967701 53967702 T C 19 GENIC homozygous 58826320 2 53968322 53968323 G A 18 GENIC homozygous 58826321 2 53968645 53968646 C T 17 GENIC homozygous 58826322 2 53969424 53969425 A T 31 GENIC homozygous 58826323 2 53969970 53969971 T C 14 GENIC homozygous 58826324 2 53970033 53970039 CACACG ------ 4 GENIC heterozygous 58826325 2 53970066 53970067 C A 31 GENIC homozygous 58826328 2 53970104 53970105 C T 34 GENIC homozygous 58826329 2 53970135 53970136 C T 27 GENIC homozygous 58826330 2 53970438 53970439 T C 25 GENIC homozygous 58826331 2 53971778 53971779 C T 31 GENIC homozygous 58826332 2 53972441 53972442 T TATACACACACACACAC 2 GENIC heterozygous 60971065 2 53972482 53972483 A ATAT 6 GENIC heterozygous 60971067 2 53973380 53973400 GTGTGTGTATGTGTGTGTGT -------------------- 10 GENIC heterozygous 60480257 2 53973382 53973400 GTGTGTATGTGTGTGTGT ------------------ 10 GENIC heterozygous 60480258 2 53973568 53973569 T A 23 GENIC homozygous 58826338 2 53973735 53973736 A - 23 GENIC possibly homozygous 60443864 2 53977468 53977470 AA -- 13 GENIC heterozygous 60539622 2 53977469 53977470 A - 13 GENIC heterozygous 60480259 2 53977937 53977938 G GA 19 GENIC heterozygous 58826346 2 53977938 53977939 A - 19 GENIC possibly homozygous 59806427 2 53979064 53979065 T C 30 GENIC homozygous 58826348 2 53979851 53979852 G A 32 GENIC homozygous 59806428 2 53981227 53981228 C T 18 GENIC homozygous 59806429 2 53982525 53982526 G A 20 GENIC homozygous 59806430 2 53983417 53983418 T TAA 18 GENIC homozygous 60480260 2 53983430 53983431 C A 23 GENIC homozygous 59806432 2 53983838 53983839 T C 28 GENIC homozygous 58826357 2 53984874 53984875 T C 26 GENIC homozygous 59806433 2 53985392 53985393 G A 24 GENIC homozygous 59806434 2 53985747 53985748 G A 22 GENIC homozygous 58826360 2 53986982 53986983 G A 27 GENIC homozygous 59806435 2 53987441 53987442 T C 33 GENIC homozygous 58826362 2 53987589 53987590 T C 22 GENIC homozygous 58826363 2 53988108 53988109 A G 21 GENIC homozygous 58826365 2 53988255 53988256 T C 22 GENIC possibly homozygous 58826366 2 53989748 53989749 A T 9 GENIC homozygous 58826367 2 53989758 53989759 C T 12 GENIC homozygous 58826368 2 53990060 53990061 T - 4 GENIC heterozygous 59806438 2 53990063 53990064 T A 12 GENIC homozygous 60480261 2 53993067 53993069 TT -- 10 GENIC heterozygous 58826385 2 53993068 53993069 T - 10 GENIC heterozygous 58826386 2 53997877 53997878 A AATATTATATTATATT 3 GENIC homozygous 61187010 2 53998578 53998590 TGTGTGTATGTG ------------ 9 GENIC heterozygous 60480262 2 53998580 53998590 TGTGTATGTG ---------- 9 GENIC heterozygous 60480263 2 54003489 54003490 A C 25 GENIC homozygous 58826399 2 54004144 54004145 G - 18 GENIC homozygous 58826401 2 54004146 54004148 TT -- 16 GENIC homozygous 58826402 2 54004155 54004156 C - 16 GENIC homozygous 58826403 2 54004157 54004158 C - 17 GENIC homozygous 58826404 2 54006132 54006133 T C 21 GENIC homozygous 59806439