chr start stop reference nuc variant nuc depth genic status zygosity variant ID 19 52347659 52347660 G C 24 INTERGENIC homozygous 46158832 19 52347738 52347739 T TTC 19 INTERGENIC homozygous 46158833 19 52347746 52347747 C T 20 INTERGENIC homozygous 46158834 19 52348111 52348112 T TCTGCCTCTC 2 INTERGENIC homozygous 46409050 19 52348191 52348192 T G 14 INTERGENIC homozygous 46158838 19 52348279 52348280 G A 11 INTERGENIC homozygous 46158839 19 52348725 52348729 GTGA ---- 17 INTERGENIC homozygous 46158840 19 52348783 52348784 C A 17 INTERGENIC homozygous 46158841 19 52348886 52348887 C T 24 INTERGENIC homozygous 46158842 19 52350169 52350170 A G 16 INTERGENIC homozygous 46158843 19 52350375 52350376 A G 26 INTERGENIC homozygous 46158844 19 52351716 52351717 G - 6 INTERGENIC homozygous 46261375 19 52351945 52351946 T TAG 23 INTERGENIC homozygous 46158845 19 52352086 52352087 C G 15 INTERGENIC homozygous 46158846 19 52352720 52352724 GATG ---- 7 INTERGENIC homozygous 46158848 19 52353559 52353560 G GGA 1 GENIC homozygous 46158849 19 52354092 52354093 A G 9 GENIC homozygous 46158852 19 52354865 52354866 A G 32 GENIC homozygous 46158853 19 52354972 52354973 C T 15 GENIC homozygous 46158854 19 52354990 52354991 C A 12 GENIC homozygous 46158855 19 52355237 52355238 A G 18 GENIC homozygous 46158856 19 52355320 52355321 C CA 12 GENIC possibly homozygous 46158858 19 52355860 52355861 G - 12 GENIC homozygous 46158859 19 52356317 52356318 G C 19 GENIC homozygous 46158860 19 52356326 52356327 C T 20 GENIC homozygous 46158861 19 52356361 52356362 G A 18 GENIC homozygous 46158862 19 52356584 52356585 T G 9 GENIC homozygous 46158863 19 52356599 52356600 C T 10 GENIC homozygous 46158864 19 52356667 52356668 T G 16 GENIC homozygous 46158865 19 52356681 52356682 C CT 14 GENIC homozygous 46158866 19 52357055 52357056 G C 19 GENIC homozygous 46158867 19 52357194 52357195 G A 10 GENIC homozygous 46158868 19 52357202 52357203 T C 11 GENIC homozygous 46158869 19 52357224 52357225 T C 13 GENIC homozygous 46158870 19 52357271 52357272 T C 11 GENIC homozygous 46158871 19 52357274 52357275 G GAAGA 11 GENIC homozygous 46158872 19 52357335 52357336 T G 15 GENIC homozygous 46158873 19 52357336 52357337 C T 15 GENIC homozygous 46158874 19 52357525 52357526 C T 23 GENIC homozygous 46158875 19 52357543 52357544 C T 22 GENIC homozygous 46158876 19 52357766 52357767 G A 19 GENIC homozygous 46158877 19 52357871 52357872 C A 18 GENIC possibly homozygous 46158878 19 52357886 52357887 G A 18 GENIC homozygous 46158879 19 52359662 52359663 T C 25 GENIC homozygous 46158880 19 52359944 52359945 G GACAC 2 GENIC homozygous 46158881 19 52361534 52361535 C CACAT 13 GENIC homozygous 46158882 19 52362980 52362981 G GA 25 INTERGENIC homozygous 46158884 19 52363043 52363044 G A 26 INTERGENIC homozygous 46158885 19 52364043 52364044 T C 6 INTERGENIC homozygous 46158886 19 52364400 52364404 GTGT ---- 4 INTERGENIC heterozygous 46409058 19 52364471 52364472 T C 11 INTERGENIC homozygous 46158887 19 52365936 52365940 GTGT ---- 5 INTERGENIC homozygous 46158889 19 52367174 52367175 C CATCT 27 INTERGENIC possibly homozygous 46158890 19 52367324 52367325 T G 23 INTERGENIC homozygous 46158891 19 52367327 52367328 T G 23 INTERGENIC homozygous 46158892 19 52371585 52371586 A ACG 17 GENIC possibly homozygous 46158893 19 52371634 52371635 A AACACAC 9 GENIC heterozygous 46158894 19 52371634 52371635 A AACACACAC 9 GENIC heterozygous 46158895 19 52371634 52371635 A AAC 9 GENIC heterozygous 46213602 19 52372293 52372294 A ATTTG 17 GENIC homozygous 46158897 19 52372297 52372298 A G 27 GENIC homozygous 46158898 19 52376378 52376379 A C 16 GENIC homozygous 46463529 19 52373418 52373419 G A 29 GENIC homozygous 46158899 19 52373695 52373696 A C 16 GENIC homozygous 46158900 19 52375963 52375964 G GT 27 GENIC homozygous 46158901 19 52376082 52376083 A G 30 GENIC homozygous 46158902 19 52376191 52376192 G A 30 GENIC homozygous 46158903 19 52353571 52353572 G GGAGAGCGAGAGCGAGAGC 2 GENIC homozygous 46463519 19 52357062 52357175 AAAATTTCGATTTAGGGGGGCTGGGGATTTAGCTCAGTGGTAGAGCGCTTACCTAGGAAGCGCAAGGCCCTGGGTTCGGTCCCCAGCTCCGAAAAAAAAAAGAACCAAAAAAA ----------------------------------------------------------------------------------------------------------------- 25 GENIC homozygous 46463523 19 52361435 52361447 CATACATACATG ------------ 17 GENIC homozygous 46463525 19 52376377 52376378 A - 16 GENIC homozygous 46463527 19 52356933 52356937 CACA ---- 2 GENIC homozygous 46566618 19 52364398 52364404 GTGTGT ------ 4 INTERGENIC heterozygous 46446199 19 52376451 52376452 C G 15 GENIC homozygous 46158906 19 52378074 52378075 T TG 15 GENIC homozygous 46158907 19 52378268 52378269 T C 9 GENIC homozygous 46158908 19 52378418 52378419 T C 18 GENIC homozygous 46158909 19 52378452 52378454 GC -- 16 GENIC homozygous 46158910 19 52379395 52379396 G A 13 GENIC homozygous 46158911 19 52379445 52379446 G A 13 GENIC homozygous 46158912 19 52380032 52380033 C G 18 GENIC homozygous 46158913 19 52380722 52380726 AGGG ---- 15 GENIC homozygous 46158914 19 52380737 52380738 C T 16 GENIC homozygous 46158916 19 52380758 52380759 G A 17 GENIC homozygous 46158917 19 52381018 52381019 A G 23 GENIC possibly homozygous 46158918 19 52382393 52382394 A AGCAACCT 30 GENIC homozygous 46158919 19 52382851 52382852 T C 23 GENIC homozygous 46158920 19 52383352 52383353 A G 16 GENIC homozygous 46158921 19 52384400 52384401 T C 33 GENIC homozygous 46158922 19 52385608 52385609 A G 39 GENIC homozygous 46158923 19 52386190 52386191 T C 33 GENIC homozygous 46158924 19 52386337 52386338 C CACTG 32 GENIC homozygous 46158925 19 52386432 52386433 A AGT 23 GENIC heterozygous 46158926 19 52386432 52386433 A AGTGT 23 GENIC possibly homozygous 46566620 19 52386771 52386772 T C 31 GENIC homozygous 46158927 19 52386846 52386847 G A 18 GENIC homozygous 46158928 19 52387078 52387079 T TA 34 GENIC homozygous 46158929 19 52388780 52388781 C T 24 GENIC homozygous 46158930 19 52389365 52389366 T TA 18 GENIC possibly homozygous 46158931 19 52389885 52389886 C T 13 GENIC homozygous 46158933 19 52389890 52389891 T A 14 GENIC homozygous 46158934 19 52390199 52390200 G A 16 GENIC homozygous 46158935 19 52391035 52391036 G GA 17 GENIC possibly homozygous 46158936 19 52391088 52391089 T C 29 GENIC homozygous 46158937 19 52391235 52391236 T C 31 GENIC homozygous 46158938 19 52391742 52391743 A G 34 GENIC homozygous 46158939 19 52391845 52391846 T C 21 GENIC homozygous 46158940 19 52392364 52392365 G C 17 GENIC homozygous 46158944 19 52392053 52392054 G A 38 GENIC homozygous 46158941 19 52392116 52392117 A G 37 GENIC homozygous 46158942 19 52392238 52392239 A G 25 GENIC homozygous 46158943 19 52392530 52392531 A ACAC 32 GENIC homozygous 46158945 19 52392532 52392533 T TTC 33 GENIC homozygous 46158946 19 52392545 52392546 T C 30 GENIC homozygous 46158947 19 52392561 52392562 G A 28 GENIC homozygous 46158948 19 52392635 52392636 C T 36 GENIC homozygous 46158949 19 52392642 52392643 T C 39 GENIC homozygous 46158950 19 52392646 52392647 C T 37 GENIC homozygous 46158951 19 52392669 52392670 T C 38 GENIC homozygous 46158952 19 52392696 52392697 A T 35 GENIC homozygous 46158953 19 52392745 52392746 T C 21 GENIC homozygous 46158954 19 52392794 52392795 G A 19 GENIC homozygous 46158955 19 52392797 52392798 T G 27 GENIC homozygous 46158956 19 52392812 52392813 T TG 28 GENIC homozygous 46158957 19 52392834 52392835 G GCTCAGTCATGTGACTAGAAAGAAA 27 GENIC homozygous 46158958 19 52392872 52392873 A C 23 GENIC possibly homozygous 46158959 19 52392993 52392994 A G 32 GENIC homozygous 46158960 19 52392996 52392997 G C 36 GENIC homozygous 46158961 19 52393060 52393061 T C 19 GENIC homozygous 46158962 19 52393253 52393254 T C 22 GENIC homozygous 46158963 19 52393314 52393315 T A 26 GENIC homozygous 46158964 19 52393341 52393342 G A 27 GENIC homozygous 46158965 19 52393372 52393373 C T 25 GENIC homozygous 46158966 19 52393426 52393427 C G 25 GENIC homozygous 46158967 19 52394090 52394091 T C 31 GENIC homozygous 46158968 19 52394228 52394229 C T 16 GENIC homozygous 46158969 19 52394266 52394267 A C 18 GENIC homozygous 46158970 19 52394288 52394289 T C 12 GENIC homozygous 46158971 19 52394331 52394332 G A 18 GENIC homozygous 46158972 19 52394450 52394451 C G 20 GENIC homozygous 46158973 19 52394454 52394455 G A 18 GENIC homozygous 46158974 19 52394683 52394684 C T 24 GENIC homozygous 46158975 19 52394992 52394993 A G 18 GENIC homozygous 46158976 19 52395106 52395107 G C 23 GENIC homozygous 46158977 19 52395368 52395369 C T 17 GENIC homozygous 46158978 19 52395497 52395498 T C 19 GENIC homozygous 46158979 19 52398197 52398198 T TGACGACGAC 9 INTERGENIC homozygous 46463531 19 52398270 52398271 C CA 10 INTERGENIC homozygous 46158990 19 52398272 52398273 C CA 10 INTERGENIC homozygous 46158991 19 52398473 52398474 T TA 25 INTERGENIC homozygous 46158992 19 52398646 52398647 T A 33 INTERGENIC homozygous 46158993 19 52398657 52398658 C G 35 INTERGENIC homozygous 46158994 19 52398698 52398699 C T 27 INTERGENIC homozygous 46158995 19 52398749 52398750 G A 26 INTERGENIC homozygous 46158996 19 52398868 52398869 C T 37 INTERGENIC homozygous 46158997 19 52399095 52399096 C T 31 INTERGENIC homozygous 46158998 19 52399183 52399184 C T 21 INTERGENIC homozygous 46158999 19 52399927 52399928 T C 25 INTERGENIC homozygous 46159000 19 52399928 52399929 G A 25 INTERGENIC homozygous 46159001 19 52400103 52400104 A AGG 31 INTERGENIC homozygous 46159002 19 52400273 52400274 C G 22 INTERGENIC homozygous 46159003