chr start stop reference nuc variant nuc depth genic status zygosity variant ID 19 54694509 54694510 A ATAG 11 GENIC heterozygous 46165267 19 54694509 54694510 A AT 11 GENIC heterozygous 46410390 19 54694515 54694517 CC -- 11 GENIC possibly homozygous 46165268 19 54694543 54694545 GT -- 16 GENIC homozygous 46165269 19 54694558 54694559 A G 17 GENIC homozygous 46165270 19 54694589 54694590 G C 18 GENIC homozygous 46165271 19 54694913 54694914 A G 16 INTERGENIC homozygous 46165272 19 54695002 54695003 A T 3 INTERGENIC homozygous 46165274 19 54695023 54695024 T A 8 INTERGENIC homozygous 46165276 19 54695025 54695026 T C 9 INTERGENIC homozygous 46165277 19 54695057 54695059 AA -- 16 INTERGENIC homozygous 46165278 19 54695226 54695227 A - 16 INTERGENIC homozygous 46165280 19 54695588 54695589 T C 32 INTERGENIC homozygous 46165281 19 54695607 54695608 T C 27 INTERGENIC homozygous 46165282 19 54695615 54695616 T C 31 INTERGENIC homozygous 46165283 19 54695651 54695652 A C 32 INTERGENIC homozygous 46165284 19 54696109 54696110 C G 14 INTERGENIC homozygous 46165285 19 54698460 54698461 G T 18 INTERGENIC homozygous 46165291 19 54698558 54698559 G A 21 INTERGENIC homozygous 46165292 19 54698695 54698696 G A 28 INTERGENIC homozygous 46165293 19 54698715 54698716 A C 35 INTERGENIC homozygous 46165294 19 54698766 54698767 A G 25 INTERGENIC homozygous 46165295 19 54698906 54698907 T C 27 INTERGENIC homozygous 46165296 19 54698965 54698966 G A 21 INTERGENIC homozygous 46165297 19 54699205 54699206 G - 9 INTERGENIC heterozygous 46553370 19 54699381 54699382 A G 23 INTERGENIC homozygous 46165299 19 54699422 54699423 C G 30 INTERGENIC homozygous 46165300 19 54699873 54699874 T A 26 INTERGENIC homozygous 46165301 19 54700250 54700251 G A 25 INTERGENIC homozygous 46165302 19 54700895 54700896 C T 14 INTERGENIC homozygous 46165303 19 54700901 54700902 A G 13 INTERGENIC homozygous 46165304 19 54700934 54700935 G T 14 INTERGENIC homozygous 46165305 19 54701000 54701001 G A 10 INTERGENIC homozygous 46165307 19 54701002 54701003 G A 10 INTERGENIC homozygous 46165308 19 54701249 54701250 G A 4 INTERGENIC homozygous 46213851 19 54701252 54701253 T TACATATAC 4 INTERGENIC homozygous 46410394 19 54701375 54701379 TTTA ---- 12 INTERGENIC homozygous 46165310 19 54701396 54701397 C CT 16 INTERGENIC homozygous 46165311 19 54701556 54701557 C T 4 INTERGENIC homozygous 46165313 19 54701878 54701879 T A 28 INTERGENIC homozygous 46165314 19 54701969 54701970 G A 24 INTERGENIC homozygous 46165315 19 54701970 54701971 G C 23 INTERGENIC homozygous 46165316 19 54701972 54701973 T C 21 INTERGENIC homozygous 46165317 19 54701983 54701984 A G 19 INTERGENIC homozygous 46165318 19 54701999 54702000 A G 21 INTERGENIC homozygous 46165319 19 54702537 54702538 T A 19 INTERGENIC homozygous 46165320 19 54702539 54702540 T G 21 INTERGENIC homozygous 46165321 19 54702578 54702579 G A 31 INTERGENIC homozygous 46165322 19 54702588 54702589 T C 33 INTERGENIC homozygous 46165323 19 54702946 54702947 C G 20 INTERGENIC homozygous 46165324 19 54703062 54703063 C CA 18 INTERGENIC homozygous 46165325 19 54703068 54703069 C T 20 INTERGENIC homozygous 46165326 19 54703305 54703306 C G 24 INTERGENIC homozygous 46165327 19 54703339 54703340 G GA 23 INTERGENIC homozygous 46165329 19 54703352 54703355 AAA --- 23 INTERGENIC homozygous 46165330 19 54703382 54703383 A G 25 INTERGENIC homozygous 46165331 19 54703393 54703394 A C 24 INTERGENIC homozygous 46165332 19 54704215 54704216 G T 30 INTERGENIC homozygous 46165333 19 54704290 54704291 C T 31 INTERGENIC homozygous 46165334 19 54704305 54704306 A T 33 INTERGENIC homozygous 46165335 19 54704359 54704360 T C 25 INTERGENIC homozygous 46165336 19 54704415 54704416 T A 25 INTERGENIC homozygous 46165337 19 54704461 54704462 A C 21 INTERGENIC homozygous 46165338 19 54704547 54704548 T G 29 INTERGENIC possibly homozygous 46165339 19 54704579 54704583 TTTT ---- 29 INTERGENIC homozygous 46165341 19 54704658 54704659 A AT 21 INTERGENIC homozygous 46165342 19 54704680 54704681 A C 21 INTERGENIC homozygous 46165343 19 54704825 54704826 T A 30 INTERGENIC homozygous 46165344 19 54705043 54705044 C T 30 INTERGENIC homozygous 46165345 19 54705489 54705490 C A 36 INTERGENIC homozygous 46165346 19 54705554 54705555 C T 39 INTERGENIC homozygous 46165347 19 54705699 54705700 T - 18 INTERGENIC homozygous 46165348 19 54705705 54705706 T G 19 INTERGENIC homozygous 46464116 19 54705767 54705769 AA -- 15 INTERGENIC homozygous 46165349 19 54705940 54705941 A AG 39 INTERGENIC homozygous 46410396 19 54705941 54705942 A C 39 INTERGENIC homozygous 46410398 19 54705943 54705944 T TGGGCACGCAGAGGCACCCCTTTCCCCACACC 39 INTERGENIC homozygous 46410400 19 54705945 54705946 G GACTA 39 INTERGENIC homozygous 46410402 19 54706090 54706091 C A 26 INTERGENIC homozygous 46165351 19 54706440 54706441 C T 29 INTERGENIC homozygous 46165352 19 54706772 54706773 C G 21 INTERGENIC homozygous 46165353 19 54706821 54706822 G T 23 INTERGENIC homozygous 46165354 19 54706904 54706905 T A 8 INTERGENIC homozygous 46165355 19 54706915 54706916 C CT 7 INTERGENIC homozygous 46165356 19 54706998 54706999 G GTGT 11 INTERGENIC homozygous 46165358 19 54707052 54707053 T G 16 INTERGENIC homozygous 46165360 19 54707340 54707341 C T 24 INTERGENIC homozygous 46165361 19 54707481 54707482 T A 40 INTERGENIC homozygous 46165362 19 54707530 54707531 A G 36 INTERGENIC homozygous 46165363 19 54707599 54707600 G C 34 INTERGENIC homozygous 46165364 19 54707686 54707687 C G 17 INTERGENIC homozygous 46165365 19 54707810 54707811 G A 26 INTERGENIC homozygous 46165366 19 54707811 54707812 T C 25 INTERGENIC homozygous 46165367 19 54707822 54707823 G A 30 INTERGENIC homozygous 46165368 19 54708083 54708084 C G 13 INTERGENIC homozygous 46165369 19 54708109 54708110 T TTCTCTC 2 INTERGENIC homozygous 46410406 19 54708155 54708157 GC -- 14 INTERGENIC heterozygous 46410413 19 54708184 54708185 G C 18 INTERGENIC homozygous 46165370 19 54708196 54708197 G T 21 INTERGENIC homozygous 46165371 19 54708337 54708338 C T 27 INTERGENIC homozygous 46165372 19 54708624 54708625 T G 19 INTERGENIC homozygous 46165373 19 54708705 54708706 G T 24 INTERGENIC homozygous 46165374 19 54708866 54708867 G C 20 INTERGENIC homozygous 46165375 19 54708886 54708887 T A 17 INTERGENIC homozygous 46165376 19 54709024 54709025 G A 36 INTERGENIC homozygous 46165377 19 54709596 54709597 G T 37 INTERGENIC homozygous 46165378 19 54709598 54709599 T G 37 INTERGENIC homozygous 46165379 19 54709613 54709614 C T 43 INTERGENIC homozygous 46165380 19 54709730 54709731 G A 33 INTERGENIC homozygous 46165381 19 54709735 54709736 G A 33 INTERGENIC homozygous 46165382 19 54709794 54709795 C G 34 INTERGENIC homozygous 46165383 19 54710046 54710047 A - 31 INTERGENIC homozygous 46165384 19 54710132 54710133 T C 29 INTERGENIC homozygous 46165385 19 54710217 54710218 C G 18 INTERGENIC homozygous 46165386 19 54710229 54710230 G A 23 INTERGENIC homozygous 46165387 19 54710266 54710267 G A 24 INTERGENIC homozygous 46165388 19 54710285 54710286 C T 29 INTERGENIC homozygous 46165389 19 54710433 54710434 A G 26 INTERGENIC homozygous 46165390 19 54710653 54710654 G GCACACACA 21 INTERGENIC homozygous 46165391 19 54710655 54710656 G A 30 INTERGENIC homozygous 46165392 19 54710673 54710674 T C 36 INTERGENIC homozygous 46165393 19 54710790 54710791 A G 23 INTERGENIC homozygous 46165394 19 54710793 54710794 A G 21 INTERGENIC homozygous 46165395 19 54711168 54711169 G GAAAAAAAAAAAAA 20 INTERGENIC homozygous 46410421 19 54711256 54711257 C G 25 INTERGENIC homozygous 46165398 19 54711260 54711261 T G 24 INTERGENIC homozygous 46165399 19 54711488 54711491 AAA --- 11 INTERGENIC homozygous 46165401 19 54711627 54711628 A C 23 INTERGENIC homozygous 46165403 19 54711901 54711902 T - 25 INTERGENIC homozygous 46165405 19 54711987 54711988 C T 22 INTERGENIC homozygous 46165406 19 54712143 54712144 G C 26 INTERGENIC homozygous 46165407 19 54712192 54712193 C A 32 INTERGENIC homozygous 46165408 19 54712266 54712267 G A 34 INTERGENIC homozygous 46165409 19 54712355 54712356 G A 25 INTERGENIC homozygous 46165410 19 54712373 54712374 A C 29 INTERGENIC homozygous 46165411 19 54712381 54712382 C G 25 INTERGENIC homozygous 46165412 19 54712596 54712597 G T 25 INTERGENIC homozygous 46165413 19 54712912 54712913 A ACAAGCAAG 6 INTERGENIC homozygous 46165415 19 54713072 54713073 T TGATAGATAGATAGATAGATAGATAGATAGATA 3 INTERGENIC homozygous 46566993 19 54713454 54713455 T A 32 INTERGENIC homozygous 46165417 19 54713547 54713548 A T 25 INTERGENIC homozygous 46165418 19 54713561 54713562 C G 28 INTERGENIC homozygous 46165419 19 54713563 54713564 A T 29 INTERGENIC homozygous 46165420 19 54713564 54713565 G C 27 INTERGENIC homozygous 46165421 19 54713750 54713751 G A 28 INTERGENIC homozygous 46165422 19 54713855 54713856 C T 31 INTERGENIC homozygous 46165423 19 54713899 54713900 C T 35 INTERGENIC homozygous 46165424 19 54713919 54713920 T C 29 INTERGENIC homozygous 46165425 19 54713988 54713989 A G 22 INTERGENIC homozygous 46165426 19 54714694 54714695 C G 33 GENIC homozygous 46165427 19 54715010 54715014 AAAA ---- 21 GENIC homozygous 46410435 19 54715016 54715017 A G 21 GENIC homozygous 46410437 19 54715017 54715018 A T 21 GENIC homozygous 46410439 19 54715018 54715019 A T 20 GENIC homozygous 46410441 19 54715033 54715034 G A 21 GENIC homozygous 46165430 19 54715192 54715193 G GTGGTAGAGCGCTTGCC 14 GENIC homozygous 46165431 19 54715231 54715234 AAA --- 6 GENIC heterozygous 46263332 19 54715255 54715256 G GAAA 13 GENIC heterozygous 46165433 19 54715433 54715434 T C 26 GENIC homozygous 46165434 19 54715823 54715824 C G 25 GENIC homozygous 46165435 19 54715838 54715839 T C 24 GENIC homozygous 46165436 19 54715888 54715889 G C 31 GENIC homozygous 46165437 19 54715913 54715914 G A 30 GENIC homozygous 46165438 19 54716132 54716133 A G 29 GENIC homozygous 46165439 19 54716276 54716277 G A 27 GENIC homozygous 46165440 19 54716551 54716552 C T 30 GENIC homozygous 46165441 19 54716851 54716853 GT -- 17 GENIC homozygous 46165442 19 54717129 54717131 AG -- 29 GENIC homozygous 46165443 19 54717628 54717629 T G 20 GENIC homozygous 46165444 19 54717946 54717947 A C 34 GENIC homozygous 46165445 19 54717953 54717954 C A 36 GENIC homozygous 46165446 19 54718074 54718075 C G 27 GENIC homozygous 46165447 19 54718140 54718141 G GCCCCT 24 GENIC homozygous 46165448 19 54718218 54718219 C G 25 GENIC homozygous 46165449 19 54718440 54718441 A C 28 GENIC homozygous 46165450 19 54718445 54718446 G T 31 GENIC homozygous 46165451 19 54718488 54718489 A G 31 GENIC homozygous 46165452 19 54718673 54718674 G C 24 GENIC homozygous 46165453 19 54718727 54718728 C T 25 INTERGENIC homozygous 46165454 19 54718928 54718929 T C 26 INTERGENIC homozygous 46165455 19 54718987 54718988 C G 22 INTERGENIC homozygous 46165456 19 54719110 54719111 G A 28 INTERGENIC homozygous 46165457 19 54719211 54719212 T G 30 INTERGENIC homozygous 46165458 19 54719305 54719306 A G 26 INTERGENIC homozygous 46165459 19 54719627 54719628 A G 29 INTERGENIC homozygous 46165461 19 54719751 54719752 T TGCCCTCACCTG 25 INTERGENIC homozygous 46165462 19 54719794 54719798 AATG ---- 26 INTERGENIC homozygous 46165463 19 54719819 54719820 A - 20 INTERGENIC homozygous 46165464 19 54719859 54719860 T C 23 INTERGENIC homozygous 46165465 19 54719892 54719893 C CCA 20 INTERGENIC homozygous 46165466 19 54720620 54720621 G GT 23 INTERGENIC homozygous 46165467 19 54720941 54720945 AAAA ---- 4 INTERGENIC heterozygous 46410451 19 54721211 54721212 G GA 11 INTERGENIC homozygous 46566995 19 54721749 54721750 G GA 13 INTERGENIC homozygous 46635162 19 54722107 54722108 T C 27 INTERGENIC homozygous 46165472 19 54722118 54722119 C T 28 INTERGENIC homozygous 46165473 19 54722228 54722229 A G 37 INTERGENIC homozygous 46165474 19 54722477 54722478 T C 12 INTERGENIC homozygous 46165476