chr start stop reference nuc variant nuc depth genic status zygosity variant ID 19 54694448 54694449 C T 9 GENIC homozygous 46308164 19 54694509 54694510 A AT 6 GENIC heterozygous 46410390 19 54694515 54694517 CC -- 3 GENIC homozygous 46165268 19 54694589 54694590 G C 13 GENIC homozygous 46165271 19 54694913 54694914 A G 20 INTERGENIC homozygous 46165272 19 54695002 54695003 A T 3 INTERGENIC homozygous 46165274 19 54695023 54695024 T A 1 INTERGENIC homozygous 46165276 19 54695025 54695026 T C 1 INTERGENIC homozygous 46165277 19 54695057 54695059 AA -- 4 INTERGENIC homozygous 46165278 19 54695226 54695227 A - 26 INTERGENIC possibly homozygous 46165280 19 54695588 54695589 T C 45 INTERGENIC homozygous 46165281 19 54695607 54695608 T C 41 INTERGENIC homozygous 46165282 19 54695615 54695616 T C 42 INTERGENIC homozygous 46165283 19 54695651 54695652 A C 31 INTERGENIC homozygous 46165284 19 54696109 54696110 C G 18 INTERGENIC homozygous 46165285 19 54698460 54698461 G T 18 INTERGENIC homozygous 46165291 19 54698558 54698559 G A 26 INTERGENIC homozygous 46165292 19 54698695 54698696 G A 31 INTERGENIC homozygous 46165293 19 54698715 54698716 A C 33 INTERGENIC homozygous 46165294 19 54698766 54698767 A G 21 INTERGENIC homozygous 46165295 19 54698906 54698907 T C 15 INTERGENIC homozygous 46165296 19 54698965 54698966 G A 14 INTERGENIC homozygous 46165297 19 54699186 54699187 C CCAAA 2 INTERGENIC homozygous 46165298 19 54699381 54699382 A G 32 INTERGENIC homozygous 46165299 19 54699422 54699423 C G 35 INTERGENIC homozygous 46165300 19 54699873 54699874 T A 21 INTERGENIC homozygous 46165301 19 54700250 54700251 G A 25 INTERGENIC homozygous 46165302 19 54700576 54700577 A C 39 INTERGENIC homozygous 46263264 19 54700895 54700896 C T 20 INTERGENIC homozygous 46165303 19 54700901 54700902 A G 19 INTERGENIC homozygous 46165304 19 54700934 54700935 G T 19 INTERGENIC homozygous 46165305 19 54701000 54701001 G A 7 INTERGENIC homozygous 46165307 19 54701002 54701003 G A 7 INTERGENIC homozygous 46165308 19 54701249 54701250 G A 2 INTERGENIC homozygous 46213851 19 54701252 54701253 T TACATATAC 2 INTERGENIC homozygous 46410394 19 54701375 54701379 TTTA ---- 5 INTERGENIC homozygous 46165310 19 54701396 54701397 C CT 6 INTERGENIC homozygous 46165311 19 54701556 54701557 C T 21 INTERGENIC homozygous 46165313 19 54701878 54701879 T A 16 INTERGENIC homozygous 46165314 19 54701969 54701970 G A 16 INTERGENIC homozygous 46165315 19 54701970 54701971 G C 16 INTERGENIC homozygous 46165316 19 54701972 54701973 T C 16 INTERGENIC homozygous 46165317 19 54701983 54701984 A G 20 INTERGENIC homozygous 46165318 19 54701999 54702000 A G 26 INTERGENIC homozygous 46165319 19 54702537 54702538 T A 28 INTERGENIC homozygous 46165320 19 54702539 54702540 T G 27 INTERGENIC homozygous 46165321 19 54702578 54702579 G A 21 INTERGENIC homozygous 46165322 19 54702588 54702589 T C 19 INTERGENIC homozygous 46165323 19 54702946 54702947 C G 15 INTERGENIC homozygous 46165324 19 54703305 54703306 C G 12 INTERGENIC homozygous 46165327 19 54703339 54703340 G GA 5 INTERGENIC homozygous 46165329 19 54703352 54703355 AAA --- 10 INTERGENIC homozygous 46165330 19 54703382 54703383 A G 15 INTERGENIC homozygous 46165331 19 54703393 54703394 A C 19 INTERGENIC homozygous 46165332 19 54704215 54704216 G T 24 INTERGENIC possibly homozygous 46165333 19 54704290 54704291 C T 28 INTERGENIC homozygous 46165334 19 54704305 54704306 A T 25 INTERGENIC homozygous 46165335 19 54704359 54704360 T C 22 INTERGENIC homozygous 46165336 19 54704415 54704416 T A 18 INTERGENIC homozygous 46165337 19 54704461 54704462 A C 13 INTERGENIC homozygous 46165338 19 54704547 54704548 T G 13 INTERGENIC homozygous 46165339 19 54704579 54704583 TTTT ---- 19 INTERGENIC homozygous 46165341 19 54704658 54704659 A AT 18 INTERGENIC homozygous 46165342 19 54704680 54704681 A C 14 INTERGENIC homozygous 46165343 19 54704825 54704826 T A 21 INTERGENIC homozygous 46165344 19 54705043 54705044 C T 21 INTERGENIC homozygous 46165345 19 54705489 54705490 C A 7 INTERGENIC homozygous 46165346 19 54705554 54705555 C T 10 INTERGENIC homozygous 46165347 19 54705699 54705700 T - 14 INTERGENIC homozygous 46165348 19 54705767 54705769 AA -- 20 INTERGENIC homozygous 46165349 19 54705940 54705941 A AG 21 INTERGENIC homozygous 46410396 19 54705941 54705942 A C 22 INTERGENIC homozygous 46410398 19 54705943 54705944 T TGGGCACGCAGAGGCACCCCTTTCCCCACACC 22 INTERGENIC homozygous 46410400 19 54705945 54705946 G GACTA 22 INTERGENIC homozygous 46410402 19 54706090 54706091 C A 28 INTERGENIC homozygous 46165351 19 54706440 54706441 C T 23 INTERGENIC homozygous 46165352 19 54706772 54706773 C G 7 INTERGENIC homozygous 46165353 19 54706821 54706822 G T 8 INTERGENIC homozygous 46165354 19 54706904 54706905 T A 2 INTERGENIC homozygous 46165355 19 54706998 54706999 G GTGT 9 INTERGENIC homozygous 46165358 19 54707052 54707053 T G 14 INTERGENIC homozygous 46165360 19 54707340 54707341 C T 26 INTERGENIC homozygous 46165361 19 54707481 54707482 T A 31 INTERGENIC homozygous 46165362 19 54707530 54707531 A G 27 INTERGENIC homozygous 46165363 19 54707599 54707600 G C 29 INTERGENIC possibly homozygous 46165364 19 54707686 54707687 C G 22 INTERGENIC homozygous 46165365 19 54707810 54707811 G A 27 INTERGENIC homozygous 46165366 19 54707811 54707812 T C 26 INTERGENIC homozygous 46165367 19 54707822 54707823 G A 25 INTERGENIC homozygous 46165368 19 54708083 54708084 C G 23 INTERGENIC homozygous 46165369 19 54708110 54708114 TCTC ---- 2 INTERGENIC heterozygous 46410408 19 54708155 54708157 GC -- 18 INTERGENIC heterozygous 46410413 19 54708184 54708185 G C 20 INTERGENIC homozygous 46165370 19 54708196 54708197 G T 19 INTERGENIC homozygous 46165371 19 54708337 54708338 C T 20 INTERGENIC homozygous 46165372 19 54708624 54708625 T G 20 INTERGENIC homozygous 46165373 19 54708705 54708706 G T 16 INTERGENIC homozygous 46165374 19 54708866 54708867 G C 14 INTERGENIC homozygous 46165375 19 54708886 54708887 T A 16 INTERGENIC homozygous 46165376 19 54709024 54709025 G A 27 INTERGENIC homozygous 46165377 19 54709596 54709597 G T 29 INTERGENIC homozygous 46165378 19 54709598 54709599 T G 29 INTERGENIC homozygous 46165379 19 54709613 54709614 C T 30 INTERGENIC homozygous 46165380 19 54709730 54709731 G A 32 INTERGENIC homozygous 46165381 19 54709735 54709736 G A 33 INTERGENIC homozygous 46165382 19 54709794 54709795 C G 24 INTERGENIC homozygous 46165383 19 54710132 54710133 T C 28 INTERGENIC homozygous 46165385 19 54710217 54710218 C G 16 INTERGENIC homozygous 46165386 19 54710229 54710230 G A 17 INTERGENIC homozygous 46165387 19 54710266 54710267 G A 19 INTERGENIC homozygous 46165388 19 54710285 54710286 C T 23 INTERGENIC homozygous 46165389 19 54710433 54710434 A G 14 INTERGENIC homozygous 46165390 19 54710653 54710654 G GCACACACA 14 INTERGENIC homozygous 46165391 19 54710655 54710656 G A 21 INTERGENIC homozygous 46165392 19 54710673 54710674 T C 16 INTERGENIC homozygous 46165393 19 54710790 54710791 A G 33 INTERGENIC homozygous 46165394 19 54710793 54710794 A G 33 INTERGENIC homozygous 46165395 19 54711627 54711628 A C 14 INTERGENIC homozygous 46165403 19 54711168 54711169 G GAAAAAAAAAAAAA 4 INTERGENIC heterozygous 46410421 19 54711256 54711257 C G 10 INTERGENIC homozygous 46165398 19 54711260 54711261 T G 10 INTERGENIC homozygous 46165399 19 54711488 54711491 AAA --- 9 INTERGENIC homozygous 46165401 19 54705705 54705706 T G 14 INTERGENIC homozygous 46464116 19 54711901 54711902 T - 9 INTERGENIC homozygous 46165405 19 54711987 54711988 C T 14 INTERGENIC homozygous 46165406 19 54712143 54712144 G C 26 INTERGENIC homozygous 46165407 19 54712192 54712193 C A 25 INTERGENIC homozygous 46165408 19 54712266 54712267 G A 24 INTERGENIC homozygous 46165409 19 54712355 54712356 G A 17 INTERGENIC homozygous 46165410 19 54712373 54712374 A C 17 INTERGENIC homozygous 46165411 19 54712381 54712382 C G 19 INTERGENIC homozygous 46165412 19 54712596 54712597 G T 29 INTERGENIC homozygous 46165413 19 54712912 54712913 A ACAAGCAAG 10 INTERGENIC homozygous 46165415 19 54713072 54713073 T TGATAGATAGATAGATAGATAGATA 5 INTERGENIC homozygous 46410429 19 54713255 54713256 A C 32 INTERGENIC homozygous 46263328 19 54713454 54713455 T A 11 INTERGENIC homozygous 46165417 19 54713561 54713562 C G 18 INTERGENIC homozygous 46165419 19 54713563 54713564 A T 19 INTERGENIC homozygous 46165420 19 54713564 54713565 G C 19 INTERGENIC homozygous 46165421 19 54713750 54713751 G A 30 INTERGENIC homozygous 46165422 19 54713988 54713989 A G 32 INTERGENIC homozygous 46165426 19 54714694 54714695 C G 18 GENIC homozygous 46165427 19 54714962 54714963 T G 23 GENIC homozygous 46263331 19 54715010 54715014 AAAA ---- 22 GENIC homozygous 46410435 19 54715016 54715017 A G 19 GENIC homozygous 46410437 19 54715017 54715018 A T 19 GENIC homozygous 46410439 19 54715018 54715019 A T 19 GENIC homozygous 46410441 19 54715033 54715034 G A 20 GENIC homozygous 46165430 19 54715244 54715245 A ATAG 2 GENIC heterozygous 46464118 19 54715250 54715256 GAATAG ------ 2 GENIC homozygous 46464120 19 54715433 54715434 T C 7 GENIC homozygous 46165434 19 54715438 54715439 G GATAA 4 GENIC homozygous 46263334 19 54715786 54715815 GGACCTGGGCTCTGCCAAGTCCCAGGGGA ----------------------------- 24 GENIC homozygous 46410443 19 54715823 54715824 C G 19 GENIC homozygous 46165435 19 54715838 54715839 T C 22 GENIC homozygous 46165436 19 54715888 54715889 G C 27 GENIC homozygous 46165437 19 54715913 54715914 G A 23 GENIC homozygous 46165438 19 54715918 54715919 G A 23 GENIC homozygous 46263336 19 54716343 54716344 A C 14 GENIC homozygous 46263337 19 54716891 54716892 A T 22 GENIC homozygous 46263338 19 54716956 54716957 C T 28 GENIC homozygous 46263341 19 54717002 54717003 G A 18 GENIC homozygous 46263342 19 54717092 54717093 G GA 26 GENIC homozygous 46263343 19 54717129 54717131 AG -- 21 GENIC homozygous 46165443 19 54717206 54717207 C A 17 GENIC homozygous 46263344 19 54717471 54717472 C T 28 GENIC homozygous 46263346 19 54717628 54717629 T G 28 GENIC homozygous 46165444 19 54717629 54717630 T G 28 GENIC homozygous 46263348 19 54718445 54718446 G T 17 GENIC homozygous 46165451 19 54718673 54718674 G C 28 GENIC homozygous 46165453 19 54718727 54718728 C T 32 INTERGENIC homozygous 46165454 19 54718850 54718851 G A 39 INTERGENIC homozygous 46263354 19 54718987 54718988 C G 37 INTERGENIC homozygous 46165456 19 54719211 54719212 T G 27 INTERGENIC homozygous 46165458 19 54719280 54719281 C A 27 INTERGENIC homozygous 46263359 19 54719305 54719306 A G 24 INTERGENIC homozygous 46165459 19 54719385 54719386 A T 16 INTERGENIC homozygous 46263360 19 54719534 54719537 GAG --- 21 INTERGENIC homozygous 46263362 19 54719827 54719828 A C 24 INTERGENIC homozygous 46213863 19 54719636 54719637 T A 27 INTERGENIC homozygous 46263364 19 54719678 54719679 G A 25 INTERGENIC homozygous 46263365 19 54720085 54720086 G A 26 INTERGENIC homozygous 46263368 19 54720582 54720583 T C 21 INTERGENIC homozygous 46263369 19 54720817 54720818 A ACT 9 INTERGENIC homozygous 46410445 19 54720868 54720869 T C 22 INTERGENIC homozygous 46263371 19 54720936 54720937 T A 16 INTERGENIC homozygous 46263372 19 54720941 54720945 AAAA ---- 4 INTERGENIC heterozygous 46410451 19 54721965 54721966 C CG 11 INTERGENIC homozygous 46263377 19 54722107 54722108 T A 22 INTERGENIC homozygous 46263380 19 54722118 54722119 C T 20 INTERGENIC homozygous 46165473 19 54722228 54722229 A G 34 INTERGENIC homozygous 46165474 19 54722393 54722394 G A 21 INTERGENIC homozygous 46263382 19 54722477 54722478 T C 16 INTERGENIC homozygous 46165476 19 54722557 54722559 CC -- 6 INTERGENIC heterozygous 46213866