chr start stop reference nuc variant nuc depth genic status zygosity variant ID 19 54356011 54356012 T - 20 GENIC homozygous 46164521 19 54357023 54357024 A G 18 GENIC homozygous 46164522 19 54357382 54357383 T C 21 GENIC homozygous 46164526 19 54358272 54358273 C T 24 GENIC homozygous 46164528 19 54358804 54358805 T C 31 GENIC homozygous 46164529 19 54359938 54359939 A G 22 GENIC homozygous 46164530 19 54360160 54360161 T C 20 GENIC homozygous 46164531 19 54360567 54360568 T G 16 GENIC homozygous 46164532 19 54360568 54360569 A G 16 GENIC homozygous 46164533 19 54360624 54360625 T TCCGCTC 7 GENIC homozygous 46164534 19 54361133 54361134 G A 5 GENIC homozygous 46164535 19 54361138 54361139 T A 5 GENIC homozygous 46164536 19 54361233 54361234 T C 14 GENIC homozygous 46164537 19 54361351 54361359 TTGTTTGT -------- 9 GENIC homozygous 46164538 19 54361410 54361411 C T 17 GENIC homozygous 46164539 19 54361525 54361526 A G 20 GENIC homozygous 46164540 19 54361738 54361739 C T 23 GENIC homozygous 46164541 19 54362167 54362168 C T 21 GENIC homozygous 46164543 19 54362235 54362236 T TTG 9 GENIC possibly homozygous 46164544 19 54362313 54362314 T TTGTGTGTG 6 GENIC heterozygous 46410167 19 54357305 54357306 A AC 21 GENIC homozygous 46262946 19 54357676 54357682 TTATTA ------ 6 GENIC homozygous 46262947 19 54362313 54362314 T TTG 6 GENIC heterozygous 46410163 19 54362313 54362314 T TTGTGTG 6 GENIC heterozygous 46410165 19 54362390 54362391 G A 7 GENIC homozygous 46164545 19 54362509 54362510 G GT 10 GENIC possibly homozygous 46262949 19 54362526 54362527 G A 10 GENIC homozygous 46164547 19 54362698 54362699 A C 24 GENIC homozygous 46164548 19 54362960 54362961 T C 17 GENIC homozygous 46164549 19 54363042 54363044 TT -- 13 GENIC homozygous 46262950 19 54363064 54363065 C T 19 GENIC homozygous 46164551 19 54363258 54363259 T C 16 GENIC homozygous 46164552 19 54363297 54363298 G A 14 GENIC homozygous 46164553 19 54363326 54363327 T C 16 GENIC homozygous 46164554 19 54364760 54364761 T C 12 GENIC homozygous 46164556 19 54364879 54364880 T C 14 GENIC homozygous 46164557 19 54364962 54364963 T C 15 GENIC homozygous 46164558 19 54365075 54365076 T A 17 GENIC homozygous 46164559 19 54365343 54365344 T C 28 GENIC homozygous 46164560 19 54365396 54365397 T C 31 GENIC homozygous 46164561 19 54365522 54365523 T C 18 GENIC homozygous 46164562 19 54365576 54365577 A G 11 GENIC homozygous 46164563 19 54365715 54365716 T C 10 GENIC homozygous 46164564 19 54365884 54365885 A G 22 GENIC homozygous 46164565 19 54365906 54365907 T C 25 GENIC homozygous 46164566 19 54365912 54365913 A G 26 GENIC homozygous 46164567 19 54366945 54366946 G A 16 GENIC homozygous 46164568 19 54367542 54367543 T C 15 GENIC homozygous 46164569 19 54367886 54367887 A G 15 GENIC homozygous 46164570 19 54368083 54368084 T C 2 GENIC homozygous 46410169 19 54368093 54368094 T - 4 GENIC homozygous 46164573 19 54368094 54368095 T G 4 GENIC homozygous 46410171 19 54368107 54368108 C G 4 GENIC homozygous 46164574 19 54368173 54368174 G T 8 GENIC homozygous 46164575 19 54368217 54368221 TCTC ---- 8 GENIC heterozygous 46262953 19 54368219 54368221 TC -- 8 GENIC possibly homozygous 46262954 19 54368269 54368270 T C 8 GENIC homozygous 46164576 19 54368855 54368856 C - 1 GENIC homozygous 46262955 19 54369079 54369080 C T 13 GENIC homozygous 46164578 19 54369189 54369190 G A 23 GENIC homozygous 46164579 19 54369244 54369245 A G 17 GENIC homozygous 46164581 19 54369428 54369429 T C 31 GENIC homozygous 46164582 19 54369891 54369892 A G 19 GENIC homozygous 46262956 19 54370211 54370212 T - 19 GENIC homozygous 46262957 19 54370465 54370466 G T 29 GENIC homozygous 46164584 19 54370562 54370563 G A 27 GENIC homozygous 46164585 19 54370677 54370678 T C 29 GENIC homozygous 46164586 19 54371163 54371164 G T 15 GENIC homozygous 46164587 19 54371280 54371281 A C 32 GENIC homozygous 46164588 19 54372782 54372783 C T 29 GENIC homozygous 46164589 19 54372829 54372830 A T 25 GENIC homozygous 46164590 19 54373258 54373259 A T 26 GENIC homozygous 46164591 19 54373259 54373260 G T 26 GENIC homozygous 46164592 19 54373402 54373403 G A 19 GENIC homozygous 46262958 19 54374000 54374001 C T 18 GENIC homozygous 46164594 19 54374129 54374130 T C 21 GENIC homozygous 46164595 19 54374542 54374543 C CA 11 GENIC heterozygous 46164596 19 54374542 54374543 C CAA 11 GENIC possibly homozygous 46262959 19 54374809 54374811 GG -- 4 GENIC homozygous 46164599 19 54374831 54374835 GAGA ---- 4 GENIC homozygous 46164600 19 54375322 54375330 GTGTGTGT -------- 7 GENIC heterozygous 46431516 19 54375324 54375330 GTGTGT ------ 7 GENIC heterozygous 46410175 19 54375751 54375752 A G 12 GENIC homozygous 46164603 19 54376616 54376617 A T 17 GENIC homozygous 46164604 19 54377048 54377051 GAA --- 10 GENIC possibly homozygous 46164606 19 54377060 54377061 A C 10 GENIC homozygous 46213818 19 54378196 54378197 C T 31 GENIC homozygous 46164607 19 54378393 54378394 A ATGTGTGTGTGTGTGTG 2 GENIC homozygous 46410177 19 54378450 54378451 T C 10 GENIC homozygous 46164609 19 54379024 54379025 T C 16 GENIC homozygous 46262962 19 54379083 54379084 A AT 10 GENIC homozygous 46164611 19 54379504 54379524 GTCTGTCTGTCTGTCTGTCT -------------------- 1 GENIC homozygous 46164613 19 54379586 54379587 G GTC 15 GENIC possibly homozygous 46164618 19 54380314 54380315 C T 22 GENIC homozygous 46164619 19 54380592 54380593 G A 25 GENIC homozygous 46164621 19 54380830 54380831 A T 17 GENIC homozygous 46262963 19 54381389 54381390 C CTCTCTCTCTCTCTCTTTCTCTCTCTCTCCT 7 GENIC homozygous 46410181 19 54381485 54381490 CTTTT ----- 15 GENIC homozygous 46164624 19 54382177 54382178 G GC 14 GENIC homozygous 46164625 19 54383228 54383229 C T 5 GENIC homozygous 46164627 19 54383244 54383246 AA -- 7 GENIC heterozygous 46410183 19 54383245 54383246 A - 7 GENIC heterozygous 46410185 19 54383640 54383641 G A 12 GENIC homozygous 46164630 19 54384655 54384656 T TAA 21 GENIC homozygous 46164631 19 54384762 54384763 T A 20 GENIC homozygous 46164632 19 54384844 54384845 T C 19 GENIC homozygous 46164633 19 54384987 54384988 T TG 22 GENIC homozygous 46164634 19 54385081 54385082 C A 17 GENIC homozygous 46164635 19 54386274 54386275 C T 27 GENIC homozygous 46164637 19 54387363 54387364 G A 20 GENIC homozygous 46262964 19 54387463 54387464 C T 21 GENIC homozygous 46262965 19 54388367 54388368 A AT 10 GENIC homozygous 46262966 19 54388524 54388525 C T 9 GENIC homozygous 46262967 19 54388526 54388527 A - 9 GENIC homozygous 46262968 19 54388528 54388529 T TA 10 GENIC homozygous 46262969 19 54390385 54390386 T - 25 GENIC homozygous 46410187 19 54390388 54390389 T TC 28 GENIC homozygous 46410189 19 54391832 54391833 C T 17 GENIC homozygous 46262971 19 54390722 54390723 G GT 13 GENIC homozygous 46164649 19 54391357 54391358 G C 22 GENIC homozygous 46164650 19 54368076 54368077 C G 2 GENIC homozygous 46274768 19 54380213 54380216 TTT --- 7 GENIC homozygous 46274769 19 54373568 54373569 G A 12 GENIC homozygous 46296717 19 54374971 54375161 AGTTCTCCTTCTCCCTCATTTTGCTAGTAATGGGGGGGAAGGAGAGAGGGAGGGAGAGAGAGAGAGAGAGAGAACACACAATGTGAAAGAGGTGGGGAAATTGATTTCCAATTTGCCAGGAGCTAGGCTGGGAGTGATAAGGGATGGCACCCTCTTCTGCTCTGTATAGTGTTCCTGTTTCCCCTTTGTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 25 GENIC possibly homozygous 46381489 19 54388529 54388530 C T 8 GENIC homozygous 46381493 19 54389756 54389757 G A 30 GENIC homozygous 46262970 19 54391850 54391851 T TA 15 GENIC homozygous 46262972 19 54392016 54392022 ACACAC ------ 6 GENIC homozygous 46164651 19 54392176 54392177 C T 17 GENIC homozygous 46164653 19 54392715 54392727 ATAATAATAATA ------------ 4 GENIC homozygous 46410191 19 54392901 54392902 T TACACACACAC 3 GENIC homozygous 46410193 19 54393534 54393535 G GTT 11 GENIC homozygous 46262976 19 54393870 54393871 C T 20 GENIC homozygous 46262977 19 54393924 54393925 A G 31 GENIC homozygous 46262978 19 54394483 54394484 C T 31 GENIC homozygous 46262979 19 54394765 54394766 A C 32 GENIC homozygous 46262980 19 54394790 54394791 G A 32 GENIC homozygous 46262981 19 54395119 54395120 G A 25 GENIC homozygous 46262982 19 54396091 54396092 T C 6 GENIC homozygous 46262983 19 54396181 54396182 C CTCTCCTCTCTCTCCTCTCTCTCCTCTCTCCTCTCTCTCTCTCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCT 4 GENIC homozygous 46431518 19 54396188 54396189 T TCCCCCCCTCTC 5 GENIC homozygous 46431520 19 54398164 54398165 C A 15 GENIC homozygous 46262984 19 54398184 54398185 A C 13 GENIC homozygous 46262985 19 54398193 54398194 G C 15 GENIC homozygous 46262986 19 54398252 54398253 C CTTCTTTTCTTTTCTTTTCTT 11 GENIC homozygous 46410197 19 54398910 54398911 T C 17 GENIC homozygous 46262988 19 54398975 54398976 C T 12 GENIC homozygous 46262989 19 54399261 54399262 C CT 18 GENIC homozygous 46164660 19 54399287 54399288 A G 24 GENIC homozygous 46262990 19 54399354 54399355 A T 24 GENIC homozygous 46262991 19 54399363 54399364 C T 25 GENIC homozygous 46262992 19 54399509 54399510 G A 15 GENIC homozygous 46262993 19 54399582 54399584 TT -- 10 GENIC homozygous 46410199 19 54399672 54399673 T C 10 GENIC homozygous 46262994 19 54399722 54399723 A - 12 GENIC homozygous 46262995 19 54399766 54399772 CTTTTT ------ 11 GENIC heterozygous 46410201 19 54399792 54399793 G A 12 GENIC homozygous 46262998 19 54399843 54399844 C T 18 GENIC homozygous 46262999 19 54399920 54399921 A G 23 GENIC homozygous 46263000 19 54400334 54400335 G A 28 GENIC homozygous 46164663 19 54401276 54401277 C G 30 GENIC homozygous 46263001 19 54401294 54401295 C T 23 GENIC homozygous 46263002 19 54402512 54402513 A AT 14 GENIC homozygous 46164664 19 54402552 54402553 T C 20 GENIC homozygous 46164665 19 54403430 54403431 C CT 16 GENIC homozygous 46263003 19 54403715 54403716 T G 13 GENIC homozygous 46164666 19 54403973 54403974 G GTTTTT 1 GENIC homozygous 46446344 19 54403974 54403975 G T 3 GENIC homozygous 46164668 19 54403987 54403988 G T 3 GENIC homozygous 46410205 19 54403992 54403993 C CT 5 GENIC homozygous 46263004 19 54404232 54404233 C CACAAAACAAA 9 GENIC homozygous 46410207 19 54405219 54405220 T - 17 GENIC heterozygous 46164672 19 54405656 54405776 AAAGAAAGGGAGCAACAGGCTGGGGATTTAGCTCAGTGGTAGAGCGCTTACCTAGGAAGCACAAGGCCCTGGGTTCGGTCCCCAGCTCCGAAAAAAAAGAACCAAAAAAAAAAAAAAAAA ------------------------------------------------------------------------------------------------------------------------ 38 GENIC homozygous 46381495 19 54405928 54405929 T C 33 GENIC homozygous 46263005