chr start stop reference nuc variant nuc depth genic status zygosity variant ID 18 39331926 39331927 C G 17 INTERGENIC homozygous 46425481 18 39333131 39333132 A G 29 INTERGENIC possibly homozygous 46425482 18 39333447 39333448 T A 28 INTERGENIC heterozygous 46425484 18 39333458 39333459 A C 30 INTERGENIC heterozygous 46425485 18 39333462 39333463 C T 29 INTERGENIC heterozygous 46425486 18 39333482 39333483 T G 35 INTERGENIC heterozygous 46425487 18 39333966 39333967 T A 25 INTERGENIC homozygous 46425488 18 39334254 39334255 G A 15 INTERGENIC possibly homozygous 46425489 18 39335102 39335103 A G 17 INTERGENIC homozygous 46425490 18 39338041 39338042 T C 26 INTERGENIC homozygous 46425491 18 39338042 39338043 G C 26 INTERGENIC homozygous 46425492 18 39338164 39338165 T G 22 INTERGENIC homozygous 46425493 18 39338910 39338911 G A 21 INTERGENIC homozygous 46425494 18 39340171 39340172 G A 18 INTERGENIC homozygous 46425496 18 39340184 39340185 A G 19 INTERGENIC homozygous 46425497 18 39340196 39340197 C A 19 INTERGENIC homozygous 46425498 18 39340204 39340205 C T 18 INTERGENIC homozygous 46425499 18 39340213 39340214 C A 19 INTERGENIC homozygous 46425500 18 39340217 39340218 G T 16 INTERGENIC homozygous 46425501 18 39340218 39340219 A T 16 INTERGENIC homozygous 46425502 18 39340223 39340224 G T 19 INTERGENIC homozygous 46425503 18 39340229 39340230 C T 17 INTERGENIC homozygous 46425504 18 39340240 39340241 C T 16 INTERGENIC homozygous 46425505 18 39340246 39340247 T G 14 INTERGENIC homozygous 46425506 18 39340260 39340261 C T 11 INTERGENIC homozygous 46425507 18 39340261 39340262 G T 11 INTERGENIC homozygous 46425508 18 39340271 39340272 G A 12 INTERGENIC homozygous 46425509 18 39340279 39340280 A G 9 INTERGENIC homozygous 46425510 18 39340288 39340289 C T 9 INTERGENIC homozygous 46425511 18 39340295 39340296 G C 7 INTERGENIC homozygous 46425512 18 39340302 39340303 G A 6 INTERGENIC homozygous 46425513 18 39340304 39340305 A T 6 INTERGENIC homozygous 46425514 18 39340306 39340307 A T 6 INTERGENIC homozygous 46425515 18 39340313 39340314 C T 7 INTERGENIC homozygous 46425516 18 39341517 39341518 G A 13 INTERGENIC homozygous 46425517 18 39347368 39347369 G A 23 INTERGENIC homozygous 46425518 18 39353311 39353312 C A 22 INTERGENIC homozygous 46425521 18 39354352 39354353 G A 27 INTERGENIC possibly homozygous 46425522 18 39354353 39354354 C A 29 INTERGENIC possibly homozygous 46425523 18 39354730 39354731 C T 15 INTERGENIC homozygous 46425524 18 39355451 39355452 T C 25 INTERGENIC homozygous 46425525 18 39355951 39355953 GA -- 15 INTERGENIC heterozygous 46425526 18 39355955 39355962 AATATTC ------- 15 INTERGENIC heterozygous 46425527 18 39355964 39355965 T C 22 INTERGENIC heterozygous 46425528 18 39356219 39356220 A G 27 INTERGENIC homozygous 46425529 18 39356756 39356758 AA -- 7 INTERGENIC homozygous 46425531 18 39356771 39356773 AA -- 13 INTERGENIC homozygous 46425532 18 39356811 39356812 T C 17 INTERGENIC homozygous 46590750 18 39357466 39357467 G A 28 INTERGENIC homozygous 46590751 18 39358072 39358073 C T 27 INTERGENIC homozygous 46425533 18 39358836 39358837 G T 29 INTERGENIC homozygous 46590752 18 39359325 39359326 A G 25 INTERGENIC homozygous 46425534 18 39362119 39362120 A - 6 INTERGENIC heterozygous 46425536 18 39362141 39362142 C CA 10 INTERGENIC homozygous 46425537 18 39364213 39364214 A G 25 INTERGENIC homozygous 46425538 18 39366105 39366106 G A 24 INTERGENIC homozygous 46425540 18 39367614 39367615 T A 21 INTERGENIC homozygous 46425541 18 39367928 39367929 A G 16 INTERGENIC homozygous 46425542 18 39369576 39369577 A - 24 INTERGENIC heterozygous 46425544 18 39369583 39369584 T TA 18 INTERGENIC heterozygous 46425545 18 39369584 39369588 GATA ---- 18 INTERGENIC heterozygous 46425546 18 39370859 39370860 G T 32 INTERGENIC homozygous 46590754 18 39371106 39371108 CC -- 7 INTERGENIC heterozygous 46425547 18 39371197 39371198 C T 22 INTERGENIC homozygous 46425549 18 39371305 39371306 C T 24 INTERGENIC homozygous 46425550 18 39371349 39371350 T C 30 INTERGENIC homozygous 46425551 18 39371432 39371433 C CT 23 INTERGENIC homozygous 46425552 18 39372001 39372002 A G 25 INTERGENIC homozygous 46425553 18 39374630 39374631 C CA 31 INTERGENIC homozygous 46590755 18 39389838 39389839 A AAT 5 INTERGENIC heterozygous 46590756 18 39391029 39391030 A - 20 INTERGENIC homozygous 46425555 18 39391564 39391565 A T 16 INTERGENIC homozygous 46425556 18 39393419 39393420 C T 36 INTERGENIC heterozygous 46590757 18 39393729 39393730 G C 44 INTERGENIC possibly homozygous 46425557 18 39393761 39393762 A C 38 INTERGENIC possibly homozygous 46425558 18 39393797 39393798 C T 40 INTERGENIC heterozygous 46425559 18 39393994 39393995 T C 35 INTERGENIC possibly homozygous 46425560 18 39394199 39394200 A G 29 INTERGENIC homozygous 46425561 18 39394406 39394407 G A 44 INTERGENIC heterozygous 46425562 18 39394470 39394471 T C 43 INTERGENIC heterozygous 46425563 18 39394576 39394577 C A 24 INTERGENIC heterozygous 46425564 18 39396753 39396754 T G 18 INTERGENIC homozygous 46425567 18 39396959 39396960 C T 41 INTERGENIC homozygous 46425568 18 39397132 39397133 T TA 23 INTERGENIC homozygous 46425569 18 39398469 39398470 T G 19 INTERGENIC homozygous 46425570 18 39400074 39400075 C CAA 8 INTERGENIC possibly homozygous 46425572 18 39400074 39400075 C CA 8 INTERGENIC heterozygous 46425573 18 39400087 39400088 G - 16 INTERGENIC heterozygous 46425574 18 39400093 39400094 G GAAGA 10 INTERGENIC possibly homozygous 46425575 18 39400994 39400995 T C 20 INTERGENIC homozygous 46425576 18 39401224 39401225 C CTA 12 INTERGENIC heterozygous 46425577 18 39401469 39401470 C T 20 INTERGENIC heterozygous 46590758 18 39401475 39401476 T TTAA 13 INTERGENIC heterozygous 46425578 18 39401479 39401480 T TAA 4 INTERGENIC heterozygous 46425579 18 39401521 39401522 A G 16 INTERGENIC heterozygous 46590759 18 39401555 39401556 T G 20 INTERGENIC heterozygous 46590760 18 39402118 39402119 G T 22 INTERGENIC homozygous 46425581 18 39402172 39402173 G T 16 INTERGENIC homozygous 46590761 18 39404597 39404598 A - 16 INTERGENIC heterozygous 46590763 18 39404693 39404694 A G 50 INTERGENIC heterozygous 46425582 18 39404694 39404695 G A 51 INTERGENIC heterozygous 46590764 18 39404696 39404697 A C 51 INTERGENIC heterozygous 46425583 18 39404711 39404712 C T 47 INTERGENIC heterozygous 46590765 18 39404826 39404827 T C 38 INTERGENIC possibly homozygous 46425584 18 39405127 39405128 G C 23 INTERGENIC homozygous 46425585 18 39406267 39406270 TTT --- 10 INTERGENIC heterozygous 46590766 18 39406268 39406270 TT -- 10 INTERGENIC heterozygous 46590767 18 39406326 39406327 C T 19 INTERGENIC heterozygous 46425587 18 39406626 39406627 G C 20 INTERGENIC homozygous 46425588 18 39406640 39406641 C CA 23 INTERGENIC homozygous 46425589 18 39406844 39406845 G A 22 INTERGENIC homozygous 46590768 18 39407779 39407780 C A 33 INTERGENIC homozygous 46425590 18 39408501 39408502 C A 16 INTERGENIC homozygous 46425591 18 39408637 39408638 T G 24 INTERGENIC homozygous 46425592 18 39408932 39408933 A T 23 INTERGENIC homozygous 46425593 18 39409628 39409629 A AC 24 INTERGENIC homozygous 46590769 18 39410693 39410694 T C 31 INTERGENIC homozygous 46425594 18 39410991 39410992 A G 38 INTERGENIC homozygous 46425595 18 39411198 39411199 C - 23 INTERGENIC homozygous 46425596 18 39412016 39412017 C T 15 INTERGENIC homozygous 46425597 18 39412155 39412156 T - 15 INTERGENIC homozygous 46425598 18 39413969 39413970 G GA 23 INTERGENIC possibly homozygous 46425599 18 39414538 39414539 C - 22 INTERGENIC homozygous 46590770 18 39414859 39414860 G A 22 INTERGENIC homozygous 46590771 18 39416425 39416427 TT -- 17 INTERGENIC homozygous 46425600 18 39416966 39416967 G A 17 INTERGENIC homozygous 46425601 18 39417230 39417231 G T 20 INTERGENIC homozygous 46425602 18 39417427 39417428 G GAA 22 INTERGENIC heterozygous 46425603 18 39417427 39417428 G GA 22 INTERGENIC heterozygous 46425604 18 39417427 39417428 G GAAA 22 INTERGENIC heterozygous 46590772 18 39418547 39418551 CATG ---- 23 INTERGENIC possibly homozygous 46425605 18 39418664 39418676 ACAGAGAGAGAG ------------ 24 INTERGENIC heterozygous 46425606 18 39419165 39419166 G T 20 INTERGENIC homozygous 46425607 18 39419168 39419169 G - 19 INTERGENIC homozygous 46425608 18 39419175 39419176 A - 20 INTERGENIC homozygous 46425609 18 39421720 39421721 T G 17 INTERGENIC homozygous 46590773 18 39419702 39419703 A G 17 INTERGENIC homozygous 46425610 18 39420870 39420871 T G 23 INTERGENIC possibly homozygous 46425611 18 39421284 39421285 T C 29 INTERGENIC homozygous 46425613 18 39422053 39422054 C T 17 INTERGENIC homozygous 46425615 18 39423141 39423142 C T 17 INTERGENIC heterozygous 46425616 18 39423520 39423521 G A 49 INTERGENIC heterozygous 46425617 18 39424736 39424737 C T 20 INTERGENIC homozygous 46425618 18 39425147 39425148 G A 40 INTERGENIC homozygous 46425619 18 39425191 39425192 A C 33 INTERGENIC homozygous 46425620 18 39425993 39425994 G C 24 INTERGENIC homozygous 46425621 18 39426011 39426012 T C 20 INTERGENIC homozygous 46425622 18 39426552 39426553 A - 13 INTERGENIC possibly homozygous 46425623 18 39426595 39426596 A T 16 INTERGENIC homozygous 46425624 18 39426686 39426687 A G 9 INTERGENIC homozygous 46425625 18 39426988 39426989 A T 24 INTERGENIC homozygous 46590774 18 39427603 39427604 G A 12 INTERGENIC homozygous 46425626 18 39428252 39428253 G A 25 INTERGENIC homozygous 46425627 18 39428875 39428876 C G 20 INTERGENIC homozygous 46425628 18 39428879 39428880 T G 18 INTERGENIC homozygous 46425629 18 39429635 39429636 T C 33 INTERGENIC homozygous 46425630 18 39430227 39430228 T - 18 INTERGENIC possibly homozygous 46590775 18 39430234 39430235 T A 25 INTERGENIC homozygous 46425631 18 39430383 39430384 A G 23 INTERGENIC homozygous 46425632 18 39430807 39430810 TTT --- 18 INTERGENIC heterozygous 46425634 18 39430808 39430810 TT -- 18 INTERGENIC possibly homozygous 46590776 18 39441239 39441240 T C 31 INTERGENIC heterozygous 46425635 18 39441793 39441794 G A 12 INTERGENIC homozygous 46425637 18 39442213 39442214 T C 22 INTERGENIC homozygous 46425638 18 39442455 39442456 G GGTCTTT 11 INTERGENIC homozygous 46425639 18 39442577 39442578 T A 21 INTERGENIC homozygous 46425640 18 39442896 39442897 G C 24 INTERGENIC possibly homozygous 46425641 18 39444518 39444519 G T 36 INTERGENIC possibly homozygous 46590777 18 39444772 39444773 C A 24 INTERGENIC possibly homozygous 46590778 18 39445945 39445946 G A 40 INTERGENIC homozygous 46425644 18 39446023 39446024 A G 28 INTERGENIC homozygous 46425645 18 39446835 39446836 T C 48 INTERGENIC homozygous 46425646 18 39447087 39447088 C A 32 INTERGENIC homozygous 46425647 18 39447819 39447820 C T 30 INTERGENIC homozygous 46590779 18 39448277 39448278 T G 34 INTERGENIC homozygous 46425648 18 39448354 39448355 A T 30 INTERGENIC homozygous 46425649 18 39448834 39448835 C T 22 INTERGENIC homozygous 46590780 18 39449553 39449554 T C 14 INTERGENIC homozygous 46425650 18 39450494 39450495 T C 24 INTERGENIC homozygous 46425651 18 39451175 39451176 A G 33 INTERGENIC homozygous 46425652 18 39451263 39451264 A T 21 INTERGENIC homozygous 46590781 18 39451278 39451279 G A 18 INTERGENIC homozygous 46425654 18 39451839 39451847 CACACACA -------- 8 INTERGENIC homozygous 46590782 18 39452721 39452722 A ATTCCTTCAACGG 9 INTERGENIC homozygous 46425657 18 39453237 39453238 C T 10 INTERGENIC homozygous 46425658 18 39454497 39454501 ACAC ---- 10 INTERGENIC possibly homozygous 46425659 18 39454499 39454501 AC -- 10 INTERGENIC heterozygous 46425660 18 39454625 39454626 T TTTTGTTTG 14 INTERGENIC heterozygous 46425661 18 39454625 39454626 T TTTTG 14 INTERGENIC possibly homozygous 46590784 18 39456277 39456278 G T 25 INTERGENIC possibly homozygous 46425662 18 39456279 39456280 A ATG 7 INTERGENIC homozygous 46425663 18 39456692 39456693 T G 42 INTERGENIC homozygous 46425664 18 39456780 39456781 G A 25 INTERGENIC homozygous 46425665 18 39456825 39456826 T C 20 INTERGENIC homozygous 46425666 18 39457452 39457453 C T 18 INTERGENIC homozygous 46425667 18 39457605 39457606 T TA 34 INTERGENIC homozygous 46590785 18 39458379 39458380 T C 25 INTERGENIC homozygous 46425668 18 39458820 39458821 A G 27 INTERGENIC homozygous 46425669 18 39459060 39459061 C T 26 INTERGENIC homozygous 46425670 18 39459283 39459284 G GACACACACACACAC 3 INTERGENIC homozygous 46425671 18 39459637 39459638 C T 25 INTERGENIC homozygous 46425672 18 39459639 39459640 T C 25 INTERGENIC homozygous 46425673 18 39460050 39460051 C T 29 INTERGENIC homozygous 46425674 18 39460145 39460146 T A 27 INTERGENIC homozygous 46425675 18 39462036 39462037 G A 37 INTERGENIC heterozygous 46425678 18 39462119 39462120 A T 55 INTERGENIC heterozygous 46425679 18 39462137 39462138 T C 49 INTERGENIC heterozygous 46425680 18 39462245 39462246 G GATATGTGTAGCCACTTCA 3 INTERGENIC homozygous 46425682 18 39463917 39463918 C T 21 INTERGENIC possibly homozygous 46425683 18 39464343 39464344 T C 27 INTERGENIC possibly homozygous 46590788 18 39464626 39464627 C G 16 INTERGENIC possibly homozygous 46425685 18 39464659 39464660 C T 9 INTERGENIC homozygous 46425686 18 39464680 39464681 C A 6 INTERGENIC homozygous 46590789 18 39464792 39464793 G T 19 INTERGENIC heterozygous 46590791 18 39464805 39464806 G A 18 INTERGENIC heterozygous 46590792 18 39464834 39464835 T C 28 INTERGENIC heterozygous 46425687 18 39465765 39465766 G A 51 INTERGENIC heterozygous 46425688 18 39465843 39465844 C T 69 INTERGENIC heterozygous 46425689 18 39465905 39465906 G A 52 INTERGENIC heterozygous 46425690 18 39465952 39465953 T C 37 INTERGENIC heterozygous 46425691 18 39466406 39466407 A - 26 INTERGENIC homozygous 46425692 18 39467561 39467562 C T 27 INTERGENIC homozygous 46425693 18 39467606 39467607 G A 29 INTERGENIC homozygous 46425694 18 39467950 39467951 C T 27 INTERGENIC homozygous 46425695 18 39470197 39470198 C A 26 INTERGENIC homozygous 46425701 18 39470346 39470347 A C 13 INTERGENIC homozygous 46425702 18 39472650 39472651 T C 24 INTERGENIC homozygous 46425703 18 39473502 39473503 C CAG 19 INTERGENIC homozygous 46425704 18 39476097 39476100 AAA --- 17 INTERGENIC homozygous 46425706 18 39478337 39478338 A AC 17 INTERGENIC possibly homozygous 46425708 18 39478370 39478371 C CTT 14 INTERGENIC possibly homozygous 46590795 18 39478371 39478372 C T 15 INTERGENIC possibly homozygous 46590796 18 39478374 39478375 C T 18 INTERGENIC homozygous 46425709 18 39478597 39478598 G A 16 INTERGENIC homozygous 46425710 18 39479027 39479028 T C 21 INTERGENIC homozygous 46425711 18 39460926 39460927 C T 37 INTERGENIC homozygous 46759077 18 39429042 39429043 T - 2 INTERGENIC homozygous 46759076