chr start stop reference nuc variant nuc depth genic status zygosity variant ID 17 52295549 52295550 A G 9 INTERGENIC homozygous 47130773 17 52297303 52297304 T C 12 INTERGENIC homozygous 47130775 17 52298764 52298765 T C 21 INTERGENIC possibly homozygous 47130776 17 52299734 52299740 CACACA ------ 1 GENIC homozygous 47130777 17 52305712 52305713 A T 15 INTERGENIC homozygous 47130782 17 52306345 52306346 G T 8 INTERGENIC heterozygous 47591913 17 52307005 52307006 G C 2 INTERGENIC heterozygous 47130783 17 52307029 52307030 C - 1 INTERGENIC homozygous 47130785 17 52308502 52308503 C T 8 INTERGENIC homozygous 47130787 17 52308564 52308565 C T 14 INTERGENIC possibly homozygous 47130788 17 52311285 52311286 A AAAG 2 INTERGENIC homozygous 47742534 17 52313673 52313674 C A 19 INTERGENIC homozygous 47130793 17 52314855 52314856 A T 9 INTERGENIC homozygous 47130794 17 52315906 52315907 A - 1 INTERGENIC homozygous 47130795 17 52316295 52316296 G A 19 INTERGENIC homozygous 47130796 17 52316393 52316394 T - 7 INTERGENIC homozygous 47130797 17 52317880 52317881 A G 4 INTERGENIC heterozygous 47130799 17 52319596 52319597 G A 7 INTERGENIC homozygous 47130800 17 52321173 52321174 C T 23 INTERGENIC homozygous 47130803 17 52321394 52321395 T C 5 INTERGENIC heterozygous 47130807 17 52321552 52321553 G T 5 INTERGENIC homozygous 47130808 17 52321842 52321845 AAA --- 2 INTERGENIC heterozygous 47130809 17 52322389 52322390 G A 11 INTERGENIC homozygous 47130811 17 52322699 52322700 G A 8 INTERGENIC homozygous 47130812 17 52322990 52322991 C G 14 INTERGENIC possibly homozygous 47130813 17 52323125 52323126 G A 1 INTERGENIC homozygous 47130814 17 52323127 52323128 G A 1 INTERGENIC homozygous 47130815 17 52323852 52323853 G T 8 INTERGENIC homozygous 47130816 17 52323918 52323919 C A 9 INTERGENIC homozygous 47130817 17 52324164 52324165 A G 8 INTERGENIC homozygous 47130818 17 52326850 52326851 T - 6 INTERGENIC homozygous 47130819 17 52328685 52328686 T TG 2 INTERGENIC homozygous 47130820 17 52329173 52329174 C CT 5 INTERGENIC heterozygous 47130821 17 52332132 52332133 G A 11 INTERGENIC homozygous 47130827 17 52333622 52333623 T C 14 INTERGENIC homozygous 47130828 17 52333883 52333884 C G 15 INTERGENIC possibly homozygous 47130829 17 52335276 52335277 C T 9 INTERGENIC homozygous 47130830 17 52342850 52342851 T C 12 INTERGENIC heterozygous 47130834 17 52343048 52343049 T C 2 INTERGENIC homozygous 47130835 17 52343058 52343059 T C 2 INTERGENIC homozygous 47130836 17 52343668 52343669 C G 15 INTERGENIC possibly homozygous 47130837 17 52343836 52343837 T A 19 INTERGENIC possibly homozygous 47130838 17 52344009 52344010 G A 13 INTERGENIC homozygous 47130839 17 52344150 52344151 A G 7 INTERGENIC homozygous 47130840 17 52344349 52344350 A - 19 INTERGENIC homozygous 47130841 17 52344668 52344669 C T 3 INTERGENIC heterozygous 47130842 17 52344994 52344995 C T 14 INTERGENIC homozygous 47130843 17 52347105 52347106 T A 11 INTERGENIC heterozygous 47130844 17 52347801 52347802 C T 12 INTERGENIC possibly homozygous 47130845 17 52347824 52347825 G A 15 INTERGENIC homozygous 47130846 17 52307031 52307032 C T 1 INTERGENIC homozygous 47709833 17 52320045 52320158 CTGTTAATCTTTTTTTTTTTTTCTTTTTTTTTTTGGAGCTGGGGACCGAACCCAGGGCCTTGCGCTTCCTAGGCAAGCGCTCTACCACTGAGCTAAATCCCCAACCCCCGGTA ----------------------------------------------------------------------------------------------------------------- 14 INTERGENIC heterozygous 47709839 17 52353235 52353236 C T 6 GENIC homozygous 47130847 17 52353743 52353744 T C 19 GENIC heterozygous 47130848 17 52355000 52355001 A ATCCT 3 GENIC heterozygous 47742542 17 52355616 52355617 T C 2 GENIC homozygous 47130853 17 52357451 52357452 C T 14 GENIC possibly homozygous 47130855 17 52358186 52358187 G GT 11 GENIC homozygous 47130856 17 52359466 52359467 A AT 4 GENIC homozygous 47130857 17 52359496 52359497 T C 1 GENIC homozygous 47130858 17 52359778 52359779 T C 10 GENIC homozygous 47130859 17 52360543 52360544 G T 21 GENIC homozygous 47130860 17 52361069 52361070 C G 13 GENIC homozygous 47130861 17 52361615 52361616 A C 8 GENIC homozygous 47130862 17 52362449 52362450 T - 12 GENIC possibly homozygous 47130863 17 52362709 52362710 A G 11 GENIC homozygous 47130864 17 52362900 52362901 T - 3 GENIC homozygous 47130866 17 52363634 52363635 G A 15 GENIC homozygous 47130867 17 52364004 52364005 T C 17 GENIC possibly homozygous 47130868 17 52364830 52364831 A G 11 GENIC homozygous 47130869 17 52366127 52366128 A G 9 GENIC heterozygous 47130871 17 52368640 52368641 G C 13 GENIC possibly homozygous 47130877 17 52366140 52366141 T C 6 GENIC homozygous 47130872 17 52367259 52367260 G C 10 GENIC homozygous 47130874 17 52367383 52367384 C A 16 GENIC homozygous 47130875 17 52368157 52368158 C G 3 GENIC heterozygous 47130876 17 52368734 52368735 T C 1 GENIC homozygous 47709845 17 52368778 52368792 CACACACACACACC -------------- 3 GENIC heterozygous 47742551 17 52368877 52368878 C A 4 GENIC heterozygous 47130884 17 52368991 52368992 C CCA 1 GENIC homozygous 47130886 17 52369206 52369207 G A 5 GENIC homozygous 47130889 17 52369745 52369746 T - 9 GENIC homozygous 47130891 17 52371054 52371055 G A 8 GENIC homozygous 47130892 17 52371811 52371812 T C 15 GENIC homozygous 47130893 17 52371997 52371998 T C 10 GENIC homozygous 47130894 17 52374969 52374970 A T 14 INTERGENIC heterozygous 47130901 17 52377049 52377050 T TAC 2 INTERGENIC homozygous 47130907 17 52377083 52377084 C CAG 5 INTERGENIC homozygous 47130908 17 52377196 52377197 T C 6 INTERGENIC homozygous 47130909 17 52377290 52377291 A G 10 INTERGENIC homozygous 47130910 17 52378017 52378018 C T 6 INTERGENIC homozygous 47130911 17 52378026 52378027 T - 5 INTERGENIC homozygous 47130912 17 52379277 52379278 T C 11 INTERGENIC homozygous 47130913 17 52379434 52379435 C T 15 INTERGENIC heterozygous 47130914 17 52379763 52379764 G A 15 INTERGENIC possibly homozygous 47130915 17 52379858 52379859 T C 13 INTERGENIC heterozygous 47130916 17 52381359 52381360 C A 18 INTERGENIC homozygous 47130917 17 52382164 52382165 C T 3 INTERGENIC homozygous 47130918 17 52382174 52382175 A G 6 INTERGENIC homozygous 47130919 17 52382956 52382957 G GA 17 INTERGENIC homozygous 47130924 17 52383041 52383042 G A 9 INTERGENIC possibly homozygous 47130925 17 52383096 52383097 T C 11 INTERGENIC possibly homozygous 47130926 17 52383581 52383582 A C 17 INTERGENIC possibly homozygous 47130927 17 52384600 52384601 C A 13 INTERGENIC homozygous 47130928 17 52385299 52385300 G GCTCCAGTTAGCACTTACAGAATCCCCAC 1 INTERGENIC homozygous 47709847 17 52385521 52385522 A AG 4 INTERGENIC heterozygous 47130930 17 52385812 52385813 A AACAC 4 INTERGENIC homozygous 47130931 17 52386578 52386579 T C 1 INTERGENIC homozygous 47130936 17 52387151 52387154 AAC --- 5 INTERGENIC homozygous 47130937 17 52387321 52387322 G A 10 INTERGENIC homozygous 47130938 17 52387737 52387739 TT -- 1 INTERGENIC homozygous 47130939 17 52388107 52388108 C T 10 INTERGENIC homozygous 47130940 17 52388222 52388223 C T 23 INTERGENIC possibly homozygous 47130941 17 52388434 52388435 G A 9 INTERGENIC homozygous 47130942 17 52388589 52388590 T TA 2 INTERGENIC homozygous 47130943 17 52388643 52388644 G GA 6 INTERGENIC homozygous 47130944 17 52388712 52388713 A - 4 INTERGENIC homozygous 47130945 17 52388998 52388999 T C 13 INTERGENIC homozygous 47130946 17 52389097 52389098 C T 16 INTERGENIC homozygous 47130947 17 52390253 52390254 T A 20 INTERGENIC homozygous 47130948 17 52390377 52390384 GTGAAAT ------- 4 INTERGENIC homozygous 47130949 17 52390511 52390512 G A 12 INTERGENIC homozygous 47130950 17 52390722 52390723 C T 15 INTERGENIC homozygous 47130951 17 52391639 52391640 G A 7 INTERGENIC homozygous 47130952 17 52391776 52391777 G C 9 INTERGENIC heterozygous 47130953 17 52392054 52392055 G C 14 INTERGENIC possibly homozygous 47130954 17 52392217 52392218 G A 14 INTERGENIC homozygous 47130955 17 52392607 52392608 A G 11 INTERGENIC homozygous 47130956 17 52393797 52393798 A G 11 INTERGENIC homozygous 47130957 17 52394059 52394065 AGAGCG ------ 5 INTERGENIC homozygous 47130959 17 52394466 52394467 G A 11 INTERGENIC possibly homozygous 47130961 17 52395050 52395051 C T 4 INTERGENIC homozygous 47130962 17 52395159 52395160 C T 7 INTERGENIC homozygous 47130963 17 52395390 52395391 A C 15 INTERGENIC possibly homozygous 47130964 17 52395758 52395759 G C 9 INTERGENIC heterozygous 47130965 17 52395924 52395925 T C 15 INTERGENIC possibly homozygous 47130966 17 52396606 52396607 T C 8 INTERGENIC homozygous 47130967 17 52396808 52396809 T A 18 INTERGENIC possibly homozygous 47130968 17 52397269 52397270 C CTTGGTCTGTG 1 INTERGENIC homozygous 47130969 17 52397322 52397323 G A 2 INTERGENIC homozygous 47130970 17 52397535 52397536 T C 21 INTERGENIC possibly homozygous 47130971 17 52397733 52397734 C G 14 INTERGENIC homozygous 47130972 17 52397805 52397806 G A 12 INTERGENIC possibly homozygous 47130973 17 52398330 52398331 C T 10 INTERGENIC possibly homozygous 47130974 17 52398340 52398341 C T 8 INTERGENIC homozygous 47130975 17 52398373 52398374 T C 7 INTERGENIC homozygous 47130976 17 52398728 52398729 G T 22 INTERGENIC homozygous 47130977 17 52398842 52398843 G C 13 INTERGENIC homozygous 47130978 17 52399495 52399496 C T 13 INTERGENIC homozygous 47130979 17 52399901 52399902 A G 15 INTERGENIC homozygous 47130980 17 52400369 52400370 C T 13 INTERGENIC possibly homozygous 47130981 17 52400871 52400872 A G 1 INTERGENIC homozygous 47130983 17 52401263 52401264 G A 10 INTERGENIC heterozygous 47130986 17 52401342 52401343 T C 11 INTERGENIC homozygous 47130987 17 52401443 52401444 A G 6 INTERGENIC homozygous 47130988 17 52401460 52401462 TT -- 1 INTERGENIC homozygous 47130989 17 52401683 52401684 G GTT 4 INTERGENIC heterozygous 47130992 17 52401683 52401684 G GT 4 INTERGENIC heterozygous 47327550 17 52402587 52402588 A G 10 INTERGENIC homozygous 47130994 17 52402975 52402976 G A 10 INTERGENIC heterozygous 47130997 17 52403715 52403716 C A 11 INTERGENIC possibly homozygous 47130998 17 52403956 52403957 T - 10 INTERGENIC homozygous 47130999 17 52404043 52404044 A - 10 INTERGENIC possibly homozygous 47131000 17 52404316 52404317 G A 11 INTERGENIC heterozygous 47131001 17 52405413 52405414 G T 14 INTERGENIC homozygous 47131002 17 52406129 52406130 C T 11 INTERGENIC homozygous 47131003 17 52407722 52407723 T - 11 INTERGENIC possibly homozygous 47131005 17 52407789 52407790 C T 10 INTERGENIC homozygous 47131006 17 52407986 52407988 AT -- 4 INTERGENIC homozygous 47131007 17 52408004 52408005 C T 3 INTERGENIC homozygous 47131008 17 52408218 52408219 G A 6 INTERGENIC heterozygous 47131009 17 52408728 52408729 C T 15 INTERGENIC homozygous 47131010 17 52409083 52409084 T G 12 INTERGENIC homozygous 47131011 17 52409765 52409766 G A 15 INTERGENIC possibly homozygous 47131012 17 52410261 52410262 C - 15 INTERGENIC heterozygous 47709851 17 52410764 52410765 T C 1 INTERGENIC homozygous 47131017 17 52411292 52411293 T C 14 INTERGENIC homozygous 47131018 17 52412664 52412665 T C 22 INTERGENIC homozygous 47131019 17 52413210 52413211 T G 2 INTERGENIC homozygous 47131020 17 52413699 52413700 G A 11 INTERGENIC possibly homozygous 47131021 17 52413719 52413720 T C 15 INTERGENIC homozygous 47131022 17 52413753 52413754 C T 11 INTERGENIC homozygous 47131023 17 52414180 52414181 T C 5 INTERGENIC homozygous 47131024 17 52414323 52414324 G C 14 INTERGENIC homozygous 47131025 17 52417194 52417195 C T 12 INTERGENIC possibly homozygous 47131026 17 52417982 52417983 G T 5 INTERGENIC homozygous 47131027 17 52418296 52418297 G A 10 INTERGENIC homozygous 47131028 17 52418690 52418691 C T 12 INTERGENIC possibly homozygous 47131029 17 52420360 52420361 C CAGATAGCACAATTGCTGGGCTCTTATCAGCT 1 INTERGENIC homozygous 47709855 17 52421149 52421150 T G 9 INTERGENIC possibly homozygous 47131030 17 52421564 52421565 C G 14 INTERGENIC homozygous 47131031 17 52421905 52421906 C T 8 INTERGENIC possibly homozygous 47131032 17 52421974 52421975 A - 6 INTERGENIC homozygous 47131033 17 52422810 52422811 G GA 7 INTERGENIC heterozygous 47131036 17 52424721 52424722 T C 16 INTERGENIC homozygous 47131038 17 52426012 52426013 A G 10 INTERGENIC homozygous 47131039 17 52426033 52426034 T - 3 INTERGENIC homozygous 47131040 17 52426803 52426804 A G 4 INTERGENIC homozygous 47131041 17 52426995 52426996 G - 6 INTERGENIC homozygous 47131042 17 52427260 52427261 T C 18 INTERGENIC homozygous 47131046 17 52427883 52427884 G A 2 INTERGENIC homozygous 47131047 17 52428440 52428441 T C 9 INTERGENIC homozygous 47131048 17 52429069 52429070 T TA 10 INTERGENIC possibly homozygous 47131049 17 52429250 52429251 A T 16 INTERGENIC homozygous 47131050 17 52429445 52429446 G A 8 INTERGENIC homozygous 47131051 17 52429936 52429937 A - 7 INTERGENIC homozygous 47131052 17 52430359 52430360 A T 2 INTERGENIC heterozygous 47131053 17 52432101 52432102 C T 13 INTERGENIC homozygous 47131054 17 52432129 52432130 A G 5 INTERGENIC heterozygous 47131055 17 52432368 52432369 T C 5 INTERGENIC homozygous 47131058 17 52435006 52435007 G GCACACACA 1 INTERGENIC homozygous 47709857 17 52435722 52435724 AA -- 6 INTERGENIC homozygous 47131061 17 52435988 52435989 T G 16 INTERGENIC homozygous 47131062 17 52436812 52436813 A G 15 INTERGENIC homozygous 47131064 17 52437228 52437229 A G 12 INTERGENIC possibly homozygous 47131065 17 52437423 52437424 T C 12 INTERGENIC homozygous 47131066 17 52444350 52444351 G C 9 INTERGENIC homozygous 47131077 17 52438097 52438100 GTA --- 5 INTERGENIC homozygous 47131071 17 52438104 52438105 T C 6 INTERGENIC homozygous 47131072 17 52438219 52438220 C T 7 INTERGENIC homozygous 47131073 17 52438628 52438629 G A 21 INTERGENIC possibly homozygous 47131074 17 52442656 52442657 A G 11 INTERGENIC possibly homozygous 47131076 17 52430787 52430788 A - 16 INTERGENIC heterozygous 47831790 17 52446398 52446399 C T 6 INTERGENIC homozygous 47131081 17 52446983 52446984 A G 15 INTERGENIC possibly homozygous 47131082 17 52447098 52447099 A G 15 INTERGENIC homozygous 47131083 17 52447624 52447625 A T 7 INTERGENIC homozygous 47131084 17 52447888 52447889 G A 8 INTERGENIC homozygous 47131085 17 52450036 52450037 A G 8 INTERGENIC homozygous 47131086 17 52450495 52450496 T - 2 INTERGENIC homozygous 47131087 17 52451067 52451068 T G 7 INTERGENIC possibly homozygous 47131088 17 52453071 52453072 A AT 10 INTERGENIC homozygous 47131090 17 52453158 52453159 C T 3 INTERGENIC heterozygous 47131091 17 52475298 52475299 T TGTGC 2 INTERGENIC homozygous 47131093 17 52475728 52475729 A - 1 INTERGENIC homozygous 47542011 17 52509550 52509551 G C 8 INTERGENIC homozygous 47131100 17 52520195 52520196 G T 4 INTERGENIC heterozygous 47131102 17 52520224 52520225 G T 6 INTERGENIC homozygous 47131103 17 52532144 52532145 A - 1 INTERGENIC homozygous 47131104 17 52532616 52532617 T TA 11 INTERGENIC homozygous 47131105 17 52543574 52543575 A G 14 INTERGENIC homozygous 47131106 17 52543773 52543774 A G 16 INTERGENIC homozygous 47131107 17 52544646 52544647 A T 9 INTERGENIC possibly homozygous 47131108 17 52544738 52544739 C G 1 INTERGENIC homozygous 47131109 17 52544740 52544741 G - 1 INTERGENIC homozygous 47131110 17 52544745 52544746 G - 1 INTERGENIC homozygous 47131111 17 52544751 52544752 C - 1 INTERGENIC homozygous 47131112 17 52545215 52545216 C CA 8 INTERGENIC possibly homozygous 47131113 17 52545274 52545275 G A 12 INTERGENIC homozygous 47131114 17 52546744 52546745 C T 12 INTERGENIC homozygous 47131116 17 52547176 52547177 A G 14 INTERGENIC heterozygous 47131117 17 52547216 52547217 A AT 6 INTERGENIC homozygous 47131118 17 52547727 52547728 C T 17 INTERGENIC homozygous 47131119 17 52548407 52548408 G C 6 INTERGENIC homozygous 47131120 17 52548546 52548547 A C 4 INTERGENIC homozygous 47131121 17 52548547 52548548 G C 5 INTERGENIC homozygous 47131122 17 52548572 52548573 G A 3 INTERGENIC homozygous 47131123 17 52548694 52548695 C CT 5 INTERGENIC homozygous 47131124 17 52549145 52549146 T C 13 INTERGENIC possibly homozygous 47131125 17 52549437 52549438 A G 25 INTERGENIC homozygous 47131126 17 52549629 52549630 A C 21 INTERGENIC homozygous 47131127 17 52549907 52549908 T G 9 INTERGENIC homozygous 47131128 17 52550928 52550929 C G 1 INTERGENIC homozygous 47131137 17 52550932 52550933 C G 6 INTERGENIC homozygous 47131138 17 52550990 52550991 G GTCTC 1 INTERGENIC homozygous 47131139 17 52551154 52551155 A G 15 INTERGENIC heterozygous 47131144 17 52551488 52551489 G A 16 INTERGENIC homozygous 47131145 17 52551852 52551853 T C 16 INTERGENIC possibly homozygous 47131146 17 52551896 52551897 G A 21 INTERGENIC homozygous 47131147 17 52552105 52552106 A G 17 INTERGENIC possibly homozygous 47131148 17 52552298 52552299 T C 12 INTERGENIC possibly homozygous 47131149 17 52552888 52552889 G - 11 INTERGENIC homozygous 47131150 17 52553032 52553033 A G 11 INTERGENIC heterozygous 47131151 17 52553208 52553209 A G 15 INTERGENIC possibly homozygous 47131152 17 52554065 52554066 A G 10 INTERGENIC homozygous 47131153 17 52554373 52554374 A AG 14 INTERGENIC possibly homozygous 47131155 17 52554410 52554411 T C 13 INTERGENIC possibly homozygous 47131156 17 52554544 52554545 C T 10 INTERGENIC heterozygous 47131157 17 52555400 52555401 G A 1 INTERGENIC homozygous 47131158 17 52558634 52558635 G C 15 INTERGENIC possibly homozygous 47131160 17 52558671 52558672 C T 14 INTERGENIC heterozygous 47429691 17 52559185 52559186 T C 18 INTERGENIC homozygous 47131161 17 52559433 52559436 TCC --- 4 INTERGENIC homozygous 47131162 17 52559502 52559503 A G 14 INTERGENIC homozygous 47131163 17 52560809 52560810 G A 20 INTERGENIC possibly homozygous 47131164 17 52561230 52561231 C A 16 INTERGENIC homozygous 47131165 17 52561461 52561462 A G 10 INTERGENIC homozygous 47131166 17 52561474 52561475 G GT 6 INTERGENIC homozygous 47131167 17 52561485 52561486 G C 8 INTERGENIC homozygous 47131168 17 52562305 52562306 C T 11 INTERGENIC heterozygous 47131170 17 52562567 52562568 C T 2 INTERGENIC homozygous 47131171 17 52563092 52563093 G C 9 INTERGENIC homozygous 47131172 17 52563465 52563466 G A 14 INTERGENIC possibly homozygous 47131173 17 52564389 52564390 G A 16 INTERGENIC possibly homozygous 47131174 17 52565579 52565580 T C 8 INTERGENIC homozygous 47131176 17 52565626 52565627 C T 12 INTERGENIC possibly homozygous 47131177 17 52565681 52565682 G C 18 INTERGENIC possibly homozygous 47131178 17 52568617 52568618 C T 9 INTERGENIC homozygous 47131179 17 52568677 52568678 T TGAA 8 INTERGENIC homozygous 47131180