chr	start	stop	reference nuc	variant nuc	depth	genic status	zygosity	variant ID
17	52295549	52295550	A	G	17	INTERGENIC	homozygous	47130773
17	52295911	52295912	A	G	20	INTERGENIC	homozygous	47591892
17	52296219	52296220	A	G	23	INTERGENIC	heterozygous	47591894
17	52297488	52297489	G	A	13	INTERGENIC	possibly homozygous	47591896
17	52298764	52298765	T	C	22	INTERGENIC	homozygous	47130776
17	52301043	52301044	A	G	31	GENIC	possibly homozygous	47429452
17	52301357	52301358	A	G	11	GENIC	homozygous	47591900
17	52301359	52301360	C	T	11	GENIC	homozygous	47591902
17	52301806	52301807	A	C	23	GENIC	possibly homozygous	47429454
17	52302314	52302315	C	T	19	GENIC	homozygous	47591904
17	52303877	52303878	C	G	29	GENIC	homozygous	47429460
17	52305718	52305719	G	A	7	INTERGENIC	homozygous	47591906
17	52305781	52305782	C	T	11	INTERGENIC	homozygous	47591909
17	52306148	52306149	C	CACA	8	INTERGENIC	possibly homozygous	47591911
17	52306345	52306346	G	T	14	INTERGENIC	homozygous	47591913
17	52306940	52306941	T	C	9	INTERGENIC	possibly homozygous	47591915
17	52307005	52307006	G	C	1	INTERGENIC	homozygous	47130783
17	52307008	52307009	A	C	1	INTERGENIC	homozygous	47130784
17	52307029	52307030	C	-	2	INTERGENIC	heterozygous	47130785
17	52307031	52307032	C	T	3	INTERGENIC	heterozygous	47709833
17	52307143	52307144	C	T	11	INTERGENIC	homozygous	47591916
17	52307225	52307226	C	CT	8	INTERGENIC	homozygous	47591918
17	52307335	52307429	CCTTTCCTCCCCCCTCCCTCTATCCTTCCCTCCTGTTTCTCTTCTTTTCTCCTTCCCTCTTCCCTTCTTCCTTCCTCCTTCCTTCTTCCCCCTC	----------------------------------------------------------------------------------------------	1	INTERGENIC	homozygous	47709835
17	52308345	52308346	G	A	20	INTERGENIC	homozygous	47591924
17	52308460	52308461	A	G	21	INTERGENIC	homozygous	47591926
17	52308492	52308493	T	C	17	INTERGENIC	homozygous	47429470
17	52308564	52308565	C	T	11	INTERGENIC	homozygous	47130788
17	52310316	52310317	A	G	11	INTERGENIC	possibly homozygous	47591928
17	52310439	52310440	T	C	11	INTERGENIC	possibly homozygous	47429477
17	52310853	52310854	G	A	19	INTERGENIC	homozygous	47591930
17	52312642	52312643	A	AG	5	INTERGENIC	heterozygous	47591932
17	52313673	52313674	C	A	20	INTERGENIC	homozygous	47130793
17	52315508	52315509	G	A	8	INTERGENIC	homozygous	47591934
17	52316393	52316394	T	-	14	INTERGENIC	homozygous	47130797
17	52317740	52317741	C	T	7	INTERGENIC	heterozygous	47429487
17	52317880	52317881	A	G	12	INTERGENIC	homozygous	47130799
17	52318651	52318652	G	A	20	INTERGENIC	homozygous	47591938
17	52319508	52319509	G	A	10	INTERGENIC	possibly homozygous	47591940
17	52319792	52319800	CTGTGTCT	--------	1	INTERGENIC	homozygous	47709837
17	52319989	52319990	G	C	20	INTERGENIC	homozygous	47429497
17	52320045	52320158	CTGTTAATCTTTTTTTTTTTTTCTTTTTTTTTTTGGAGCTGGGGACCGAACCCAGGGCCTTGCGCTTCCTAGGCAAGCGCTCTACCACTGAGCTAAATCCCCAACCCCCGGTA	-----------------------------------------------------------------------------------------------------------------	10	INTERGENIC	homozygous	47709839
17	52321173	52321174	C	T	20	INTERGENIC	homozygous	47130803
17	52321226	52321227	C	T	25	INTERGENIC	homozygous	47591942
17	52321367	52321368	C	T	5	INTERGENIC	heterozygous	47130804
17	52321394	52321395	T	C	6	INTERGENIC	heterozygous	47130807
17	52321543	52321544	G	A	21	INTERGENIC	homozygous	47429501
17	52321626	52321627	C	T	20	INTERGENIC	possibly homozygous	47429503
17	52322423	52322424	C	T	28	INTERGENIC	possibly homozygous	47591944
17	52322576	52322577	G	A	11	INTERGENIC	homozygous	47591946
17	52322640	52322641	G	T	13	INTERGENIC	homozygous	47591948
17	52322926	52322927	C	T	24	INTERGENIC	homozygous	47591950
17	52322990	52322991	C	G	17	INTERGENIC	possibly homozygous	47130813
17	52324010	52324011	C	T	19	INTERGENIC	homozygous	47591952
17	52324890	52324891	T	C	15	INTERGENIC	homozygous	47591954
17	52324923	52324924	C	T	19	INTERGENIC	homozygous	47591956
17	52326850	52326851	T	-	2	INTERGENIC	homozygous	47130819
17	52328597	52328598	C	T	16	INTERGENIC	homozygous	47591959
17	52329173	52329174	C	CT	5	INTERGENIC	heterozygous	47130821
17	52333883	52333884	C	G	18	INTERGENIC	homozygous	47130829
17	52335113	52335114	C	CT	7	INTERGENIC	homozygous	47429536
17	52342363	52342364	A	C	15	INTERGENIC	possibly homozygous	47591963
17	52342621	52342622	G	A	8	INTERGENIC	homozygous	47429544
17	52342626	52342627	A	T	8	INTERGENIC	homozygous	47591965
17	52342850	52342851	T	C	25	INTERGENIC	possibly homozygous	47130834
17	52343048	52343049	T	C	2	INTERGENIC	homozygous	47130835
17	52343058	52343059	T	C	2	INTERGENIC	homozygous	47130836
17	52344066	52344067	G	C	23	INTERGENIC	possibly homozygous	47591967
17	52344349	52344350	A	-	13	INTERGENIC	homozygous	47130841
17	52344725	52344726	C	T	11	INTERGENIC	homozygous	47591969
17	52346791	52346792	A	G	7	INTERGENIC	homozygous	47591971
17	52347747	52347748	C	T	14	INTERGENIC	homozygous	47591972
17	52347801	52347802	C	T	15	INTERGENIC	homozygous	47130845
17	52347824	52347825	G	A	25	INTERGENIC	homozygous	47130846
17	52349732	52349733	T	A	3	INTERGENIC	homozygous	47709841
17	52349733	52349734	G	A	3	INTERGENIC	homozygous	47709843
17	52353111	52353112	C	T	15	GENIC	possibly homozygous	47591976
17	52353235	52353236	C	T	3	GENIC	homozygous	47130847
17	52354926	52354927	T	C	22	GENIC	homozygous	47591978
17	52355616	52355617	T	C	3	GENIC	heterozygous	47130853
17	52358186	52358187	G	GT	16	GENIC	homozygous	47130856
17	52359496	52359497	T	C	1	GENIC	homozygous	47130858
17	52359778	52359779	T	C	17	GENIC	possibly homozygous	47130859
17	52361974	52361975	T	C	19	GENIC	homozygous	47591981
17	52362709	52362710	A	G	12	GENIC	homozygous	47130864
17	52362899	52362901	TT	--	1	GENIC	homozygous	47130865
17	52364004	52364005	T	C	33	GENIC	possibly homozygous	47130868
17	52364587	52364588	A	G	18	GENIC	homozygous	47591983
17	52368118	52368119	A	G	15	GENIC	homozygous	47429558
17	52368640	52368641	G	C	11	GENIC	homozygous	47130877
17	52368734	52368735	T	C	1	GENIC	homozygous	47709845
17	52368962	52368963	A	C	3	GENIC	homozygous	47591985
17	52369016	52369017	G	GAC	1	GENIC	homozygous	47130887
17	52369437	52369438	A	C	11	GENIC	possibly homozygous	47591987
17	52371835	52371836	T	G	11	GENIC	homozygous	47591989
17	52372599	52372600	G	A	9	GENIC	possibly homozygous	47591991
17	52378026	52378027	T	-	10	INTERGENIC	homozygous	47130912
17	52378230	52378231	T	C	2	INTERGENIC	homozygous	47591993
17	52378233	52378234	C	CA	2	INTERGENIC	homozygous	47591995
17	52379147	52379148	A	-	4	INTERGENIC	heterozygous	47429564
17	52379763	52379764	G	A	10	INTERGENIC	possibly homozygous	47130915
17	52379858	52379859	T	C	9	INTERGENIC	homozygous	47130916
17	52381098	52381099	T	C	31	INTERGENIC	possibly homozygous	47591997
17	52381359	52381360	C	A	12	INTERGENIC	homozygous	47130917
17	52382459	52382460	C	T	2	INTERGENIC	homozygous	47592001
17	52383096	52383097	T	C	24	INTERGENIC	possibly homozygous	47130926
17	52383581	52383582	A	C	30	INTERGENIC	possibly homozygous	47130927
17	52385201	52385202	C	T	8	INTERGENIC	homozygous	47592003
17	52385299	52385300	G	GCTCCAGTTAGCACTTACAGAATCCCCAC	2	INTERGENIC	homozygous	47709847
17	52385812	52385813	A	AACAC	9	INTERGENIC	heterozygous	47130931
17	52386383	52386384	A	G	10	INTERGENIC	heterozygous	47592005
17	52386984	52386985	C	T	14	INTERGENIC	possibly homozygous	47592009
17	52387151	52387154	AAC	---	8	INTERGENIC	homozygous	47130937
17	52387321	52387322	G	A	13	INTERGENIC	homozygous	47130938
17	52387737	52387739	TT	--	2	INTERGENIC	homozygous	47130939
17	52388222	52388223	C	T	32	INTERGENIC	heterozygous	47130941
17	52388287	52388288	G	A	32	INTERGENIC	homozygous	47592011
17	52388589	52388590	T	TA	1	INTERGENIC	homozygous	47130943
17	52388643	52388644	G	GA	1	INTERGENIC	homozygous	47130944
17	52388693	52388694	G	A	3	INTERGENIC	homozygous	47592013
17	52388936	52388952	AAACAAACAAACAAAC	----------------	4	INTERGENIC	homozygous	47709849
17	52388998	52388999	T	C	19	INTERGENIC	homozygous	47130946
17	52390253	52390254	T	A	15	INTERGENIC	homozygous	47130948
17	52391729	52391730	A	C	27	INTERGENIC	possibly homozygous	47592015
17	52391776	52391777	G	C	12	INTERGENIC	heterozygous	47130953
17	52392054	52392055	G	C	17	INTERGENIC	possibly homozygous	47130954
17	52392217	52392218	G	A	16	INTERGENIC	homozygous	47130955
17	52392320	52392321	T	G	7	INTERGENIC	homozygous	47592017
17	52392492	52392493	A	AT	1	INTERGENIC	homozygous	47592019
17	52392779	52392780	G	A	28	INTERGENIC	possibly homozygous	47592021
17	52393472	52393473	A	G	17	INTERGENIC	homozygous	47592023
17	52393501	52393502	T	C	8	INTERGENIC	homozygous	47592025
17	52393687	52393688	G	T	28	INTERGENIC	possibly homozygous	47592027
17	52393797	52393798	A	G	24	INTERGENIC	possibly homozygous	47130957
17	52394052	52394058	AAGAGC	------	4	INTERGENIC	homozygous	47130958
17	52394328	52394341	CAGCCTTGTGTGT	-------------	2	INTERGENIC	homozygous	47130960
17	52394466	52394467	G	A	15	INTERGENIC	possibly homozygous	47130961
17	52394479	52394480	G	A	11	INTERGENIC	possibly homozygous	47592029
17	52395758	52395759	G	C	12	INTERGENIC	heterozygous	47130965
17	52395795	52395796	A	T	13	INTERGENIC	possibly homozygous	47592031
17	52395924	52395925	T	C	21	INTERGENIC	possibly homozygous	47130966
17	52396299	52396300	C	T	13	INTERGENIC	homozygous	47592033
17	52396606	52396607	T	C	30	INTERGENIC	homozygous	47130967
17	52396808	52396809	T	A	26	INTERGENIC	homozygous	47130968
17	52397269	52397270	C	CTTGGTCTGTG	2	INTERGENIC	homozygous	47130969
17	52397322	52397323	G	A	6	INTERGENIC	homozygous	47130970
17	52397533	52397534	C	T	6	INTERGENIC	homozygous	47592035
17	52397535	52397536	T	C	5	INTERGENIC	homozygous	47130971
17	52397733	52397734	C	G	19	INTERGENIC	possibly homozygous	47130972
17	52398373	52398374	T	C	18	INTERGENIC	possibly homozygous	47130976
17	52400871	52400872	A	G	1	INTERGENIC	homozygous	47130983
17	52401342	52401343	T	C	14	INTERGENIC	heterozygous	47130987
17	52401443	52401444	A	G	3	INTERGENIC	homozygous	47130988
17	52401459	52401460	G	GTT	1	INTERGENIC	homozygous	47592037
17	52403715	52403716	C	A	9	INTERGENIC	possibly homozygous	47130998
17	52404062	52404063	T	C	17	INTERGENIC	homozygous	47592039
17	52405413	52405414	G	T	20	INTERGENIC	possibly homozygous	47131002
17	52407342	52407343	G	A	18	INTERGENIC	homozygous	47592041
17	52409083	52409084	T	G	18	INTERGENIC	homozygous	47131011
17	52410261	52410262	C	-	20	INTERGENIC	heterozygous	47709851
17	52410721	52410746	GAGAGAGAGAGAGAGAGAGAGAGAG	-------------------------	1	INTERGENIC	homozygous	47709853
17	52410748	52410749	A	C	1	INTERGENIC	homozygous	47131015
17	52410764	52410765	T	C	12	INTERGENIC	homozygous	47131017
17	52411845	52411846	G	A	21	INTERGENIC	possibly homozygous	47592043
17	52412664	52412665	T	C	16	INTERGENIC	homozygous	47131019
17	52413234	52413235	C	-	10	INTERGENIC	possibly homozygous	47429591
17	52413719	52413720	T	C	11	INTERGENIC	homozygous	47131022
17	52414180	52414181	T	C	8	INTERGENIC	homozygous	47131024
17	52414323	52414324	G	C	20	INTERGENIC	homozygous	47131025
17	52414633	52414634	G	A	13	INTERGENIC	homozygous	47592045
17	52417982	52417983	G	T	18	INTERGENIC	possibly homozygous	47131027
17	52420360	52420361	C	CAGATAGCACAATTGCTGGGCTCTTATCAGCT	1	INTERGENIC	homozygous	47709855
17	52421149	52421150	T	G	8	INTERGENIC	possibly homozygous	47131030
17	52421564	52421565	C	G	10	INTERGENIC	homozygous	47131031
17	52421974	52421975	A	-	6	INTERGENIC	homozygous	47131033
17	52422810	52422811	G	GA	22	INTERGENIC	possibly homozygous	47131036
17	52424721	52424722	T	C	19	INTERGENIC	possibly homozygous	47131038
17	52426803	52426804	A	G	2	INTERGENIC	homozygous	47131041
17	52427260	52427261	T	C	10	INTERGENIC	homozygous	47131046
17	52428440	52428441	T	C	23	INTERGENIC	possibly homozygous	47131048
17	52429445	52429446	G	A	15	INTERGENIC	homozygous	47131051
17	52432024	52432025	G	A	19	INTERGENIC	homozygous	47592049
17	52432129	52432130	A	G	11	INTERGENIC	homozygous	47131055
17	52432339	52432340	G	A	6	INTERGENIC	heterozygous	47592051
17	52432368	52432369	T	C	1	INTERGENIC	homozygous	47131058
17	52435006	52435007	G	GCACACACA	1	INTERGENIC	homozygous	47709857
17	52435722	52435724	AA	--	7	INTERGENIC	homozygous	47131061
17	52435988	52435989	T	G	16	INTERGENIC	homozygous	47131062
17	52436812	52436813	A	G	23	INTERGENIC	homozygous	47131064
17	52437153	52437154	G	A	17	INTERGENIC	homozygous	47592053
17	52437228	52437229	A	G	13	INTERGENIC	homozygous	47131065
17	52437672	52437673	A	-	1	INTERGENIC	homozygous	47131068
17	52437774	52437775	G	T	18	INTERGENIC	homozygous	47592055
17	52438097	52438100	GTA	---	13	INTERGENIC	homozygous	47131071
17	52438104	52438105	T	C	18	INTERGENIC	homozygous	47131072
17	52438171	52438172	T	G	19	INTERGENIC	homozygous	47592057
17	52438628	52438629	G	A	23	INTERGENIC	heterozygous	47131074
17	52440383	52440384	A	G	23	INTERGENIC	possibly homozygous	47592059
17	52442015	52442016	A	-	2	INTERGENIC	homozygous	47131075
17	52443383	52443384	A	C	15	INTERGENIC	possibly homozygous	47592061
17	52443832	52443833	A	G	19	INTERGENIC	possibly homozygous	47592063
17	52443918	52443919	C	A	13	INTERGENIC	heterozygous	47592065
17	52446983	52446984	A	G	12	INTERGENIC	heterozygous	47131082
17	52447098	52447099	A	G	9	INTERGENIC	heterozygous	47131083
17	52447624	52447625	A	T	24	INTERGENIC	possibly homozygous	47131084
17	52447888	52447889	G	A	11	INTERGENIC	homozygous	47131085
17	52450036	52450037	A	G	22	INTERGENIC	possibly homozygous	47131086
17	52443919	52443920	C	A	13	INTERGENIC	heterozygous	47592067
17	52449849	52449850	A	C	16	INTERGENIC	homozygous	47592069
17	52450880	52450881	T	TG	7	INTERGENIC	homozygous	47592073
17	52451067	52451068	T	G	14	INTERGENIC	homozygous	47131088
17	52475280	52475281	T	TGC	9	INTERGENIC	heterozygous	47592079
17	52506345	52506346	C	T	2	INTERGENIC	homozygous	47429625
17	52506357	52506358	G	A	3	INTERGENIC	homozygous	47429627
17	52506393	52506394	A	T	10	INTERGENIC	possibly homozygous	47429629
17	52506435	52506436	T	C	6	INTERGENIC	homozygous	47429631
17	52506445	52506446	T	TG	7	INTERGENIC	homozygous	47429633
17	52506503	52506504	G	A	7	INTERGENIC	homozygous	47429635
17	52506516	52506522	TACATT	------	2	INTERGENIC	homozygous	47429637
17	52520224	52520225	G	T	1	INTERGENIC	homozygous	47131103
17	52532616	52532617	T	TA	4	INTERGENIC	homozygous	47131105
17	52543574	52543575	A	G	12	INTERGENIC	homozygous	47131106
17	52543773	52543774	A	G	8	INTERGENIC	possibly homozygous	47131107
17	52544646	52544647	A	T	20	INTERGENIC	homozygous	47131108
17	52544738	52544739	C	G	1	INTERGENIC	homozygous	47131109
17	52544740	52544741	G	-	1	INTERGENIC	homozygous	47131110
17	52544751	52544752	C	-	4	INTERGENIC	homozygous	47131112
17	52545215	52545216	C	CA	11	INTERGENIC	homozygous	47131113
17	52545274	52545275	G	A	12	INTERGENIC	heterozygous	47131114
17	52545890	52545891	T	TAC	6	INTERGENIC	heterozygous	47592081
17	52546744	52546745	C	T	25	INTERGENIC	possibly homozygous	47131116
17	52547176	52547177	A	G	11	INTERGENIC	heterozygous	47131117
17	52547216	52547217	A	AT	1	INTERGENIC	homozygous	47131118
17	52547500	52547501	G	A	11	INTERGENIC	homozygous	47592083
17	52547727	52547728	C	T	19	INTERGENIC	possibly homozygous	47131119
17	52548407	52548408	G	C	15	INTERGENIC	heterozygous	47131120
17	52548546	52548547	A	C	6	INTERGENIC	homozygous	47131121
17	52548547	52548548	G	C	6	INTERGENIC	homozygous	47131122
17	52549280	52549281	T	A	17	INTERGENIC	homozygous	47592085
17	52548572	52548573	G	A	12	INTERGENIC	homozygous	47131123
17	52548694	52548695	C	CT	12	INTERGENIC	heterozygous	47131124
17	52549145	52549146	T	C	20	INTERGENIC	homozygous	47131125
17	52549437	52549438	A	G	23	INTERGENIC	homozygous	47131126
17	52549629	52549630	A	C	24	INTERGENIC	homozygous	47131127
17	52549907	52549908	T	G	25	INTERGENIC	homozygous	47131128
17	52550879	52550880	T	C	1	INTERGENIC	homozygous	47131135
17	52550928	52550929	C	G	5	INTERGENIC	heterozygous	47131137
17	52550990	52550991	G	GTCTC	1	INTERGENIC	homozygous	47131139
17	52551095	52551096	T	C	4	INTERGENIC	homozygous	47131143
17	52551488	52551489	G	A	20	INTERGENIC	homozygous	47131145
17	52551852	52551853	T	C	26	INTERGENIC	possibly homozygous	47131146
17	52552105	52552106	A	G	19	INTERGENIC	homozygous	47131148
17	52552298	52552299	T	C	19	INTERGENIC	possibly homozygous	47131149
17	52552888	52552889	G	-	9	INTERGENIC	homozygous	47131150
17	52553032	52553033	A	G	20	INTERGENIC	homozygous	47131151
17	52553208	52553209	A	G	17	INTERGENIC	possibly homozygous	47131152
17	52554065	52554066	A	G	18	INTERGENIC	possibly homozygous	47131153
17	52554373	52554374	A	AG	14	INTERGENIC	homozygous	47131155
17	52554410	52554411	T	C	21	INTERGENIC	homozygous	47131156
17	52555400	52555401	G	A	2	INTERGENIC	homozygous	47131158
17	52555406	52555407	A	G	3	INTERGENIC	homozygous	47131159
17	52558634	52558635	G	C	23	INTERGENIC	possibly homozygous	47131160
17	52559185	52559186	T	C	12	INTERGENIC	homozygous	47131161
17	52559433	52559436	TCC	---	4	INTERGENIC	homozygous	47131162
17	52559502	52559503	A	G	15	INTERGENIC	possibly homozygous	47131163
17	52561474	52561475	G	GT	10	INTERGENIC	homozygous	47131167
17	52562567	52562568	C	T	13	INTERGENIC	homozygous	47131171
17	52565282	52565285	TCG	---	11	INTERGENIC	homozygous	47429699
17	52564200	52564201	A	G	15	INTERGENIC	homozygous	47592087
17	52564389	52564390	G	A	21	INTERGENIC	possibly homozygous	47131174
17	52564776	52564777	A	-	20	INTERGENIC	homozygous	47429697
17	52565285	52565286	T	A	11	INTERGENIC	homozygous	47709859
17	52565356	52565357	T	C	29	INTERGENIC	possibly homozygous	47429701
17	52565626	52565627	C	T	19	INTERGENIC	homozygous	47131177
17	52565915	52565916	C	T	30	INTERGENIC	possibly homozygous	47429704
17	52568644	52568645	C	T	12	INTERGENIC	possibly homozygous	47429706
17	52568677	52568678	T	TGAA	4	INTERGENIC	heterozygous	47131180