chr start stop reference nuc variant nuc depth genic status zygosity variant ID 13 110927617 110927619 GT -- 4 GENIC heterozygous 50566814 13 110931740 110931741 A AGAGAGAGAGGGAGAGAGGGAGAGAGGGAGAGAGAGAGGGGGGAGAGG 10 GENIC homozygous 50536204 13 110932145 110932147 GT -- 7 GENIC heterozygous 50566815 13 110945180 110945181 T TACACACACACAC 9 GENIC heterozygous 50499019 13 110946212 110946214 TG -- 3 GENIC heterozygous 50566816 13 110945181 110945183 AC -- 9 GENIC heterozygous 50554705 13 110959796 110959797 T TA 12 GENIC heterozygous 49875800 13 110960402 110960406 ACAC ---- 4 GENIC heterozygous 50554709 13 110960404 110960406 AC -- 4 GENIC heterozygous 50554710 13 110962391 110962393 TC -- 6 GENIC heterozygous 50554714 13 110962615 110962650 ACACTGTGTGTTTGTGACTCTGTGTGTGTATGACT ----------------------------------- 3 GENIC heterozygous 50554716 13 110967229 110967230 C CCACA 8 GENIC homozygous 49991160 13 110969049 110969050 G GTCTATCTATCTA 6 GENIC heterozygous 50536208 13 110985076 110985078 AC -- 8 GENIC heterozygous 50536214 13 110987271 110987273 TC -- 11 GENIC heterozygous 50536216 13 110989581 110989582 C CA 2 GENIC heterozygous 50554723 13 110990580 110990581 A G 29 GENIC homozygous 49875817 13 110992769 110992770 G GGTGT 1 GENIC homozygous 49991264 13 110996148 110996149 G GGT 6 GENIC heterozygous 50536222 13 110996149 110996151 GT -- 6 GENIC heterozygous 50554724 13 111001127 111001128 C CA 1 GENIC homozygous 50536224 13 111004645 111004646 A - 13 GENIC homozygous 49875819 13 111011795 111011800 CTCTG ----- 28 GENIC heterozygous 50603677 13 111013527 111013528 C CACACACACACACACACACAGACACAAACACACATACACACACACACACCCATTGCTTCCACACACACACAGACACACACACACACACAGACATACACACACACAGACACAA 21 GENIC heterozygous 50554726 13 111013527 111013528 C CACACACACACACACACACACAGACACAAACACACATACACACACACACACCCATTGCTTCCACACACACACAGACACACACACACACACAGACATACACACACACAGACACAA 21 GENIC heterozygous 50536231 13 111015887 111015888 A G 19 GENIC homozygous 49875824 13 111020933 111020937 TGTG ---- 4 GENIC homozygous 49875825 13 111023638 111023640 GT -- 12 GENIC heterozygous 50554728 13 111043586 111043587 A ACCCTCCTCCCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCAACTGTGT 13 GENIC possibly homozygous 50536237 13 111055239 111055240 C CT 8 GENIC heterozygous 50566819 13 111055240 111055241 T - 8 GENIC heterozygous 49991423 13 111073679 111073683 TGTG ---- 4 GENIC heterozygous 50376328 13 111077759 111077760 G GCTA 18 GENIC homozygous 50536239 13 111077762 111077763 T TGGCTA 17 GENIC homozygous 50536241 13 111077765 111077772 AGGGAGA ------- 16 GENIC homozygous 50536243 13 111077778 111077779 G A 16 GENIC homozygous 50536245 13 111077780 111077781 G A 17 GENIC homozygous 50536247 13 111077782 111077794 GTGTCTCTTTTC ------------ 26 GENIC homozygous 50536248 13 111077793 111077794 C CAAAAAAAAAAAA 6 GENIC heterozygous 50554736 13 111077793 111077794 C CAAAAAAAAAAA 6 GENIC heterozygous 50536250 13 111077815 111077816 C G 17 GENIC homozygous 50536252 13 111077846 111077847 C A 18 GENIC homozygous 50160703 13 111077854 111077855 C A 18 GENIC homozygous 50160705 13 111077857 111077858 A - 18 GENIC homozygous 50536254 13 111077859 111077860 A AT 19 GENIC homozygous 50536256 13 111077862 111077863 T TA 20 GENIC homozygous 49875845 13 111077866 111077867 A C 20 GENIC homozygous 49991461 13 111077881 111077882 T A 19 GENIC homozygous 49991462 13 111077890 111077894 CTCT ---- 21 GENIC homozygous 50536258 13 111077893 111077894 T TGGGA 19 GENIC homozygous 50536260 13 111077902 111077903 C G 21 GENIC homozygous 49991463 13 111077925 111077926 A G 18 GENIC homozygous 50536262 13 111077926 111077927 T A 20 GENIC homozygous 50536264 13 111077934 111077935 T G 19 GENIC homozygous 49875846 13 111077939 111077940 C T 15 GENIC homozygous 49875847 13 111077942 111077943 T A 16 GENIC homozygous 49875848 13 111077944 111077945 T G 17 GENIC homozygous 49875849 13 111077947 111077948 C G 16 GENIC homozygous 49875850 13 111078165 111078167 AT -- 3 GENIC homozygous 50587328 13 111080486 111080487 C T 35 GENIC homozygous 49875863 13 111099409 111099413 TTAA ---- 10 GENIC homozygous 50160782 13 111102550 111102551 T C 29 GENIC homozygous 49991541 13 111103966 111103967 A - 8 GENIC possibly homozygous 50160820 13 111105316 111105317 T TAC 7 GENIC heterozygous 50607510 13 111110719 111110721 AT -- 6 GENIC homozygous 50603678 13 111111650 111111651 C CTCTT 9 GENIC heterozygous 50984191 13 111113032 111113033 T G 31 GENIC possibly homozygous 50376379 13 111113521 111113522 G A 17 GENIC homozygous 49991565 13 111114883 111114889 GTGTGT ------ 7 GENIC heterozygous 50816265 13 111114885 111114889 GTGT ---- 7 GENIC possibly homozygous 50566820 13 111117026 111117027 T TGG 2 GENIC homozygous 50895047 13 111117937 111117938 C T 24 GENIC homozygous 50376383 13 111119256 111119257 T C 26 GENIC possibly homozygous 49991572 13 111119498 111119499 A C 22 GENIC homozygous 49991573 13 111119590 111119591 A - 17 GENIC possibly homozygous 49991574 13 111119747 111119748 T - 20 GENIC possibly homozygous 50160848 13 111119772 111119773 C T 23 GENIC homozygous 49991575 13 111119990 111119991 C G 20 GENIC possibly homozygous 49991576 13 111120015 111120016 T C 24 GENIC possibly homozygous 49991577 13 111120046 111120047 C T 24 GENIC possibly homozygous 49991578 13 111120089 111120090 G A 17 GENIC possibly homozygous 49991579 13 111121035 111121041 AAAAAA ------ 11 GENIC possibly homozygous 49991581 13 111121205 111121206 G A 28 GENIC possibly homozygous 49991582 13 111121449 111121450 G A 24 GENIC possibly homozygous 49991583 13 111121840 111121841 T C 13 GENIC homozygous 49991584 13 111122878 111122879 T C 23 GENIC possibly homozygous 49991585 13 111123774 111123775 T C 28 GENIC possibly homozygous 49991586 13 111124801 111124802 G A 19 GENIC possibly homozygous 49991588 13 111126855 111126856 C CT 12 GENIC heterozygous 49991589 13 111126955 111126956 T TC 12 GENIC homozygous 49991591 13 111127907 111127908 C G 33 GENIC possibly homozygous 49991592 13 111128387 111128388 C T 17 GENIC possibly homozygous 49991593 13 111128575 111128576 T C 28 GENIC possibly homozygous 49991594 13 111128893 111128894 A G 29 GENIC possibly homozygous 49991595 13 111129655 111129656 G A 30 GENIC homozygous 50376389 13 111129908 111129909 G C 21 GENIC possibly homozygous 49991596 13 111095802 111095803 A ATGTG 14 GENIC possibly homozygous 51205406 13 111113483 111113484 G C 22 GENIC homozygous 51205407 13 111114742 111114743 T - 33 GENIC possibly homozygous 51205408 13 111123717 111123718 G A 29 GENIC possibly homozygous 51205409 13 111130744 111130745 A AGCT 16 GENIC homozygous 51205411 13 111132386 111132387 T G 31 GENIC possibly homozygous 49991599 13 111132603 111132604 A G 28 GENIC possibly homozygous 49991600 13 111132857 111132858 C T 31 GENIC homozygous 49991602 13 111133516 111133517 T A 30 GENIC homozygous 49991603 13 111133938 111133939 C G 23 GENIC homozygous 49991604 13 111134107 111134108 A G 27 GENIC homozygous 49991605 13 111134327 111134328 T C 20 GENIC homozygous 49991606 13 111134842 111134845 AGG --- 20 GENIC homozygous 51205412 13 111135267 111135268 T C 42 GENIC possibly homozygous 49991607 13 111135750 111135751 C CTAGCTAAGGGGACTTACTGAGATGTCTAAAGTTGAAAACAAGGGAAGAGCAGAAGCCATGGTGCTGCTGTCAATCCCA 10 GENIC homozygous 50536276 13 111136881 111136882 T TG 26 GENIC possibly homozygous 49991609 13 111137027 111137028 T - 11 GENIC homozygous 49875874 13 111138018 111138019 A G 16 GENIC homozygous 51205413 13 111138235 111138236 T C 23 GENIC possibly homozygous 49991610 13 111138339 111138340 G A 26 GENIC homozygous 49991611 13 111138779 111138780 C T 27 GENIC homozygous 49991612 13 111138937 111138938 C T 32 GENIC possibly homozygous 49991613 13 111138978 111138979 C T 33 GENIC possibly homozygous 51205414 13 111139031 111139032 C T 33 GENIC homozygous 49991614 13 111139101 111139102 G A 41 GENIC possibly homozygous 51205415 13 111139163 111139164 G C 41 GENIC possibly homozygous 49991615 13 111139457 111139458 G A 28 GENIC possibly homozygous 51205416 13 111139504 111139505 T C 23 GENIC possibly homozygous 49991616 13 111140307 111140308 G A 20 GENIC possibly homozygous 51205417 13 111140538 111140539 C G 12 GENIC homozygous 49991619 13 111140616 111140617 C T 24 GENIC possibly homozygous 51205418 13 111142317 111142318 C T 28 GENIC homozygous 49991620 13 111145218 111145219 G A 36 GENIC possibly homozygous 51205419 13 111146312 111146313 T C 27 GENIC homozygous 50160914 13 111146794 111146795 G - 29 GENIC possibly homozygous 51205420 13 111148604 111148605 T C 25 GENIC possibly homozygous 49991621 13 111148937 111148938 T - 24 GENIC possibly homozygous 49875875 13 111149048 111149049 C T 21 GENIC homozygous 49991622 13 111149254 111149255 T TG 36 GENIC possibly homozygous 49991624 13 111150254 111150255 A ATGTCTGTC 15 GENIC homozygous 49991631 13 111149603 111149604 T TTGTGTGTGTGTGTGTGTG 17 GENIC possibly homozygous 51205421 13 111149653 111149655 TG -- 22 GENIC homozygous 50620860 13 111149805 111149809 TCTG ---- 23 GENIC homozygous 49991625 13 111150005 111150031 ACACACACATATATATATATATATAT -------------------------- 3 GENIC heterozygous 50816271 13 111150124 111150128 GTAT ---- 2 GENIC homozygous 50783504 13 111131860 111131861 G T 25 GENIC possibly homozygous 50839478 13 111150487 111150488 T - 28 GENIC homozygous 49991633 13 111150924 111150925 T C 33 GENIC possibly homozygous 49991634 13 111150938 111150939 T C 33 GENIC possibly homozygous 49991635 13 111151215 111151216 A C 31 GENIC possibly homozygous 51205422 13 111151232 111151233 G T 30 GENIC possibly homozygous 49991636 13 111151251 111151252 A G 31 GENIC possibly homozygous 50376405 13 111151315 111151316 T C 17 GENIC possibly homozygous 51205423 13 111151370 111151371 G - 18 GENIC possibly homozygous 51205424 13 111151953 111151954 A G 24 GENIC possibly homozygous 49991638 13 111152079 111152080 C T 31 GENIC possibly homozygous 49991639 13 111152868 111152869 C T 26 GENIC homozygous 51205425 13 111152874 111152875 T TAC 14 GENIC heterozygous 49991641 13 111152875 111152877 AC -- 14 GENIC heterozygous 50536280 13 111152993 111152994 C T 34 GENIC possibly homozygous 51205426 13 111153045 111153046 T A 29 GENIC homozygous 51205427 13 111153184 111153185 C T 24 GENIC possibly homozygous 51205428 13 111153279 111153280 C T 28 GENIC possibly homozygous 49991643 13 111154089 111154090 G A 37 GENIC possibly homozygous 51205429 13 111155175 111155183 CTCTATCT -------- 21 GENIC homozygous 51205432 13 111154535 111154536 A C 30 GENIC possibly homozygous 49991645 13 111154662 111154663 A C 20 GENIC homozygous 49991646 13 111155050 111155062 ACACACACACAC ------------ 5 GENIC heterozygous 51205430 13 111155099 111155103 CACG ---- 3 GENIC homozygous 51205431 13 111151782 111151783 C T 32 GENIC homozygous 50730766 13 111156218 111156219 A C 22 GENIC homozygous 49991650 13 111156815 111156816 T C 26 GENIC homozygous 49991652 13 111158282 111158283 A G 27 GENIC homozygous 49991654 13 111158682 111158683 A G 26 GENIC possibly homozygous 49991656 13 111158892 111158893 T A 30 GENIC possibly homozygous 49991657 13 111159569 111159570 T C 22 GENIC homozygous 51205433 13 111159782 111159784 AA -- 9 GENIC heterozygous 50160940 13 111159783 111159784 A - 9 GENIC possibly homozygous 49991662 13 111159817 111159818 A ACACACACACACACACACACACG 10 GENIC heterozygous 50499116 13 111159827 111159828 A ACACACACACACACAC 11 GENIC heterozygous 50816277 13 111159896 111159897 C A 24 GENIC homozygous 49991663 13 111159969 111159970 T C 22 GENIC homozygous 49991664 13 111162203 111162204 A G 46 GENIC homozygous 49991668 13 111163327 111163328 T TTTATTA 2 GENIC homozygous 50895049 13 111164733 111164734 T G 20 GENIC homozygous 51205434 13 111164843 111164844 A AG 19 GENIC possibly homozygous 49991680 13 111164845 111164846 A AT 19 GENIC possibly homozygous 49991681 13 111164925 111164926 A G 14 GENIC homozygous 49991682 13 111165060 111165061 A C 22 GENIC possibly homozygous 49991683 13 111165418 111165419 T C 30 GENIC possibly homozygous 49991684 13 111166304 111166305 T C 26 GENIC possibly homozygous 49991686 13 111166900 111166901 T - 24 GENIC homozygous 49991687 13 111167513 111167514 G GCACACACACACACA 4 GENIC heterozygous 50587330 13 111167767 111167768 A G 45 GENIC possibly homozygous 49991689 13 111169687 111169688 T C 24 GENIC possibly homozygous 49991700 13 111169748 111169755 CCTTGTA ------- 28 GENIC possibly homozygous 51205435 13 111169763 111169764 G T 32 GENIC possibly homozygous 49991701 13 111169765 111169766 C T 32 GENIC possibly homozygous 51205436 13 111170952 111170953 A G 29 GENIC possibly homozygous 50160961 13 111170996 111170997 A G 27 GENIC homozygous 49991702 13 111171023 111171024 T C 26 GENIC possibly homozygous 49991703 13 111171064 111171065 T C 32 GENIC possibly homozygous 49991704 13 111171294 111171295 A G 24 GENIC homozygous 50376472 13 111171472 111171473 C - 16 GENIC possibly homozygous 49991705 13 111171880 111171881 T C 30 GENIC possibly homozygous 49991706 13 111171933 111171934 A G 34 GENIC possibly homozygous 49991707 13 111172185 111172186 C T 21 GENIC homozygous 51205437 13 111172278 111172279 T C 26 GENIC homozygous 49991708 13 111172424 111172425 A G 14 GENIC homozygous 51205438 13 111174552 111174553 T C 25 GENIC possibly homozygous 51205439 13 111174912 111174913 C T 24 GENIC homozygous 49991709 13 111175248 111175249 C T 21 GENIC homozygous 51205440 13 111175527 111175528 T TGTGTGCACGAGC 7 GENIC homozygous 51205441 13 111175556 111175557 C T 9 GENIC possibly homozygous 51205442 13 111175658 111175659 A - 16 GENIC homozygous 50376474 13 111176291 111176292 G A 29 GENIC homozygous 49991710 13 111177896 111177897 A AGGCGGGC 4 GENIC heterozygous 50895052 13 111178113 111178114 G A 13 GENIC homozygous 51205443 13 111178458 111178459 A G 28 GENIC homozygous 50160975 13 111179540 111179541 G A 27 GENIC possibly homozygous 50160977 13 111182205 111182213 TCTGTCTG -------- 3 GENIC homozygous 51205444 13 111183874 111183875 T C 23 GENIC homozygous 50160989 13 111184499 111184500 C A 28 GENIC possibly homozygous 51205445 13 111184734 111184735 A ATATATG 9 GENIC heterozygous 51205446 13 111184761 111184769 TATGTGTG -------- 5 GENIC heterozygous 51205447 13 111185653 111185654 G A 20 GENIC possibly homozygous 50160995 13 111186183 111186194 CCTCCTCCACT ----------- 18 GENIC possibly homozygous 50160997 13 111186293 111186294 C T 21 GENIC homozygous 51205448 13 111186563 111186564 A G 26 GENIC possibly homozygous 50160999 13 111187090 111187091 C T 12 GENIC homozygous 50499124 13 111187780 111187781 C T 32 GENIC possibly homozygous 51205449 13 111187826 111187827 C CT 21 GENIC possibly homozygous 50161003 13 111188568 111188569 A T 23 GENIC homozygous 49875876 13 111188630 111188631 A AGAGG 20 GENIC possibly homozygous 49991718 13 111188631 111188632 T TTTGC 20 GENIC possibly homozygous 49991719 13 111189110 111189116 TATATG ------ 12 GENIC homozygous 50713920 13 111189157 111189158 G GGT 5 GENIC homozygous 49991722 13 111189210 111189211 G GTGGA 10 GENIC homozygous 49991723 13 111189547 111189549 CC -- 12 GENIC possibly homozygous 50599621 13 111190319 111190320 T A 37 GENIC homozygous 51205450 13 111193349 111193350 G C 20 GENIC homozygous 50161031 13 111194509 111194510 T C 18 GENIC homozygous 50161037 13 111194777 111194778 G GCACA 12 GENIC homozygous 50161041 13 111195748 111195749 C CTGTGTGTGTG 7 GENIC homozygous 50613437 13 111196976 111196978 TG -- 30 GENIC possibly homozygous 51205451 13 111198777 111198789 TTCTCTTCTTTT ------------ 17 GENIC homozygous 51205452 13 111199369 111199370 T C 20 GENIC homozygous 49991728 13 111200518 111200519 A AGTGT 20 GENIC possibly homozygous 50161059 13 111200700 111200701 C CAT 33 GENIC homozygous 51205453 13 111200701 111200702 G GTGTGTGTGCA 33 GENIC homozygous 51205454 13 111201222 111201223 T C 27 GENIC possibly homozygous 49991732 13 111201738 111201739 T TTGTGTGTGTG 7 GENIC heterozygous 50536285 13 111203137 111203138 G A 32 GENIC homozygous 51205455 13 111204407 111204408 T - 18 GENIC homozygous 51205456 13 111206465 111206469 GAAA ---- 19 GENIC homozygous 51205457 13 111206577 111206578 T C 27 GENIC possibly homozygous 49991734 13 111207317 111207318 A G 27 GENIC homozygous 49991735 13 111207738 111207739 C CT 2 GENIC heterozygous 50554745 13 111208241 111208242 C T 33 GENIC homozygous 50161105 13 111208623 111208626 TGC --- 41 GENIC possibly homozygous 50599623 13 111208626 111208627 T TAA 42 GENIC possibly homozygous 50599625 13 111210366 111210367 G GATAA 18 GENIC possibly homozygous 50161114 13 111212423 111212427 GAAA ---- 10 GENIC homozygous 49991739 13 111213649 111213650 G GCC 13 GENIC heterozygous 49991742 13 111214231 111214232 A - 15 GENIC homozygous 50161134 13 111214242 111214243 C T 16 GENIC homozygous 50161136 13 111214524 111214525 G GAAA 4 GENIC homozygous 50816285 13 111214525 111214526 G GAAAGAAAGA 3 GENIC homozygous 50816287 13 111214585 111214586 G GCA 1 GENIC homozygous 49991750 13 111220252 111220253 A G 13 GENIC homozygous 51205458 13 111221192 111221193 T A 26 GENIC possibly homozygous 50783506 13 111221429 111221431 TA -- 7 GENIC heterozygous 51083063 13 111221591 111221593 TG -- 4 GENIC heterozygous 50536297 13 111222092 111222093 T C 31 GENIC possibly homozygous 49991759 13 111222859 111222860 C A 36 GENIC possibly homozygous 51205459 13 111224267 111224268 T C 23 GENIC possibly homozygous 49991761 13 111225314 111225318 CACA ---- 2 GENIC homozygous 50161253 13 111226384 111226385 T C 33 GENIC homozygous 50376532 13 111226423 111226424 A - 30 GENIC possibly homozygous 49991762 13 111228149 111228150 C T 27 GENIC possibly homozygous 50376540 13 111226625 111226626 T C 30 GENIC homozygous 50161257 13 111226788 111226789 C T 27 GENIC possibly homozygous 50376534 13 111227777 111227778 T C 28 GENIC possibly homozygous 50376536 13 111227950 111227951 T TC 28 GENIC homozygous 50376538 13 111219966 111219967 A AACAC 6 GENIC heterozygous 50659334 13 111228572 111228573 A G 22 GENIC possibly homozygous 50161259 13 111228675 111228676 C A 25 GENIC homozygous 49991765 13 111228933 111228934 G A 37 GENIC possibly homozygous 50376544 13 111229113 111229114 T C 27 GENIC possibly homozygous 50376546 13 111229737 111229738 T - 14 GENIC possibly homozygous 50376548 13 111229873 111229874 A G 34 GENIC possibly homozygous 49991766 13 111230182 111230183 G T 32 GENIC homozygous 50376550 13 111230319 111230320 T G 30 GENIC possibly homozygous 50376552 13 111230496 111230497 T C 31 GENIC homozygous 51205460 13 111230505 111230506 G A 36 GENIC possibly homozygous 51205461 13 111230705 111230706 C T 21 GENIC possibly homozygous 51205462 13 111230858 111230859 G A 23 GENIC homozygous 51205463 13 111231118 111231119 T C 27 GENIC possibly homozygous 51205464 13 111231314 111231315 A T 27 GENIC homozygous 51205465 13 111231799 111231800 G C 25 GENIC possibly homozygous 51205466 13 111232131 111232132 T A 26 GENIC possibly homozygous 51205467