chr start stop reference nuc variant nuc depth genic status zygosity variant ID 12 47698962 47698963 T A 13 GENIC homozygous 50487285 12 47699463 47699464 T C 22 GENIC homozygous 50487287 12 47699571 47699572 C CTT 26 GENIC homozygous 50487289 12 47699573 47699574 G GTT 25 GENIC homozygous 50487293 12 47699989 47699991 TT -- 20 GENIC homozygous 50487295 12 47700156 47700157 A G 17 GENIC homozygous 50487297 12 47700509 47700519 TTTTTTTTTT ---------- 14 INTERGENIC possibly homozygous 50487299 12 47700627 47700628 T C 24 INTERGENIC homozygous 50487301 12 47700683 47700684 T A 17 INTERGENIC homozygous 50487303 12 47700730 47700731 G A 13 INTERGENIC homozygous 50487305 12 47700814 47700815 A G 14 INTERGENIC homozygous 50487307 12 47700882 47700883 T C 28 INTERGENIC homozygous 50487309 12 47700930 47700931 T C 29 INTERGENIC homozygous 50487312 12 47700932 47700933 C T 29 INTERGENIC homozygous 50487314 12 47700947 47700948 T C 27 INTERGENIC homozygous 50487316 12 47700977 47700978 C CA 21 INTERGENIC homozygous 50487319 12 47700978 47700979 G GTCA 21 INTERGENIC homozygous 50487321 12 47700985 47700986 T C 20 INTERGENIC homozygous 50487323 12 47701038 47701039 T C 14 INTERGENIC homozygous 50487325 12 47701051 47701052 G GTGGT 13 INTERGENIC homozygous 50487327 12 47701080 47701081 A - 11 INTERGENIC homozygous 50487329 12 47701092 47701093 C CCCA 10 INTERGENIC homozygous 50487331 12 47701126 47701127 G C 3 INTERGENIC homozygous 50502993 12 47701129 47701130 T C 5 INTERGENIC homozygous 50502994 12 47701137 47701138 A G 6 INTERGENIC homozygous 50546042 12 47701192 47701193 A G 3 INTERGENIC homozygous 50487333 12 47701206 47701207 G C 6 INTERGENIC homozygous 50487335 12 47701308 47701309 G T 21 INTERGENIC homozygous 50487337 12 47701328 47701329 C G 18 INTERGENIC homozygous 50487339 12 47701329 47701330 G T 18 INTERGENIC homozygous 50546043 12 47701333 47701335 CC -- 20 INTERGENIC homozygous 50487341 12 47701355 47701356 C A 17 INTERGENIC homozygous 50487343 12 47701428 47701429 G A 15 INTERGENIC homozygous 50487345 12 47701442 47701443 C T 18 INTERGENIC homozygous 50487347 12 47701479 47701480 T A 20 INTERGENIC homozygous 50487349 12 47701507 47701509 GG -- 16 INTERGENIC homozygous 50487351 12 47701510 47701517 GAAAAAG ------- 15 INTERGENIC homozygous 50487353 12 47701525 47701526 G A 10 INTERGENIC homozygous 50546044 12 47701526 47701527 A C 10 INTERGENIC homozygous 50546045 12 47701549 47701567 GGCATGGAAGTTCCCATG ------------------ 9 INTERGENIC homozygous 50487355 12 47701571 47701575 AACC ---- 6 INTERGENIC homozygous 50487361 12 47701585 47701586 A G 6 INTERGENIC homozygous 50487363 12 47701689 47701690 C T 11 INTERGENIC homozygous 50487365 12 47701707 47701708 C T 11 INTERGENIC homozygous 50487367 12 47701710 47701711 C G 11 INTERGENIC homozygous 50487369 12 47701740 47701741 C T 13 INTERGENIC homozygous 50487371 12 47701765 47701766 A G 14 INTERGENIC homozygous 50487373 12 47701827 47701828 A G 8 INTERGENIC homozygous 50487375 12 47701914 47701915 T C 7 INTERGENIC homozygous 50487377 12 47701952 47701953 C T 8 INTERGENIC homozygous 50487379 12 47701995 47701996 T C 10 INTERGENIC homozygous 50487381 12 47702026 47702027 T C 14 INTERGENIC homozygous 50487383 12 47702133 47702134 G A 12 INTERGENIC homozygous 50487385 12 47702166 47702167 A T 11 INTERGENIC homozygous 50487387 12 47702224 47702228 GTGT ---- 11 INTERGENIC homozygous 50487389 12 47702252 47702253 A ATGCG 4 INTERGENIC heterozygous 50546046 12 47702252 47702253 A ATGTGTG 4 INTERGENIC heterozygous 50565828 12 47702278 47702279 G GTGTA 11 INTERGENIC possibly homozygous 50546047 12 47702349 47702350 C CTTTTT 14 INTERGENIC homozygous 50546048 12 47702627 47702628 C T 26 INTERGENIC homozygous 50487397 12 47702751 47702752 C - 16 INTERGENIC homozygous 50487399 12 47702752 47702753 C A 16 INTERGENIC homozygous 50546049 12 47702770 47702771 G A 20 INTERGENIC possibly homozygous 50487401 12 47702809 47702810 G A 23 INTERGENIC homozygous 50487403 12 47702817 47702818 T G 25 INTERGENIC homozygous 50487405 12 47702909 47702910 A G 23 INTERGENIC homozygous 50487407 12 47702911 47702912 G A 22 INTERGENIC homozygous 50487409 12 47702941 47702945 GTTA ---- 21 INTERGENIC homozygous 50487411 12 47702955 47702956 G A 23 INTERGENIC homozygous 50546050 12 47702956 47702957 C G 23 INTERGENIC homozygous 50546051 12 47703120 47703121 A AG 17 INTERGENIC homozygous 50487413 12 47703417 47703430 ACTACTACTCACA ------------- 9 INTERGENIC homozygous 50487415 12 47703720 47703721 A G 27 INTERGENIC homozygous 50487419 12 47704071 47704072 A AG 2 INTERGENIC homozygous 50487428 12 47704072 47704073 T TC 3 INTERGENIC homozygous 50487430 12 47704104 47704128 CACACACACACACACACACACACA ------------------------ 9 INTERGENIC homozygous 50546052 12 47704316 47704317 G A 20 INTERGENIC homozygous 50487432 12 47704472 47704473 A G 9 INTERGENIC homozygous 50487434 12 47704792 47704793 T C 2 INTERGENIC homozygous 50487436 12 47705193 47705194 T G 16 INTERGENIC homozygous 50487438 12 47705319 47705320 C T 11 INTERGENIC homozygous 50487440 12 47705745 47705746 C CAAAAAAAA 3 INTERGENIC homozygous 50546053 12 47705749 47705750 A AAGAAAAGAAAAGAAAAG 5 INTERGENIC homozygous 50546054 12 47705785 47705786 G GAAAGA 5 INTERGENIC homozygous 50546055 12 47706058 47706059 T TGG 1 INTERGENIC homozygous 50487448 12 47706086 47706087 T TGTGTGTGTGTGTGTATCGTGTGTGTGTATCATGTGTGTGTGTATCGTGTGTGA 5 INTERGENIC heterozygous 50546056 12 47706139 47706140 A AGT 12 INTERGENIC homozygous 50487456 12 47706385 47706386 A G 17 INTERGENIC homozygous 50546057 12 47706387 47706390 AAA --- 20 INTERGENIC homozygous 50546058 12 47706389 47706390 A ATTTG 20 INTERGENIC homozygous 50546059 12 47706392 47706393 G A 19 INTERGENIC homozygous 50546060 12 47706662 47706663 A C 12 INTERGENIC homozygous 50487460 12 47706673 47706674 G A 13 INTERGENIC homozygous 50487462 12 47706784 47706785 C G 7 INTERGENIC homozygous 50487464 12 47706911 47706912 G A 15 INTERGENIC homozygous 50487466 12 47707134 47707135 G T 15 INTERGENIC homozygous 50487468 12 47707265 47707266 T TGC 18 INTERGENIC possibly homozygous 50487473 12 47707267 47707268 T TG 18 INTERGENIC possibly homozygous 50487475 12 47707298 47707299 G GTA 8 INTERGENIC heterozygous 50546061 12 47707720 47707736 CACACACACGCACACA ---------------- 21 INTERGENIC homozygous 50487479 12 47707763 47707764 G A 15 INTERGENIC homozygous 50487481 12 47707771 47707772 G A 14 INTERGENIC homozygous 50487483 12 47707776 47707778 AG -- 14 INTERGENIC homozygous 50487485 12 47708402 47708403 T A 17 INTERGENIC homozygous 50487487 12 47708555 47708556 A G 16 INTERGENIC homozygous 50487489 12 47708657 47708658 G A 21 INTERGENIC homozygous 50487491 12 47709171 47709172 G T 23 INTERGENIC homozygous 50487493 12 47709177 47709178 T G 22 INTERGENIC homozygous 50487495 12 47709446 47709449 GTA --- 12 INTERGENIC homozygous 50487497 12 47709468 47709469 G A 13 INTERGENIC homozygous 50487499 12 47709536 47709537 C T 9 INTERGENIC homozygous 50487501 12 47709603 47709604 C T 16 INTERGENIC homozygous 50487503 12 47709992 47709993 T C 17 INTERGENIC homozygous 50487505 12 47710008 47710009 G A 13 INTERGENIC homozygous 50487507 12 47710011 47710012 T - 14 INTERGENIC homozygous 50487509 12 47710015 47710016 C T 13 INTERGENIC homozygous 50487511 12 47710035 47710036 C T 9 INTERGENIC homozygous 50487513 12 47710047 47710048 T G 5 INTERGENIC homozygous 50487515 12 47710086 47710087 G A 12 INTERGENIC homozygous 50487517 12 47710089 47710091 TC -- 12 INTERGENIC homozygous 50487519 12 47710136 47710137 C T 20 INTERGENIC homozygous 50487521 12 47710142 47710143 C T 20 INTERGENIC homozygous 50487523 12 47710149 47710152 GTC --- 21 INTERGENIC homozygous 50487525 12 47710155 47710156 T G 20 INTERGENIC homozygous 50546062 12 47710156 47710157 T A 20 INTERGENIC homozygous 50546063 12 47710275 47710276 A G 19 INTERGENIC homozygous 50487527 12 47710308 47710309 G A 19 INTERGENIC homozygous 50487529 12 47710405 47710406 A G 21 INTERGENIC homozygous 50487531 12 47710981 47710982 A - 12 INTERGENIC homozygous 50487533 12 47711145 47711147 AC -- 2 INTERGENIC heterozygous 50559320 12 47711217 47711218 C T 15 INTERGENIC homozygous 50487535 12 47711563 47711564 A G 20 INTERGENIC homozygous 50487537 12 47711806 47711807 G C 14 INTERGENIC homozygous 50487539 12 47712117 47712118 T G 10 INTERGENIC homozygous 50487541 12 47712241 47712242 A G 8 INTERGENIC homozygous 50487543 12 47712251 47712252 A AC 7 INTERGENIC homozygous 50487545 12 47712423 47712424 C A 17 INTERGENIC homozygous 50487547 12 47712783 47712784 T C 19 INTERGENIC homozygous 50487549 12 47712889 47712890 G A 26 INTERGENIC homozygous 50487551 12 47712900 47712901 C T 28 INTERGENIC possibly homozygous 50487553 12 47712968 47712969 A T 43 INTERGENIC homozygous 50223115 12 47712990 47712991 C A 32 INTERGENIC homozygous 50223117 12 47712992 47712993 C A 29 INTERGENIC homozygous 50223119 12 47713007 47713008 C A 21 INTERGENIC homozygous 50223121 12 47713015 47713016 T A 17 INTERGENIC homozygous 50223125 12 47713017 47713018 C A 16 INTERGENIC homozygous 50223127 12 47713020 47713021 G A 6 INTERGENIC homozygous 50487555 12 47713041 47713042 C A 6 INTERGENIC homozygous 50223133 12 47713045 47713046 G A 7 INTERGENIC homozygous 50223135 12 47713049 47713050 C A 6 INTERGENIC homozygous 50223137 12 47713057 47713058 C A 8 INTERGENIC homozygous 50223139 12 47713071 47713072 C A 9 INTERGENIC homozygous 50223141 12 47713073 47713074 C A 9 INTERGENIC homozygous 50223143 12 47713089 47713090 C A 12 INTERGENIC homozygous 50223145 12 47713094 47713095 T C 14 INTERGENIC homozygous 50223147 12 47713101 47713102 C A 15 INTERGENIC homozygous 50223149 12 47713125 47713126 C A 22 INTERGENIC homozygous 50223151 12 47713127 47713128 C A 22 INTERGENIC homozygous 50223153 12 47713132 47713133 C A 22 INTERGENIC homozygous 50223155 12 47713140 47713141 C A 22 INTERGENIC homozygous 50487557 12 47713146 47713147 C A 21 INTERGENIC homozygous 50223157 12 47713282 47713284 AC -- 10 INTERGENIC homozygous 50223161 12 47713382 47713383 T C 15 INTERGENIC homozygous 50487563 12 47713460 47713461 A G 14 INTERGENIC homozygous 50487565 12 47714199 47714200 A G 17 INTERGENIC homozygous 50487567 12 47714204 47714205 G A 16 INTERGENIC homozygous 50487569 12 47714357 47714358 A - 13 INTERGENIC homozygous 50223163 12 47714360 47714361 C G 12 INTERGENIC homozygous 50343210 12 47714401 47714402 T TG 7 INTERGENIC homozygous 50487571 12 47714508 47714509 C CT 8 INTERGENIC homozygous 50223167 12 47714511 47714512 A - 8 INTERGENIC homozygous 50223169 12 47714530 47714531 C T 4 INTERGENIC homozygous 50487573 12 47714567 47714568 G T 9 INTERGENIC homozygous 50223171 12 47714583 47714584 G A 8 INTERGENIC homozygous 50223173 12 47714584 47714585 C A 8 INTERGENIC homozygous 50513492 12 47714586 47714587 G C 8 INTERGENIC homozygous 50513494 12 47714608 47714609 C T 8 INTERGENIC homozygous 50223175 12 47714609 47714610 A T 9 INTERGENIC homozygous 50223177 12 47714946 47714947 T C 4 INTERGENIC homozygous 50487575 12 47715809 47715810 C A 24 INTERGENIC homozygous 50487577 12 47715952 47715953 C CATACACACACACAAACATGCATACGCACACACACACATCATACATCACACACACACATCATACATCACATATACACACACATACACACATCGTACATCATACACACATATTATATATCACACACACAGGCACACACACATCATACCTCACACACACATCATACATCACATACACACACACAGAT 33 INTERGENIC possibly homozygous 50546064 12 47715966 47715967 C CGCATACACACACATATACACACACATATCATACATCACACACCATACATCACATATACACACACATACACACATCATACATCATACATACACATCATATATCACACACACACAGGCACACACACACATCATACCTCACACACACACACATCATACATCACACACACACACATAAACATACGCACATAATCATACATCACATACACACACAGACACACACACAA 28 INTERGENIC homozygous 50546065 12 47716008 47716009 G A 21 INTERGENIC homozygous 50487585 12 47716093 47716094 G A 24 INTERGENIC homozygous 50487587 12 47716332 47716333 G A 10 INTERGENIC homozygous 50487589 12 47716335 47716336 A C 11 INTERGENIC homozygous 50487591 12 47716409 47716410 G A 20 INTERGENIC homozygous 50487593 12 47716425 47716426 A G 16 INTERGENIC homozygous 50487595 12 47716495 47716498 AAA --- 12 INTERGENIC homozygous 50487597 12 47716719 47716720 G A 23 INTERGENIC homozygous 50487599 12 47716750 47716751 C T 18 INTERGENIC homozygous 50487601 12 47716837 47716838 C A 20 INTERGENIC homozygous 50487603 12 47716921 47716922 C T 21 INTERGENIC homozygous 50487605 12 47717223 47717224 G T 26 INTERGENIC homozygous 50487607 12 47717346 47717347 G A 14 INTERGENIC homozygous 50487609 12 47717430 47717431 G C 6 INTERGENIC homozygous 50487610 12 47718023 47718024 G A 6 GENIC homozygous 50487612 12 47718511 47718512 T C 9 GENIC homozygous 50487614 12 47718518 47718519 C CTGTGTGTGTGTGTA 9 GENIC homozygous 50546067 12 47718580 47718581 T C 6 GENIC homozygous 50487616 12 47718672 47718673 T C 9 GENIC homozygous 50487618 12 47718701 47718702 T TC 7 GENIC homozygous 50546068 12 47718705 47718706 A - 7 GENIC homozygous 50546069 12 47719741 47719742 C T 6 GENIC homozygous 50487620 12 47719789 47719790 C G 3 GENIC homozygous 50487622 12 47719917 47719918 C T 8 GENIC homozygous 50487624 12 47720196 47720197 G T 7 GENIC homozygous 50487626 12 47720236 47720237 A G 10 GENIC homozygous 50487628 12 47720283 47720284 C T 8 GENIC homozygous 50487630 12 47720428 47720429 G A 9 GENIC homozygous 50487632 12 47720910 47720911 G A 22 GENIC homozygous 50487634 12 47721226 47721227 A G 18 GENIC homozygous 50487636 12 47721646 47721647 C T 19 GENIC possibly homozygous 50487638 12 47721852 47721853 T - 10 GENIC homozygous 50487640 12 47721877 47721878 C T 17 GENIC homozygous 50487642 12 47722112 47722113 T C 18 GENIC homozygous 50487644 12 47722127 47722128 T G 18 GENIC homozygous 50487646 12 47722129 47722130 G A 20 GENIC homozygous 50487648 12 47722442 47722443 T C 30 GENIC homozygous 50487650 12 47722569 47722570 A C 14 GENIC homozygous 50487652 12 47723169 47723170 T C 18 GENIC homozygous 50487654 12 47723216 47723217 C T 14 GENIC homozygous 50487656 12 47723501 47723502 C CA 14 GENIC possibly homozygous 50487658 12 47723507 47723508 C CA 13 GENIC homozygous 50546070 12 47723517 47723518 A AC 11 GENIC homozygous 50470642 12 47723706 47723707 T C 15 GENIC homozygous 50487662 12 47724139 47724145 GGAGGA ------ 9 GENIC homozygous 50487664 12 47724295 47724296 T C 11 GENIC homozygous 50487666 12 47724353 47724354 A G 3 GENIC homozygous 50487668 12 47724646 47724647 G A 17 GENIC homozygous 50487670 12 47724720 47724721 T C 18 GENIC homozygous 50487672 12 47724823 47724824 C T 18 GENIC homozygous 50487674 12 47725131 47725132 A G 20 GENIC homozygous 50487676 12 47725161 47725162 C T 18 GENIC homozygous 50487678 12 47725333 47725334 T C 10 GENIC homozygous 50487680 12 47725414 47725418 GTGT ---- 7 GENIC heterozygous 50413355 12 47725416 47725418 GT -- 7 GENIC possibly homozygous 50223187 12 47725499 47725500 C T 21 GENIC homozygous 50487682 12 47725500 47725501 A G 21 GENIC homozygous 50487683 12 47725559 47725561 AT -- 23 GENIC homozygous 50487685 12 47725566 47725570 TGTG ---- 29 GENIC homozygous 50487687 12 47725602 47725604 TG -- 27 GENIC homozygous 50487691 12 47725619 47725620 C T 29 GENIC homozygous 50487693 12 47725868 47725869 A G 19 GENIC homozygous 50487695 12 47726043 47726044 A T 18 GENIC homozygous 50487697 12 47726046 47726047 G A 17 GENIC homozygous 50487699 12 47726287 47726288 A G 11 GENIC homozygous 50487701 12 47726854 47726855 T C 7 GENIC homozygous 50487703 12 47726860 47726861 A AG 7 GENIC homozygous 50487705 12 47727012 47727013 G T 11 GENIC homozygous 50487707 12 47727275 47727276 A T 7 GENIC homozygous 50487710 12 47727293 47727294 G C 4 GENIC homozygous 50487712 12 47727815 47727816 A G 14 GENIC homozygous 50487716 12 47729778 47729779 T C 9 GENIC homozygous 50487718 12 47730509 47730510 G C 15 GENIC homozygous 50487720 12 47731584 47731585 A G 21 GENIC homozygous 50487722 12 47733250 47733251 A G 16 INTERGENIC homozygous 50487726 12 47733682 47733683 A G 17 INTERGENIC homozygous 50387853 12 47733739 47733740 T TGAGCACAGGCACACCTGGGTATAGGGTACACCTG 15 INTERGENIC homozygous 50513496 12 47734158 47734159 A T 11 INTERGENIC homozygous 50487728 12 47735004 47735012 GATGGATC -------- 1 INTERGENIC homozygous 50546072 12 47735414 47735417 GTT --- 15 INTERGENIC homozygous 50223195 12 47735512 47735513 A AGAG 21 INTERGENIC homozygous 50487730 12 47736325 47736327 CC -- 5 INTERGENIC heterozygous 50487732 12 47736999 47737000 C A 6 INTERGENIC homozygous 50223197 12 47737001 47737006 CCCCC ----- 7 INTERGENIC homozygous 50546073 12 47737005 47737006 C CTGGAA 6 INTERGENIC homozygous 50546074 12 47737158 47737159 C CT 7 INTERGENIC homozygous 50223207 12 47737160 47737161 C CA 8 INTERGENIC homozygous 50223209 12 47737675 47737676 T C 21 INTERGENIC homozygous 50487734