chr start stop reference nuc variant nuc depth genic status zygosity variant ID 12 49627088 49627089 C CTAGTTCTGGGCGTGA 3 INTERGENIC homozygous 50623546 12 49627109 49627110 T C 9 INTERGENIC homozygous 50470902 12 49627648 49627649 T C 5 INTERGENIC heterozygous 50470903 12 49627685 49627686 G GCA 9 INTERGENIC homozygous 50470904 12 49627892 49627893 T C 18 INTERGENIC possibly homozygous 50470905 12 49627962 49627963 T TCA 6 INTERGENIC homozygous 50470906 12 49627976 49627977 T C 14 INTERGENIC possibly homozygous 50470907 12 49630567 49630568 C T 24 INTERGENIC possibly homozygous 50470910 12 49630698 49630699 A G 19 INTERGENIC homozygous 50470911 12 49630870 49630871 A G 14 INTERGENIC homozygous 50470912 12 49631217 49631218 A G 11 INTERGENIC possibly homozygous 50470913 12 49631707 49631708 C T 21 INTERGENIC homozygous 50470914 12 49631739 49631740 A G 12 INTERGENIC homozygous 50470915 12 49633095 49633096 G C 6 INTERGENIC heterozygous 50470917 12 49633710 49633711 C T 12 INTERGENIC homozygous 50470918 12 49634481 49634482 T G 5 INTERGENIC heterozygous 50470919 12 49634780 49634781 A C 28 INTERGENIC possibly homozygous 50470920 12 49635937 49635938 C A 17 INTERGENIC possibly homozygous 50470921 12 49637130 49637131 A G 10 INTERGENIC homozygous 50470922 12 49637966 49637967 G A 12 INTERGENIC homozygous 50470924 12 49638157 49638158 G A 9 INTERGENIC homozygous 50470925 12 49639745 49639746 C T 19 INTERGENIC homozygous 50470926 12 49641067 49641068 T C 15 INTERGENIC homozygous 50470927 12 49642730 49642731 T TC 5 INTERGENIC homozygous 50470929 12 49642799 49642800 G A 8 INTERGENIC homozygous 50470930 12 49643922 49643923 C CAGAG 1 INTERGENIC homozygous 50470931 12 49644533 49644535 AG -- 17 INTERGENIC heterozygous 50470933 12 49644867 49644868 A G 10 INTERGENIC possibly homozygous 50470934 12 49644908 49644909 C T 14 INTERGENIC homozygous 50470935 12 49644952 49644953 G A 11 INTERGENIC homozygous 50470936 12 49645036 49645037 T C 5 INTERGENIC homozygous 50470937 12 49645127 49645128 A G 13 INTERGENIC homozygous 50470938 12 49645162 49645163 A G 9 INTERGENIC heterozygous 50470939 12 49645292 49645293 T C 11 INTERGENIC heterozygous 50470940 12 49645361 49645362 C T 12 INTERGENIC homozygous 50470941 12 49645372 49645373 C T 8 INTERGENIC homozygous 50470942 12 49645447 49645448 T - 7 INTERGENIC homozygous 50470943 12 49645466 49645467 G GCGGACGCACGCACGCACGCA 1 INTERGENIC homozygous 50623577 12 49645475 49645476 T C 3 INTERGENIC homozygous 50470945 12 49645593 49645594 C CA 2 INTERGENIC homozygous 50234079 12 49645594 49645595 T TC 2 INTERGENIC homozygous 50234081 12 49645599 49645600 T TCC 2 INTERGENIC homozygous 50234083 12 49645609 49645610 A AG 1 INTERGENIC homozygous 50234085 12 49645614 49645615 T TG 1 INTERGENIC homozygous 50234087 12 49645618 49645619 G GC 1 INTERGENIC homozygous 50234089 12 49645650 49645651 T TA 3 INTERGENIC heterozygous 50234091 12 49645661 49645662 G GA 2 INTERGENIC homozygous 50234093 12 49645718 49645719 G A 7 INTERGENIC homozygous 50470946 12 49646632 49646633 T C 15 INTERGENIC possibly homozygous 50470947 12 49646949 49646950 G A 9 INTERGENIC possibly homozygous 50470948 12 49647483 49647484 T C 21 INTERGENIC homozygous 50470949 12 49647571 49647572 G A 23 INTERGENIC possibly homozygous 50470950 12 49647625 49647626 T G 15 INTERGENIC homozygous 50470951 12 49648051 49648052 T C 14 INTERGENIC heterozygous 50470954 12 49648052 49648053 G A 14 INTERGENIC heterozygous 50470955 12 49650617 49650618 A - 1 INTERGENIC homozygous 50470957 12 49658372 49658373 G A 4 INTERGENIC heterozygous 50234101 12 49650765 49650766 A C 7 INTERGENIC possibly homozygous 50470958 12 49655343 49655344 T C 10 INTERGENIC homozygous 50470961 12 49655506 49655507 T C 6 INTERGENIC homozygous 50470962 12 49658377 49658378 T C 4 INTERGENIC heterozygous 50470964 12 49664434 49664435 T C 13 INTERGENIC homozygous 50234107 12 49664991 49664992 G C 7 INTERGENIC possibly homozygous 50234109 12 49666068 49666069 C T 17 INTERGENIC possibly homozygous 50470970 12 49666336 49666337 C T 14 INTERGENIC possibly homozygous 50470971 12 49667875 49667876 G T 17 INTERGENIC homozygous 50470972 12 49667918 49667919 T C 21 INTERGENIC possibly homozygous 50470973 12 49668046 49668047 G T 12 INTERGENIC heterozygous 50234113 12 49668749 49668753 AAGT ---- 1 INTERGENIC homozygous 50470975 12 49668918 49668919 A ATCTTTATTTATT 1 INTERGENIC homozygous 50829188 12 49669143 49669144 T C 13 INTERGENIC homozygous 50470977 12 49669546 49669547 C T 28 INTERGENIC possibly homozygous 50470978 12 49669594 49669595 T C 18 INTERGENIC possibly homozygous 50470979 12 49669763 49669764 A AC 4 INTERGENIC homozygous 50470980 12 49670022 49670023 T C 11 INTERGENIC possibly homozygous 50470981 12 49670069 49670070 C T 15 INTERGENIC homozygous 50470982 12 49670204 49670206 TT -- 7 INTERGENIC homozygous 50470983 12 49670461 49670462 T C 3 INTERGENIC homozygous 50470985 12 49670498 49670499 C T 4 INTERGENIC homozygous 50470986 12 49670503 49670504 T C 4 INTERGENIC homozygous 50470987 12 49670560 49670561 T G 20 INTERGENIC possibly homozygous 50470988 12 49671012 49671013 A C 10 INTERGENIC possibly homozygous 50470989 12 49671181 49671182 T C 13 INTERGENIC heterozygous 50470990 12 49671398 49671413 GAGGAGAGTAGAGTA --------------- 4 INTERGENIC heterozygous 50234115 12 49671406 49671407 T G 3 INTERGENIC heterozygous 50470991 12 49671411 49671412 T G 4 INTERGENIC heterozygous 50470992 12 49671801 49671802 G A 2 INTERGENIC homozygous 50470993 12 49671802 49671803 C T 2 INTERGENIC homozygous 50470994 12 49671809 49671810 C T 1 INTERGENIC homozygous 50470995 12 49671893 49671894 T C 13 INTERGENIC possibly homozygous 50470996 12 49671948 49671949 T C 9 INTERGENIC homozygous 50470997 12 49671958 49671959 A G 6 INTERGENIC heterozygous 50470998 12 49671983 49671984 A AT 6 INTERGENIC homozygous 50234117 12 49671989 49671990 T - 5 INTERGENIC homozygous 50234119 12 49672045 49672046 T - 2 INTERGENIC heterozygous 50234121 12 49672052 49672053 C - 1 INTERGENIC homozygous 50234123 12 49672065 49672066 A - 2 INTERGENIC homozygous 50234125 12 49674018 49674019 A G 16 INTERGENIC homozygous 50234129 12 49674526 49674653 AAGAGAGGGTAGAGAGGGGCTGGGGATTTAGCTCAGTGGTAGAGCGCTTACCTAGGAAGCGCAAGGCCCTGGGTTCGGTCCCCAGCTCCGGAAAAAAAAAAAAAAAGACCAAAAAAAAAAAAATGCA ------------------------------------------------------------------------------------------------------------------------------- 7 INTERGENIC homozygous 50513793 12 49674868 49674869 T C 11 INTERGENIC homozygous 50470999 12 49675577 49675578 C T 15 INTERGENIC possibly homozygous 50471001 12 49676689 49676690 T C 14 INTERGENIC possibly homozygous 50471002 12 49677107 49677108 C T 8 INTERGENIC possibly homozygous 50471003 12 49677154 49677155 T TG 8 INTERGENIC heterozygous 50623623 12 49677155 49677156 G - 8 INTERGENIC possibly homozygous 50471004 12 49678087 49678088 A G 9 INTERGENIC heterozygous 50471005 12 49686413 49686414 G GT 4 INTERGENIC homozygous 50471007 12 49686698 49686701 TTT --- 4 INTERGENIC heterozygous 50471008 12 49686717 49686718 T - 3 INTERGENIC homozygous 50471009 12 49686795 49686796 G A 1 INTERGENIC homozygous 50471010 12 49686798 49686799 C T 1 INTERGENIC homozygous 50471011 12 49687106 49687107 T C 11 INTERGENIC homozygous 50471012 12 49687804 49687805 C T 18 INTERGENIC homozygous 50471014 12 49688688 49688689 C T 3 INTERGENIC homozygous 50234135 12 49688694 49688695 C A 3 INTERGENIC heterozygous 50234137 12 49689245 49689246 G GC 3 INTERGENIC heterozygous 50234139 12 49689407 49689408 G GA 2 INTERGENIC homozygous 50471015 12 49690189 49690190 G A 15 INTERGENIC homozygous 50471017 12 49690592 49690593 C T 9 INTERGENIC homozygous 50471018 12 49690654 49690655 T G 7 INTERGENIC heterozygous 50234149 12 49690674 49690676 CT -- 2 INTERGENIC heterozygous 50234151 12 49690675 49690676 T - 2 INTERGENIC heterozygous 50234153 12 49690699 49690700 A G 3 INTERGENIC homozygous 50234155 12 49691934 49691935 C CA 5 INTERGENIC heterozygous 50471019 12 49691935 49691936 C T 5 INTERGENIC heterozygous 50623633 12 49691973 49691974 A G 4 INTERGENIC homozygous 50234157 12 49692521 49692522 A - 23 INTERGENIC homozygous 50234159 12 49692644 49692645 A G 16 INTERGENIC homozygous 50234163 12 49693702 49693703 G A 10 INTERGENIC homozygous 50234169 12 49694371 49694372 C T 12 INTERGENIC homozygous 50234174 12 49695395 49695396 C T 7 GENIC homozygous 50471021 12 49695414 49695415 A G 5 GENIC homozygous 50234179 12 49696025 49696026 G C 8 GENIC homozygous 50234180 12 49696275 49696276 G T 7 GENIC homozygous 50471023 12 49696910 49696911 T C 11 GENIC homozygous 50234190 12 49698172 49698173 T C 5 GENIC heterozygous 50234198 12 49698497 49698498 G A 5 GENIC homozygous 50471024 12 49698536 49698537 A G 12 GENIC heterozygous 50234202 12 49699168 49699169 T C 12 GENIC possibly homozygous 50234206 12 49699517 49699518 C T 11 GENIC heterozygous 50234208 12 49700769 49700770 G T 23 GENIC possibly homozygous 50234214 12 49701393 49701394 C T 7 GENIC heterozygous 50471026 12 49702304 49702306 AC -- 2 GENIC homozygous 50471029 12 49702404 49702406 AG -- 4 GENIC heterozygous 50234236 12 49702938 49702939 A G 8 GENIC possibly homozygous 50471030 12 49703096 49703097 G A 7 GENIC possibly homozygous 50234239 12 49703128 49703129 A G 5 GENIC heterozygous 50234241 12 49703139 49703140 A G 4 GENIC homozygous 50471031 12 49703324 49703325 C T 6 GENIC homozygous 50234243 12 49703414 49703415 C CA 2 GENIC homozygous 50471033 12 49703849 49703850 A G 5 GENIC heterozygous 50471034 12 49704284 49704285 T C 17 GENIC homozygous 50234253 12 49704950 49704951 C A 13 GENIC heterozygous 50234257 12 49730472 49730473 T C 2 INTERGENIC heterozygous 50234349 12 49706377 49706378 T C 16 GENIC homozygous 50234269 12 49720647 49720648 A ACCC 4 GENIC homozygous 50234319 12 49730075 49730076 T A 34 INTERGENIC possibly homozygous 50234345