chr start stop reference nuc variant nuc depth genic status zygosity variant ID 12 49627088 49627089 C CTAGTTCTGGGCGTGA 29 INTERGENIC homozygous 50623546 12 49627109 49627110 T C 22 INTERGENIC homozygous 50470902 12 49627648 49627649 T C 32 INTERGENIC homozygous 50470903 12 49627685 49627686 G GCA 29 INTERGENIC possibly homozygous 50470904 12 49627892 49627893 T C 62 INTERGENIC homozygous 50470905 12 49627962 49627963 T TCA 44 INTERGENIC homozygous 50470906 12 49627976 49627977 T C 43 INTERGENIC homozygous 50470907 12 49628031 49628035 ACTC ---- 15 INTERGENIC homozygous 50470908 12 49628057 49628067 ATACACACAT ---------- 17 INTERGENIC homozygous 50829174 12 49630431 49630432 T TAAA 1 INTERGENIC homozygous 50470909 12 49630567 49630568 C T 9 INTERGENIC homozygous 50470910 12 49630698 49630699 A G 24 INTERGENIC homozygous 50470911 12 49630870 49630871 A G 21 INTERGENIC homozygous 50470912 12 49631217 49631218 A G 15 INTERGENIC homozygous 50470913 12 49631707 49631708 C T 15 INTERGENIC homozygous 50470914 12 49631739 49631740 A G 20 INTERGENIC homozygous 50470915 12 49632463 49632464 G GT 17 INTERGENIC possibly homozygous 50470916 12 49633095 49633096 G C 32 INTERGENIC homozygous 50470917 12 49633710 49633711 C T 19 INTERGENIC homozygous 50470918 12 49634481 49634482 T G 17 INTERGENIC homozygous 50470919 12 49634780 49634781 A C 23 INTERGENIC homozygous 50470920 12 49635937 49635938 C A 24 INTERGENIC homozygous 50470921 12 49637130 49637131 A G 18 INTERGENIC homozygous 50470922 12 49637764 49637765 T TAC 16 INTERGENIC heterozygous 50470923 12 49637966 49637967 G A 30 INTERGENIC homozygous 50470924 12 49638157 49638158 G A 19 INTERGENIC homozygous 50470925 12 49639745 49639746 C T 21 INTERGENIC homozygous 50470926 12 49641067 49641068 T C 35 INTERGENIC homozygous 50470927 12 49642627 49642628 T TTTC 12 INTERGENIC homozygous 50470928 12 49642730 49642731 T TC 19 INTERGENIC homozygous 50470929 12 49642799 49642800 G A 18 INTERGENIC homozygous 50470930 12 49643922 49643923 C CAGAG 15 INTERGENIC homozygous 50470931 12 49644095 49644096 G A 11 INTERGENIC homozygous 50470932 12 49644533 49644535 AG -- 17 INTERGENIC homozygous 50470933 12 49644867 49644868 A G 34 INTERGENIC homozygous 50470934 12 49644908 49644909 C T 33 INTERGENIC homozygous 50470935 12 49644952 49644953 G A 31 INTERGENIC homozygous 50470936 12 49645036 49645037 T C 35 INTERGENIC homozygous 50470937 12 49645127 49645128 A G 25 INTERGENIC homozygous 50470938 12 49645162 49645163 A G 18 INTERGENIC possibly homozygous 50470939 12 49645292 49645293 T C 24 INTERGENIC homozygous 50470940 12 49645361 49645362 C T 20 INTERGENIC homozygous 50470941 12 49645372 49645373 C T 22 INTERGENIC homozygous 50470942 12 49645447 49645448 T - 23 INTERGENIC homozygous 50470943 12 49645466 49645467 G GCGGACGCACGCACGCACGCA 23 INTERGENIC homozygous 50623577 12 49645475 49645476 T C 22 INTERGENIC homozygous 50470945 12 49645593 49645594 C CA 6 INTERGENIC homozygous 50234079 12 49645594 49645595 T TC 6 INTERGENIC homozygous 50234081 12 49645599 49645600 T TCC 6 INTERGENIC homozygous 50234083 12 49645609 49645610 A AG 6 INTERGENIC homozygous 50234085 12 49645614 49645615 T TG 7 INTERGENIC homozygous 50234087 12 49645618 49645619 G GC 7 INTERGENIC homozygous 50234089 12 49645650 49645651 T TA 15 INTERGENIC homozygous 50234091 12 49645661 49645662 G GA 16 INTERGENIC homozygous 50234093 12 49645718 49645719 G A 25 INTERGENIC homozygous 50470946 12 49646632 49646633 T C 24 INTERGENIC homozygous 50470947 12 49646949 49646950 G A 27 INTERGENIC homozygous 50470948 12 49647207 49647208 G GTGTGACAGTCAACCCTC 22 INTERGENIC homozygous 50623579 12 49647483 49647484 T C 29 INTERGENIC homozygous 50470949 12 49647571 49647572 G A 20 INTERGENIC homozygous 50470950 12 49647625 49647626 T G 24 INTERGENIC possibly homozygous 50470951 12 49647728 49647729 G GGAAGGAAGGAAGGAAGGAAA 10 INTERGENIC homozygous 50829176 12 49648051 49648052 T C 12 INTERGENIC homozygous 50470954 12 49648052 49648053 G A 12 INTERGENIC homozygous 50470955 12 49650617 49650618 A - 8 INTERGENIC homozygous 50470957 12 49650765 49650766 A C 23 INTERGENIC homozygous 50470958 12 49650910 49650911 C T 22 INTERGENIC homozygous 50470959 12 49655343 49655344 T C 18 INTERGENIC homozygous 50470961 12 49655506 49655507 T C 30 INTERGENIC homozygous 50470962 12 49656183 49656184 T TTC 2 INTERGENIC homozygous 50829178 12 49656185 49656186 T TTC 2 INTERGENIC homozygous 50829180 12 49657316 49657321 CCTCC ----- 11 INTERGENIC heterozygous 50559390 12 49658005 49658006 T - 13 INTERGENIC heterozygous 50575802 12 49658372 49658373 G A 24 INTERGENIC homozygous 50234101 12 49658377 49658378 T C 24 INTERGENIC homozygous 50470964 12 49658429 49658430 A G 37 INTERGENIC homozygous 50470965 12 49658913 49658933 TGTTGGAGGAGGTGTAGCCT -------------------- 27 INTERGENIC possibly homozygous 50829182 12 49658997 49658998 A G 24 INTERGENIC homozygous 50470968 12 49659209 49659210 C CA 24 INTERGENIC homozygous 50234103 12 49662332 49662336 TCAG ---- 6 INTERGENIC heterozygous 50546711 12 49662342 49662377 GTCAGGTTCCCCATCCTCTTCTGGACCCTCCTTCC ----------------------------------- 13 INTERGENIC heterozygous 50546712 12 49662622 49662623 C CTCTCTT 11 INTERGENIC heterozygous 50829184 12 49662785 49662786 A - 3 INTERGENIC heterozygous 50234105 12 49663911 49663912 T - 3 INTERGENIC homozygous 50423221 12 49664434 49664435 T C 18 INTERGENIC homozygous 50234107 12 49664991 49664992 G C 24 INTERGENIC homozygous 50234109 12 49665004 49665012 TCACACAC -------- 5 INTERGENIC heterozygous 50546713 12 49665004 49665010 TCACAC ------ 5 INTERGENIC heterozygous 50546714 12 49665849 49665850 G GAACCCT 3 INTERGENIC homozygous 50829186 12 49666068 49666069 C T 27 INTERGENIC homozygous 50470970 12 49668046 49668047 G T 31 INTERGENIC homozygous 50234113 12 49668742 49668746 ATCG ---- 21 INTERGENIC homozygous 50470974 12 49666336 49666337 C T 27 INTERGENIC possibly homozygous 50470971 12 49667875 49667876 G T 33 INTERGENIC homozygous 50470972 12 49667918 49667919 T C 34 INTERGENIC homozygous 50470973 12 49668749 49668753 AAGT ---- 21 INTERGENIC homozygous 50470975 12 49668918 49668919 A ATCTTTATTTATT 5 INTERGENIC homozygous 50829188 12 49669143 49669144 T C 14 INTERGENIC homozygous 50470977 12 49669546 49669547 C T 32 INTERGENIC homozygous 50470978 12 49669594 49669595 T C 29 INTERGENIC homozygous 50470979 12 49669763 49669764 A AC 24 INTERGENIC homozygous 50470980 12 49670022 49670023 T C 30 INTERGENIC homozygous 50470981 12 49670069 49670070 C T 24 INTERGENIC homozygous 50470982 12 49670204 49670206 TT -- 26 INTERGENIC homozygous 50470983 12 49670461 49670462 T C 13 INTERGENIC homozygous 50470985 12 49670498 49670499 C T 11 INTERGENIC homozygous 50470986 12 49670503 49670504 T C 11 INTERGENIC homozygous 50470987 12 49670560 49670561 T G 13 INTERGENIC homozygous 50470988 12 49671012 49671013 A C 35 INTERGENIC homozygous 50470989 12 49671181 49671182 T C 32 INTERGENIC homozygous 50470990 12 49671398 49671413 GAGGAGAGTAGAGTA --------------- 17 INTERGENIC homozygous 50234115 12 49671801 49671802 G A 18 INTERGENIC homozygous 50470993 12 49671802 49671803 C T 18 INTERGENIC homozygous 50470994 12 49671809 49671810 C T 16 INTERGENIC homozygous 50470995 12 49671893 49671894 T C 31 INTERGENIC homozygous 50470996 12 49671948 49671949 T C 17 INTERGENIC possibly homozygous 50470997 12 49671958 49671959 A G 13 INTERGENIC homozygous 50470998 12 49671983 49671984 A AT 8 INTERGENIC homozygous 50234117 12 49671989 49671990 T - 7 INTERGENIC homozygous 50234119 12 49672045 49672046 T - 7 INTERGENIC homozygous 50234121 12 49672052 49672053 C - 6 INTERGENIC homozygous 50234123 12 49672065 49672066 A - 6 INTERGENIC homozygous 50234125 12 49672263 49672281 CCCCAGGCAATGGCTCCA ------------------ 1 INTERGENIC homozygous 50829190 12 49674018 49674019 A G 24 INTERGENIC homozygous 50234129 12 49674868 49674869 T C 30 INTERGENIC homozygous 50470999 12 49674976 49674980 TTTT ---- 1 INTERGENIC homozygous 50471000 12 49675577 49675578 C T 23 INTERGENIC homozygous 50471001 12 49676689 49676690 T C 27 INTERGENIC homozygous 50471002 12 49677107 49677108 C T 28 INTERGENIC homozygous 50471003 12 49677155 49677156 G - 25 INTERGENIC homozygous 50471004 12 49678087 49678088 A G 10 INTERGENIC homozygous 50471005 12 49686413 49686414 G GT 22 INTERGENIC homozygous 50471007 12 49686698 49686701 TTT --- 7 INTERGENIC possibly homozygous 50471008 12 49686699 49686701 TT -- 7 INTERGENIC heterozygous 50623627 12 49686717 49686718 T - 10 INTERGENIC homozygous 50471009 12 49686795 49686796 G A 13 INTERGENIC homozygous 50471010 12 49686798 49686799 C T 13 INTERGENIC homozygous 50471011 12 49687106 49687107 T C 22 INTERGENIC homozygous 50471012 12 49687611 49687615 TGTG ---- 10 INTERGENIC homozygous 50471013 12 49687804 49687805 C T 23 INTERGENIC homozygous 50471014 12 49688688 49688689 C T 13 INTERGENIC homozygous 50234135 12 49688694 49688695 C A 17 INTERGENIC homozygous 50234137 12 49689245 49689246 G GC 6 INTERGENIC homozygous 50234139 12 49689407 49689408 G GA 11 INTERGENIC homozygous 50471015 12 49689842 49689843 A - 13 INTERGENIC homozygous 50471016 12 49690189 49690190 G A 24 INTERGENIC possibly homozygous 50471017 12 49690592 49690593 C T 13 INTERGENIC homozygous 50471018 12 49690654 49690655 T G 16 INTERGENIC homozygous 50234149 12 49690675 49690676 T - 12 INTERGENIC homozygous 50234153 12 49690699 49690700 A G 15 INTERGENIC homozygous 50234155 12 49691934 49691935 C CA 20 INTERGENIC homozygous 50471019 12 49691935 49691936 C T 20 INTERGENIC homozygous 50623633 12 49691973 49691974 A G 10 INTERGENIC homozygous 50234157 12 49692521 49692522 A - 20 INTERGENIC homozygous 50234159 12 49692644 49692645 A G 24 INTERGENIC homozygous 50234163 12 49693458 49693470 CACACTCTCTCT ------------ 14 INTERGENIC possibly homozygous 50471020 12 49693702 49693703 G A 28 INTERGENIC homozygous 50234169 12 49694371 49694372 C T 21 INTERGENIC homozygous 50234174 12 49695395 49695396 C T 17 GENIC homozygous 50471021 12 49695414 49695415 A G 22 GENIC homozygous 50234179 12 49696025 49696026 G C 34 GENIC homozygous 50234180 12 49696127 49696130 CCC --- 7 GENIC homozygous 50471022 12 49696275 49696276 G T 13 GENIC homozygous 50471023 12 49696910 49696911 T C 33 GENIC homozygous 50234190 12 49697833 49697834 C CT 5 GENIC homozygous 50234192 12 49698172 49698173 T C 10 GENIC homozygous 50234198 12 49698497 49698498 G A 33 GENIC homozygous 50471024 12 49698536 49698537 A G 29 GENIC homozygous 50234202 12 49699168 49699169 T C 23 GENIC homozygous 50234206 12 49699517 49699518 C T 18 GENIC homozygous 50234208 12 49702938 49702939 A G 30 GENIC homozygous 50471030 12 49700769 49700770 G T 20 GENIC homozygous 50234214 12 49701393 49701394 C T 22 GENIC homozygous 50471026 12 49702250 49702251 G GCA 11 GENIC heterozygous 50471027 12 49702304 49702306 AC -- 12 GENIC homozygous 50471029 12 49702404 49702406 AG -- 11 GENIC homozygous 50234236 12 49674526 49674653 AAGAGAGGGTAGAGAGGGGCTGGGGATTTAGCTCAGTGGTAGAGCGCTTACCTAGGAAGCGCAAGGCCCTGGGTTCGGTCCCCAGCTCCGGAAAAAAAAAAAAAAAGACCAAAAAAAAAAAAATGCA ------------------------------------------------------------------------------------------------------------------------------- 28 INTERGENIC homozygous 50513793 12 49703096 49703097 G A 24 GENIC homozygous 50234239 12 49703128 49703129 A G 24 GENIC homozygous 50234241 12 49703139 49703140 A G 22 GENIC homozygous 50471031 12 49703324 49703325 C T 14 GENIC homozygous 50234243 12 49703383 49703384 A - 11 GENIC heterozygous 50513795 12 49703414 49703415 C CA 10 GENIC homozygous 50471033 12 49703849 49703850 A G 18 GENIC homozygous 50471034 12 49704284 49704285 T C 24 GENIC homozygous 50234253 12 49704621 49704622 G GT 17 GENIC homozygous 50471035 12 49704950 49704951 C A 24 GENIC homozygous 50234257 12 49705981 49705987 TTTTTT ------ 13 GENIC homozygous 50234267 12 49705986 49705987 T TCACACACACACACA 7 GENIC homozygous 50623642 12 49706377 49706378 T C 23 GENIC homozygous 50234269 12 49710148 49710149 T TC 13 GENIC homozygous 50234285 12 49710317 49710324 AGCATGT ------- 22 GENIC homozygous 50234287 12 49720647 49720648 A ACCC 2 GENIC homozygous 50234319 12 49722236 49722237 C CAAAAAAAAAAAA 6 GENIC heterozygous 50546724 12 49730000 49730001 T A 46 INTERGENIC homozygous 50234339 12 49730001 49730002 T C 46 INTERGENIC homozygous 50234341 12 49730018 49730019 G A 47 INTERGENIC homozygous 50234343 12 49730075 49730076 T A 48 INTERGENIC homozygous 50234345 12 49730472 49730473 T C 25 INTERGENIC homozygous 50234349 12 49733932 49733933 C CTTT 3 INTERGENIC heterozygous 50559392 12 49733933 49733934 T - 3 INTERGENIC heterozygous 50234365