chr start stop reference nuc variant nuc depth genic status zygosity variant ID 12 44226799 44226800 C G 11 INTERGENIC heterozygous 50333931 12 44242754 44242755 G T 15 INTERGENIC possibly homozygous 50333935 12 44244013 44244014 A T 5 INTERGENIC homozygous 50333937 12 44244433 44244434 A G 2 INTERGENIC homozygous 50333939 12 44244437 44244438 C A 3 INTERGENIC heterozygous 50333941 12 44244923 44244924 A AT 5 INTERGENIC heterozygous 50333943 12 44245119 44245120 A AT 6 INTERGENIC homozygous 50333945 12 44245376 44245377 A G 5 INTERGENIC homozygous 50333947 12 44245734 44245735 C T 10 INTERGENIC homozygous 50333949 12 44246533 44246534 T C 4 INTERGENIC homozygous 50333955 12 44246749 44246750 C T 23 INTERGENIC homozygous 50333957 12 44247999 44248000 C T 3 INTERGENIC homozygous 50333960 12 44248576 44248577 G A 6 INTERGENIC homozygous 50333964 12 44249662 44249663 C T 8 INTERGENIC heterozygous 50333968 12 44250090 44250091 T A 19 INTERGENIC possibly homozygous 50333970 12 44250271 44250272 T C 14 INTERGENIC homozygous 50333972 12 44250940 44250941 G A 14 INTERGENIC possibly homozygous 50333974 12 44251694 44251695 G - 1 INTERGENIC homozygous 50212512 12 44255851 44255852 T C 5 INTERGENIC heterozygous 50333982 12 44256611 44256612 A T 9 INTERGENIC heterozygous 50333984 12 44258241 44258242 T A 2 INTERGENIC homozygous 50333996 12 44258519 44258520 T C 14 INTERGENIC possibly homozygous 50334000 12 44258614 44258615 G - 4 INTERGENIC homozygous 50212515 12 44259576 44259577 T TA 1 INTERGENIC homozygous 50334002 12 44260012 44260013 A AC 10 INTERGENIC homozygous 50334004 12 44261138 44261139 T C 2 INTERGENIC homozygous 50334006 12 44261145 44261146 C T 2 INTERGENIC homozygous 50334008 12 44261197 44261198 T G 9 INTERGENIC heterozygous 50334010 12 44261259 44261260 A G 8 INTERGENIC homozygous 50334012 12 44261771 44261833 GACCCACTGTGTGCATTCAGCAGTGCTGCCTGACCCACTGTGTGCATTCAGCAGTGCTGCCC -------------------------------------------------------------- 16 INTERGENIC heterozygous 50674342 12 44261877 44261878 A G 3 INTERGENIC homozygous 50334014 12 44261880 44261881 T C 3 INTERGENIC homozygous 50334016 12 44261940 44261941 A G 5 INTERGENIC homozygous 50334018 12 44261979 44261980 C G 9 INTERGENIC homozygous 50334020 12 44262865 44262866 C T 16 INTERGENIC possibly homozygous 50334022 12 44263220 44263221 G A 12 INTERGENIC homozygous 50334024 12 44263453 44263454 C T 12 INTERGENIC homozygous 50334032 12 44263802 44263803 T C 12 INTERGENIC homozygous 50334034 12 44263903 44263904 C T 7 INTERGENIC possibly homozygous 50334036 12 44263909 44263910 C A 4 INTERGENIC homozygous 50334038 12 44263924 44263954 AGAAGAGAAGAGAAGAGAAGAGAAGAGAAG ------------------------------ 1 INTERGENIC homozygous 50544958 12 44263996 44263997 A G 5 INTERGENIC homozygous 50334049 12 44264086 44264087 A AGAG 3 INTERGENIC heterozygous 50334051 12 44264088 44264089 A AGGG 3 INTERGENIC heterozygous 50334053 12 44264562 44264563 A G 3 INTERGENIC heterozygous 50334060 12 44264699 44264700 G T 1 INTERGENIC homozygous 50334067 12 44264713 44264714 C T 1 INTERGENIC homozygous 50334069 12 44265452 44265453 C T 12 INTERGENIC possibly homozygous 50334071 12 44266114 44266115 A G 13 INTERGENIC homozygous 50334073 12 44267109 44267110 C T 3 INTERGENIC homozygous 50334075 12 44267663 44267664 A G 10 INTERGENIC homozygous 50334083 12 44267697 44267698 A - 6 INTERGENIC homozygous 50334085 12 44268240 44268241 G A 23 INTERGENIC homozygous 50334087 12 44268854 44268855 A G 18 INTERGENIC homozygous 50212520 12 44269404 44269405 T - 4 INTERGENIC heterozygous 50334089 12 44271181 44271182 T C 17 INTERGENIC homozygous 50334095 12 44271441 44271442 C G 7 INTERGENIC homozygous 50334097 12 44271955 44271956 A G 11 INTERGENIC possibly homozygous 50334099 12 44275163 44275164 G T 12 INTERGENIC homozygous 50334114 12 44276057 44276058 T C 6 INTERGENIC heterozygous 50334116 12 44276994 44276995 G A 9 INTERGENIC homozygous 50334118 12 44277677 44277678 A G 9 INTERGENIC possibly homozygous 50334120 12 44278383 44278384 T C 12 INTERGENIC homozygous 50334122 12 44279899 44279900 A C 4 INTERGENIC homozygous 50334142 12 44280647 44280648 G A 7 INTERGENIC possibly homozygous 50334144 12 44280739 44280835 TCTCTGTCTCTCCCCTCTCCCCTCTCTGTCTCTCCCCTCTCCCCTCTCTGTCTCTCCCCTCTCCCCTCTCTGTCTCTCCCCTCTCTTTCTCTCCCT ------------------------------------------------------------------------------------------------ 5 INTERGENIC heterozygous 50513002 12 44282461 44282462 A G 2 INTERGENIC homozygous 50334157 12 44282470 44282471 T C 6 INTERGENIC homozygous 50334159 12 44282732 44282733 A G 11 INTERGENIC homozygous 50334161 12 44283188 44283190 CA -- 12 INTERGENIC homozygous 50334163 12 44285176 44285177 A G 3 INTERGENIC homozygous 50334169 12 44285429 44285443 AGAGACAGAGAGAA -------------- 4 INTERGENIC heterozygous 50334171 12 44285788 44285789 T C 9 INTERGENIC homozygous 50334177 12 44286837 44286838 C T 7 INTERGENIC possibly homozygous 50334179 12 44288368 44288369 C CA 1 INTERGENIC homozygous 50334181 12 44289774 44289775 A T 5 INTERGENIC homozygous 50334185 12 44290600 44290601 C CAAAAAAACA 3 INTERGENIC heterozygous 50544974 12 44290627 44290628 C A 2 INTERGENIC heterozygous 50544975 12 44291646 44291647 C T 10 INTERGENIC heterozygous 50470055 12 44292442 44292443 C T 17 INTERGENIC homozygous 50334210 12 44293649 44293650 C G 5 INTERGENIC homozygous 50334214 12 44293728 44293730 TG -- 7 INTERGENIC homozygous 50334216 12 44296100 44296101 T C 18 INTERGENIC possibly homozygous 50334226 12 44296421 44296422 G A 13 INTERGENIC homozygous 50334228 12 44297091 44297092 T TAA 1 INTERGENIC homozygous 50334230 12 44297608 44297609 C G 1 INTERGENIC homozygous 50212537 12 44299032 44299033 G A 13 INTERGENIC possibly homozygous 50334232 12 44299421 44299423 AA -- 3 INTERGENIC homozygous 50334234 12 44300759 44300760 A C 3 INTERGENIC homozygous 50334236 12 44300764 44300765 A ACACACTCT 3 INTERGENIC homozygous 50334238 12 44300826 44300827 G A 12 INTERGENIC heterozygous 50334240 12 44301381 44301382 A G 2 INTERGENIC heterozygous 50212538 12 44301409 44301410 T TGG 1 INTERGENIC homozygous 50334244 12 44301411 44301412 G GTC 2 INTERGENIC heterozygous 50334246 12 44301778 44301779 C T 8 INTERGENIC heterozygous 50334252 12 44301943 44301944 A T 8 INTERGENIC homozygous 50334254 12 44305079 44305080 T TA 2 INTERGENIC homozygous 50212541 12 44306408 44306409 A AT 11 INTERGENIC homozygous 50334270 12 44307050 44307051 C T 2 INTERGENIC homozygous 50334280 12 44307149 44307150 G GT 6 INTERGENIC homozygous 50334282 12 44307198 44307199 T G 2 INTERGENIC homozygous 50334284 12 44307520 44307521 A G 13 INTERGENIC possibly homozygous 50334286 12 44308350 44308351 G A 14 INTERGENIC homozygous 50334288 12 44309995 44309996 A G 10 INTERGENIC homozygous 50334290 12 44311112 44311114 CA -- 7 INTERGENIC homozygous 50334294 12 44312348 44312349 T C 14 INTERGENIC homozygous 50334296 12 44313356 44313357 G - 2 INTERGENIC homozygous 50334298 12 44314121 44314122 T C 1 INTERGENIC homozygous 50334302 12 44314146 44314147 T - 2 INTERGENIC heterozygous 50334304 12 44315014 44315015 A AAC 3 INTERGENIC heterozygous 50334306 12 44315019 44315021 AC -- 3 INTERGENIC heterozygous 50544986 12 44315081 44315083 CA -- 3 INTERGENIC heterozygous 50334310 12 44315819 44315820 T C 13 INTERGENIC homozygous 50334314 12 44316871 44316872 T TG 1 INTERGENIC homozygous 50334318 12 44317481 44317482 C T 6 INTERGENIC homozygous 50334320 12 44318426 44318427 T C 21 INTERGENIC heterozygous 50334324 12 44320191 44320192 A G 16 INTERGENIC homozygous 50334330 12 44321529 44321530 C - 4 INTERGENIC homozygous 50334334 12 44322357 44322358 T TAA 2 INTERGENIC heterozygous 50334342 12 44322357 44322358 T TAAA 2 INTERGENIC heterozygous 50334344 12 44322768 44322769 T G 3 INTERGENIC heterozygous 50212543 12 44323245 44323246 G C 9 INTERGENIC possibly homozygous 50334350 12 44323361 44323362 G A 12 INTERGENIC homozygous 50212544 12 44324239 44324240 G C 11 INTERGENIC homozygous 50334354 12 44327036 44327037 T TTTG 4 GENIC heterozygous 50334358 12 44327074 44327075 T - 4 GENIC homozygous 50212549 12 44327253 44327255 CC -- 1 GENIC homozygous 50334360 12 44327958 44327959 T TA 1 GENIC homozygous 50544992 12 44328856 44328857 T G 3 GENIC homozygous 50334366 12 44329414 44329416 AC -- 4 GENIC heterozygous 50334368 12 44329595 44329596 C A 3 GENIC homozygous 50212559 12 44329652 44329658 GGGGTG ------ 1 GENIC homozygous 50334370 12 44329962 44329963 T C 3 GENIC heterozygous 50334372 12 44331345 44331346 G C 2 GENIC heterozygous 50334376 12 44332899 44332900 T TC 2 GENIC heterozygous 50212564 12 44333462 44333464 GG -- 2 GENIC heterozygous 50615631 12 44334698 44334701 TTT --- 2 GENIC homozygous 50334382 12 44335138 44335139 T C 10 GENIC homozygous 50212570 12 44336966 44336967 C T 6 GENIC homozygous 50212578 12 44336972 44336973 C T 6 GENIC homozygous 50334386 12 44337216 44337217 G A 11 GENIC possibly homozygous 50334388 12 44337826 44337827 A G 13 GENIC homozygous 50212579 12 44338057 44338058 G A 4 GENIC homozygous 50334396 12 44338299 44338300 G A 13 GENIC homozygous 50334398 12 44341808 44341809 C T 7 GENIC possibly homozygous 50212586 12 44338572 44338573 T C 9 GENIC homozygous 50334400 12 44338783 44338784 A G 9 GENIC possibly homozygous 50334402 12 44339224 44339225 G A 7 GENIC possibly homozygous 50334404 12 44340306 44340307 T TA 2 GENIC homozygous 50334406 12 44340381 44340382 G C 7 GENIC homozygous 50334408 12 44341416 44341417 C T 4 GENIC homozygous 50334414 12 44341876 44341877 A G 3 GENIC homozygous 50212587 12 44342344 44342345 C T 6 GENIC heterozygous 50334416 12 44343223 44343224 G - 3 INTERGENIC heterozygous 50545000 12 44345180 44345181 A - 5 INTERGENIC homozygous 50212604 12 44345182 44345183 A - 3 INTERGENIC homozygous 50334420 12 44345184 44345185 A C 5 INTERGENIC heterozygous 50545001 12 44345271 44345272 T TGG 6 INTERGENIC heterozygous 50334422 12 44345271 44345272 T TG 6 INTERGENIC heterozygous 50385134 12 44346863 44346864 A G 12 INTERGENIC homozygous 50212616 12 44346943 44346944 C T 6 INTERGENIC homozygous 50334424 12 44347257 44347258 G GA 5 INTERGENIC heterozygous 50212619 12 44348346 44348347 C T 1 INTERGENIC homozygous 50334426 12 44349050 44349051 T TG 2 INTERGENIC heterozygous 50334428 12 44349221 44349222 A AT 2 INTERGENIC homozygous 50334430 12 44349639 44349640 A G 19 INTERGENIC homozygous 50334432 12 44350498 44350499 G A 4 INTERGENIC homozygous 50334434 12 44350704 44350705 T A 2 INTERGENIC homozygous 50334436 12 44351458 44351459 C CA 4 INTERGENIC homozygous 50334444 12 44350846 44350847 C CT 3 INTERGENIC homozygous 50334438 12 44350968 44350969 T C 5 INTERGENIC homozygous 50334440 12 44351262 44351268 ACTCCT ------ 2 INTERGENIC homozygous 50334442 12 44351583 44351584 A G 1 INTERGENIC homozygous 50334446 12 44351699 44351700 C T 2 INTERGENIC homozygous 50334448 12 44351800 44351801 T C 4 INTERGENIC heterozygous 50385149 12 44351957 44351958 A C 4 INTERGENIC homozygous 50334450 12 44352115 44352121 AACAAC ------ 6 INTERGENIC heterozygous 50334452 12 44352426 44352427 C G 7 INTERGENIC heterozygous 50334454 12 44352460 44352461 G T 10 INTERGENIC homozygous 50334456 12 44352941 44352942 T TTTTG 1 INTERGENIC homozygous 50334458 12 44353109 44353110 G A 15 INTERGENIC possibly homozygous 50334466 12 44353446 44353447 T - 7 INTERGENIC possibly homozygous 50212623 12 44353942 44353943 A AC 4 INTERGENIC homozygous 50334478 12 44354269 44354270 G A 5 INTERGENIC homozygous 50334482 12 44354391 44354392 A G 1 INTERGENIC homozygous 50334484 12 44354502 44354503 C A 1 INTERGENIC homozygous 50334486 12 44354758 44354759 C T 12 INTERGENIC possibly homozygous 50334488 12 44355310 44355311 C T 10 INTERGENIC possibly homozygous 50334490 12 44355365 44355366 C T 5 INTERGENIC homozygous 50334492 12 44355551 44355552 C G 13 INTERGENIC heterozygous 50334494 12 44355685 44355686 A - 6 INTERGENIC homozygous 50334496 12 44355868 44355869 C T 12 INTERGENIC homozygous 50334498 12 44356014 44356015 A G 14 INTERGENIC heterozygous 50334500 12 44357087 44357088 C T 6 INTERGENIC homozygous 50334514 12 44357405 44357406 C CA 1 INTERGENIC homozygous 50212637 12 44357415 44357416 T A 3 INTERGENIC homozygous 50212638 12 44357442 44357443 T C 5 INTERGENIC homozygous 50334516 12 44357602 44357603 A T 8 INTERGENIC homozygous 50334518 12 44357612 44357613 G C 6 INTERGENIC homozygous 50334520 12 44358483 44358484 T C 17 INTERGENIC homozygous 50334522 12 44358579 44358580 T C 13 INTERGENIC homozygous 50334524 12 44358875 44358997 AGAATCCCAAAGGCGGGGTTGGGGATTTAGCTCAGCGGTAGAGCGCTTGCCTAGCGAGCGCAAGGCCCTGGGTTCGGTCCCCAGCTCCGGAAAAAAAAAAAAAAAAGGAAAAAAAAGAAAAA -------------------------------------------------------------------------------------------------------------------------- 7 INTERGENIC possibly homozygous 50513008 12 44359106 44359107 A G 11 INTERGENIC homozygous 50334526 12 44359280 44359281 T TCATA 4 INTERGENIC homozygous 50334528 12 44360062 44360063 A G 2 INTERGENIC homozygous 50334531 12 44360134 44360135 G A 10 INTERGENIC homozygous 50334533 12 44361287 44361288 T C 4 INTERGENIC homozygous 50334534 12 44361481 44361482 T C 1 INTERGENIC homozygous 50334538 12 44361596 44361597 A G 5 INTERGENIC homozygous 50334540 12 44361665 44361666 A T 13 INTERGENIC possibly homozygous 50334542 12 44362041 44362043 TC -- 2 INTERGENIC homozygous 50334548 12 44362449 44362451 TC -- 1 INTERGENIC homozygous 50212651 12 44362567 44362569 TG -- 1 INTERGENIC homozygous 50212654 12 44363025 44363026 A G 4 INTERGENIC homozygous 50212662 12 44364383 44364384 A G 7 INTERGENIC possibly homozygous 50334565 12 44365751 44365752 T TGGGGG 1 GENIC homozygous 50334567 12 44366249 44366250 G A 18 GENIC possibly homozygous 50334569 12 44366573 44366574 T - 2 GENIC homozygous 50545017 12 44366955 44366956 G A 13 GENIC possibly homozygous 50334575 12 44369214 44369215 G GTA 5 INTERGENIC homozygous 50334595 12 44370719 44370720 T C 13 INTERGENIC homozygous 50334597 12 44373030 44373031 A T 9 INTERGENIC homozygous 50334599 12 44373246 44373247 C T 13 INTERGENIC homozygous 50212689 12 44373651 44373652 C T 6 INTERGENIC homozygous 50334601 12 44374209 44374217 CTTTCTTT -------- 2 INTERGENIC heterozygous 50334606 12 44374255 44374256 C - 5 INTERGENIC homozygous 50545022 12 44374288 44374289 C T 12 INTERGENIC homozygous 50334610 12 44375866 44375867 C T 15 INTERGENIC homozygous 50334612 12 44377076 44377077 G A 5 INTERGENIC homozygous 50334614 12 44378080 44378081 T - 2 INTERGENIC homozygous 50334617 12 44378656 44378657 A T 16 INTERGENIC homozygous 50334619 12 44378880 44378881 A ATT 1 INTERGENIC homozygous 50334621 12 44379169 44379170 C T 20 INTERGENIC homozygous 50334623 12 44382362 44382363 A C 3 INTERGENIC heterozygous 50334627 12 44384800 44384801 T C 5 INTERGENIC homozygous 50212697 12 44386499 44386500 T C 8 INTERGENIC possibly homozygous 50212704 12 44387127 44387128 C - 7 INTERGENIC possibly homozygous 50212706 12 44387495 44387496 C T 14 INTERGENIC possibly homozygous 50212707 12 44389880 44389881 G A 9 INTERGENIC homozygous 50212719 12 44390307 44390308 G A 23 INTERGENIC homozygous 50212720 12 44390549 44390550 G A 18 INTERGENIC homozygous 50212721 12 44391333 44391334 A AG 2 INTERGENIC homozygous 50212722 12 44391343 44391344 T C 1 INTERGENIC homozygous 50212723 12 44391580 44391581 A G 3 INTERGENIC homozygous 50212724 12 44391708 44391709 T C 16 INTERGENIC possibly homozygous 50212725 12 44392462 44392463 T TTGTG 2 INTERGENIC homozygous 50212726 12 44393051 44393052 A G 12 INTERGENIC homozygous 50212727 12 44393537 44393538 A C 12 INTERGENIC heterozygous 50334639 12 44393675 44393676 T A 15 INTERGENIC homozygous 50212728 12 44393994 44393996 AC -- 2 INTERGENIC heterozygous 50334641 12 44394120 44394121 C T 9 INTERGENIC homozygous 50212729 12 44394129 44394130 C T 5 INTERGENIC heterozygous 50212730 12 44394241 44394242 G T 10 INTERGENIC homozygous 50212731 12 44394443 44394444 A C 13 INTERGENIC heterozygous 50212732 12 44395030 44395031 T A 7 INTERGENIC homozygous 50212733 12 44398659 44398660 T C 6 INTERGENIC homozygous 50212744 12 44399228 44399229 G A 10 INTERGENIC homozygous 50212745 12 44399735 44399736 A T 3 INTERGENIC homozygous 50212746 12 44400299 44400300 C T 8 INTERGENIC homozygous 50212748 12 44400680 44400681 G T 3 INTERGENIC heterozygous 50212749 12 44402077 44402078 G A 18 INTERGENIC homozygous 50212754 12 44402198 44402199 G A 20 INTERGENIC homozygous 50212755 12 44402549 44402550 G T 11 INTERGENIC possibly homozygous 50212756 12 44402578 44402579 T C 17 INTERGENIC homozygous 50212757 12 44403321 44403323 AA -- 1 INTERGENIC homozygous 50334654 12 44405347 44405348 A AC 8 INTERGENIC homozygous 50212763 12 44403485 44403487 TG -- 6 INTERGENIC homozygous 50212759 12 44403564 44403565 G GAA 1 INTERGENIC homozygous 50212760