chr start stop reference nuc variant nuc depth genic status zygosity variant ID 12 48127680 48127681 T C 38 GENIC homozygous 50225690 12 48128064 48128065 A C 22 INTERGENIC homozygous 50225692 12 48128069 48128070 G T 21 INTERGENIC homozygous 50225694 12 48128109 48128110 C A 19 INTERGENIC homozygous 50225696 12 48128582 48128583 T A 28 INTERGENIC homozygous 50225698 12 48128603 48128604 A - 27 INTERGENIC homozygous 50225700 12 48128741 48128742 A C 38 INTERGENIC homozygous 50225702 12 48128747 48128748 C G 38 INTERGENIC homozygous 50225704 12 48128782 48128783 G A 38 INTERGENIC homozygous 50225706 12 48128787 48128788 A G 40 INTERGENIC homozygous 50225708 12 48128858 48128859 C T 38 INTERGENIC homozygous 50225710 12 48128982 48128983 G T 39 INTERGENIC homozygous 50225712 12 48128985 48128986 T C 37 INTERGENIC homozygous 50225714 12 48129029 48129030 A C 40 INTERGENIC homozygous 50225716 12 48129453 48129454 T A 49 INTERGENIC homozygous 50225718 12 48129709 48129710 G T 13 INTERGENIC homozygous 50225720 12 48129782 48129783 G GA 10 INTERGENIC heterozygous 50225724 12 48129782 48129783 G GAAAAA 10 INTERGENIC heterozygous 50546263 12 48130431 48130432 A AG 41 INTERGENIC homozygous 50225726 12 48130652 48130653 G A 37 INTERGENIC homozygous 50225728 12 48130928 48130929 C T 22 INTERGENIC homozygous 50225730 12 48131226 48131227 T C 27 INTERGENIC homozygous 50225732 12 48131834 48131835 A G 41 INTERGENIC homozygous 50225734 12 48131902 48131905 GGG --- 25 INTERGENIC homozygous 50225736 12 48131956 48131957 A C 38 INTERGENIC homozygous 50225738 12 48132629 48132630 A T 21 INTERGENIC homozygous 50225740 12 48133224 48133227 GAG --- 25 INTERGENIC homozygous 50225742 12 48133919 48133920 C T 24 INTERGENIC homozygous 50225744 12 48134101 48134102 T C 26 INTERGENIC homozygous 50225746 12 48135876 48135877 G - 7 INTERGENIC homozygous 50225749 12 48136026 48136027 C T 35 INTERGENIC homozygous 50225751 12 48136049 48136050 C T 35 INTERGENIC homozygous 50225753 12 48136268 48136269 G A 24 INTERGENIC homozygous 50225755 12 48136399 48136400 A C 31 GENIC homozygous 50225757 12 48136591 48136592 G GCACACA 27 GENIC possibly homozygous 50225759 12 48136591 48136592 G GCACA 27 GENIC heterozygous 50225761 12 48136596 48136597 T C 36 GENIC homozygous 50225763 12 48137137 48137145 CACACACA -------- 11 GENIC heterozygous 50546264 12 48137139 48137145 CACACA ------ 11 GENIC heterozygous 50559336 12 48137587 48137588 T C 6 GENIC homozygous 50225767 12 48137748 48137755 AACAGAG ------- 8 GENIC heterozygous 50546265 12 48137965 48137966 G C 32 GENIC homozygous 50225769 12 48137966 48137967 A C 31 GENIC homozygous 50225771 12 48138048 48138049 C T 31 GENIC homozygous 50225773 12 48138614 48138615 C T 36 GENIC homozygous 50225775 12 48138659 48138660 C CT 30 GENIC homozygous 50225777 12 48139304 48139305 G A 22 GENIC homozygous 50225779 12 48139562 48139563 G A 39 GENIC homozygous 50225781 12 48139750 48139751 G A 21 GENIC homozygous 50225783 12 48140276 48140277 G T 25 GENIC homozygous 50225785 12 48140404 48140405 A C 14 GENIC homozygous 50225787 12 48140424 48140441 CACACACACCACACACA ----------------- 10 GENIC possibly homozygous 50546267 12 48141296 48141297 C T 30 GENIC homozygous 50225795 12 48142051 48142052 T C 21 GENIC homozygous 50225801 12 48142148 48142150 AA -- 7 GENIC homozygous 50225803 12 48142344 48142345 T G 22 GENIC homozygous 50225805 12 48142348 48142349 T G 23 GENIC homozygous 50225807 12 48142352 48142353 T G 23 GENIC homozygous 50225809 12 48142614 48142615 A C 11 GENIC homozygous 50225811 12 48142617 48142618 A G 10 GENIC homozygous 50225813 12 48142934 48142935 T G 35 GENIC homozygous 50225815 12 48143285 48143286 A G 25 GENIC homozygous 50225817 12 48143620 48143621 A G 35 GENIC homozygous 50225825 12 48143348 48143349 A C 33 GENIC homozygous 50225819 12 48143461 48143462 A G 31 GENIC homozygous 50225821 12 48143580 48143581 T C 41 GENIC homozygous 50225823 12 48143753 48143754 G A 35 GENIC homozygous 50225827 12 48143882 48143883 A C 33 GENIC homozygous 50225829 12 48144159 48144162 TTC --- 15 GENIC homozygous 50225831 12 48144632 48144633 G GAAAA 8 GENIC heterozygous 50546268 12 48145496 48145497 T C 28 GENIC homozygous 50225841 12 48145611 48145612 A G 30 GENIC homozygous 50225843 12 48145864 48145865 A C 15 GENIC homozygous 50225845 12 48145898 48145899 C CAAA 6 GENIC homozygous 50225849 12 48145995 48145996 G GA 14 GENIC homozygous 50225851 12 48146604 48146605 T C 14 GENIC homozygous 50225853 12 48146608 48146616 TCTGCTGC -------- 20 GENIC homozygous 50225855 12 48147150 48147151 T C 11 GENIC homozygous 50225857 12 48147490 48147491 T C 26 GENIC possibly homozygous 50225859 12 48147737 48147738 G A 9 GENIC homozygous 50225861 12 48148359 48148360 T C 35 GENIC homozygous 50225863 12 48148422 48148423 T C 31 GENIC homozygous 50225865 12 48148690 48148691 A G 26 GENIC homozygous 50225867 12 48148855 48148856 C G 29 GENIC homozygous 50225869 12 48148895 48148896 G A 30 GENIC homozygous 50225871 12 48149136 48149137 C T 33 GENIC homozygous 50225873 12 48149248 48149249 G A 19 GENIC homozygous 50225875 12 48149303 48149304 T C 31 GENIC homozygous 50225877 12 48149532 48149533 G GA 27 GENIC homozygous 50225879 12 48150019 48150020 T A 37 GENIC homozygous 50225880 12 48150120 48150125 AAAAA ----- 24 GENIC possibly homozygous 50413398 12 48150193 48150194 T G 41 GENIC homozygous 50225882 12 48150384 48150385 T G 38 GENIC homozygous 50225884 12 48150865 48150866 A G 32 GENIC homozygous 50225886 12 48151562 48151563 A G 21 GENIC homozygous 50225888 12 48151583 48151584 C T 23 GENIC homozygous 50225890 12 48154013 48154014 C CAAAAAA 3 GENIC homozygous 50546270 12 48154393 48154394 C T 24 GENIC homozygous 50225898 12 48155011 48155012 A G 24 GENIC homozygous 50225900 12 48157035 48157036 T C 40 GENIC homozygous 50225934 12 48158679 48158680 G C 33 GENIC homozygous 50225936 12 48159284 48159285 T - 21 GENIC homozygous 50455714 12 48160975 48160976 T TA 11 GENIC heterozygous 50225938 12 48160976 48160977 A - 11 GENIC heterozygous 50575260 12 48161468 48161469 A G 35 GENIC homozygous 50225940 12 48162066 48162067 T C 35 GENIC homozygous 50225942 12 48162607 48162608 T C 15 GENIC homozygous 50225946 12 48163882 48163883 T C 37 GENIC homozygous 50225948 12 48165952 48165953 C CT 27 GENIC homozygous 50225950 12 48166539 48166540 G A 25 GENIC homozygous 50225952 12 48167558 48167559 T C 24 GENIC homozygous 50225954 12 48167936 48167937 A G 32 GENIC homozygous 50225956 12 48168044 48168048 CACA ---- 17 GENIC homozygous 50225958 12 48168525 48168526 C T 42 GENIC homozygous 50225960 12 48168603 48168604 T G 33 GENIC homozygous 50225962 12 48168986 48168987 C T 24 GENIC homozygous 50225964 12 48169059 48169060 A AT 22 GENIC homozygous 50225966 12 48169080 48169081 A AG 25 GENIC homozygous 50225968 12 48169653 48169654 C - 19 GENIC heterozygous 50575262 12 48169719 48169720 C T 22 GENIC homozygous 50225970 12 48169824 48169825 C T 33 GENIC homozygous 50225972 12 48170306 48170307 T C 32 GENIC homozygous 50225974 12 48170663 48170664 G A 26 GENIC homozygous 50225976 12 48170955 48170956 G A 31 GENIC homozygous 50225978 12 48170976 48170977 T C 37 GENIC homozygous 50225980 12 48171871 48171872 T G 25 GENIC homozygous 50225982 12 48173005 48173006 G A 15 GENIC homozygous 50225984 12 48173844 48173845 G A 26 GENIC homozygous 50225986 12 48173932 48173933 T - 24 GENIC homozygous 50225988 12 48174289 48174290 A G 31 GENIC homozygous 50225990 12 48174428 48174429 C T 30 GENIC homozygous 50225992 12 48175060 48175061 C T 60 GENIC homozygous 50225996 12 48175061 48175062 A G 59 GENIC homozygous 50225998 12 48175063 48175064 A G 57 GENIC homozygous 50226000 12 48175079 48175080 G C 59 GENIC homozygous 50226002 12 48175084 48175085 T - 62 GENIC homozygous 50226004 12 48175085 48175086 G C 62 GENIC homozygous 50513577 12 48175157 48175158 T C 84 GENIC homozygous 50226005 12 48175158 48175159 G A 85 GENIC homozygous 50226007 12 48179673 48179674 G C 28 GENIC homozygous 50226009 12 48179899 48179909 AGGGAGAGCC ---------- 14 GENIC homozygous 50575264 12 48180118 48180122 ACAC ---- 7 GENIC heterozygous 50575265 12 48181191 48181192 G A 31 GENIC homozygous 50226015 12 48184260 48184268 AAATAAAT -------- 2 GENIC homozygous 50226017 12 48187919 48187927 TGTGTGTG -------- 1 GENIC homozygous 50575267 12 48189559 48189560 A G 22 GENIC homozygous 50226031 12 48189777 48189778 G A 34 GENIC homozygous 50226033 12 48190126 48190127 A G 29 GENIC homozygous 50226035 12 48192562 48192563 G A 40 GENIC homozygous 50226037 12 48194781 48194782 C CTCTTTT 6 GENIC homozygous 50226039 12 48195052 48195053 T G 28 GENIC homozygous 50226041 12 48195297 48195298 C T 29 GENIC homozygous 50226043 12 48196557 48196563 ACACAG ------ 17 GENIC heterozygous 50575269 12 48199991 48199992 C CGT 4 GENIC heterozygous 50546276 12 48199991 48199992 C CGTGT 4 GENIC heterozygous 50575271 12 48200812 48200813 T C 24 GENIC homozygous 50226070 12 48200865 48200873 ACACACAC -------- 9 GENIC possibly homozygous 50575273 12 48201188 48201189 T C 48 GENIC homozygous 50226072 12 48202321 48202326 GGGTC ----- 31 GENIC homozygous 50226074 12 48202968 48202969 T C 20 GENIC homozygous 50226076 12 48204077 48204078 C T 32 GENIC homozygous 50226078 12 48205849 48205850 G A 35 GENIC homozygous 50226080 12 48206435 48206436 A G 32 GENIC homozygous 50226082 12 48207691 48207692 A G 12 GENIC homozygous 50226084 12 48207755 48207756 T C 4 GENIC homozygous 50226088 12 48207757 48207758 T C 4 GENIC homozygous 50226090 12 48208695 48208696 G A 27 GENIC homozygous 50226094 12 48210021 48210022 A G 24 GENIC homozygous 50226096 12 48210438 48210439 A - 20 GENIC possibly homozygous 50226098 12 48210630 48210640 CACACACACA ---------- 22 GENIC homozygous 50226100 12 48212020 48212021 G A 38 GENIC homozygous 50226102 12 48212223 48212224 A G 29 GENIC homozygous 50226104 12 48214410 48214411 C G 21 GENIC homozygous 50226106 12 48215907 48215908 T A 13 GENIC homozygous 50226112 12 48216017 48216018 A G 27 GENIC homozygous 50226114 12 48217108 48217109 G A 26 GENIC homozygous 50226116 12 48217581 48217582 T C 29 GENIC homozygous 50226118 12 48217675 48217676 G A 31 GENIC homozygous 50226120 12 48217851 48217852 A G 27 GENIC homozygous 50226122 12 48220546 48220547 A G 12 GENIC homozygous 50226130 12 48220199 48220200 T C 25 GENIC homozygous 50226124 12 48220508 48220509 T C 16 GENIC homozygous 50226126 12 48220535 48220536 C - 13 GENIC homozygous 50226128 12 48218279 48218293 CACACACACACACA -------------- 13 GENIC heterozygous 50575275 12 48218281 48218293 CACACACACACA ------------ 13 GENIC heterozygous 50575277 12 48221001 48221002 T C 17 GENIC homozygous 50226132 12 48222050 48222051 A G 15 GENIC homozygous 50226134 12 48222352 48222353 C T 32 GENIC homozygous 50226136 12 48223879 48223880 T TG 33 GENIC homozygous 50513579 12 48223881 48223882 A ATGGATGG 32 GENIC homozygous 50513581 12 48224830 48224831 G A 40 GENIC homozygous 50226142 12 48225583 48225584 T A 37 GENIC homozygous 50226144 12 48225606 48225607 T C 36 GENIC homozygous 50226146 12 48226206 48226216 AGACTGTGTA ---------- 29 GENIC homozygous 50226148 12 48226329 48226330 A G 29 GENIC homozygous 50226150 12 48226488 48226489 G A 22 GENIC homozygous 50226152 12 48226720 48226721 G GAA 6 GENIC homozygous 50226154 12 48227114 48227115 T C 39 GENIC homozygous 50226156 12 48227147 48227148 G GCACACACACA 21 GENIC heterozygous 50546283 12 48227147 48227148 G GCACACACACACA 21 GENIC heterozygous 50559338 12 48227147 48227148 G GCACACACACACACA 21 GENIC heterozygous 50575279 12 48228458 48228459 T G 31 GENIC homozygous 50226160 12 48228466 48228467 C CA 29 GENIC homozygous 50226162 12 48228531 48228532 G T 30 GENIC homozygous 50226164 12 48228642 48228643 G T 30 GENIC homozygous 50226166 12 48228697 48228698 A G 26 GENIC homozygous 50226168 12 48228877 48228887 CACACACACA ---------- 11 GENIC homozygous 50226170 12 48228948 48228950 TT -- 11 GENIC homozygous 50226177 12 48228953 48228954 T TAC 9 GENIC homozygous 50575281 12 48229280 48229281 T C 22 GENIC homozygous 50226187 12 48231371 48231372 G A 21 GENIC homozygous 50226189 12 48232113 48232114 A G 13 GENIC homozygous 50226191 12 48233050 48233051 T TG 17 GENIC homozygous 50226193 12 48233107 48233108 C T 13 GENIC homozygous 50226195 12 48233306 48233307 G A 7 GENIC homozygous 50226197 12 48233308 48233309 C A 7 GENIC homozygous 50226199 12 48235409 48235410 A G 28 GENIC homozygous 50226201 12 48235486 48235487 A G 36 GENIC homozygous 50226203 12 48236006 48236007 A G 25 GENIC homozygous 50226205 12 48236394 48236395 T C 16 GENIC homozygous 50226207 12 48236566 48236568 AA -- 4 GENIC heterozygous 50226211 12 48236589 48236592 GAG --- 20 GENIC heterozygous 50559339 12 48236591 48236592 G A 19 GENIC heterozygous 50513583 12 48238137 48238139 AC -- 18 GENIC homozygous 50226213 12 48238181 48238182 A ACACT 22 GENIC homozygous 50226215 12 48238229 48238230 A - 13 GENIC homozygous 50546289 12 48238413 48238414 T C 34 GENIC homozygous 50226221