chr start stop reference nuc variant nuc depth genic status zygosity variant ID 1 48625769 48625770 A G 33 GENIC homozygous 61862194 1 48626036 48626037 C T 58 GENIC homozygous 61862196 1 48626487 48626488 T G 28 GENIC homozygous 61862197 1 48627128 48627129 G A 31 GENIC homozygous 61862198 1 48627310 48627311 G A 14 GENIC homozygous 61862199 1 48627326 48627327 C CT 10 GENIC homozygous 62708901 1 48627451 48627452 G A 19 GENIC homozygous 62619935 1 48628089 48628090 C T 21 GENIC homozygous 61862200 1 48628266 48628267 C CTT 6 GENIC heterozygous 61862201 1 48628266 48628267 C CTTT 6 GENIC heterozygous 62619936 1 48628347 48628348 G GATTTTTGTGGTTCTCTGC 22 GENIC possibly homozygous 62619937 1 48628379 48628380 G C 16 GENIC homozygous 61862202 1 48628618 48628619 C T 61 GENIC homozygous 61862203 1 48628684 48628685 T A 29 GENIC homozygous 61862204 1 48628758 48628759 C A 51 GENIC homozygous 62619938 1 48629362 48629363 G GTCTCTC 6 GENIC homozygous 62619939 1 48631513 48631514 C CAAA 7 GENIC possibly homozygous 62708902 1 48631626 48631628 TG -- 14 GENIC homozygous 62619940 1 48631628 48631629 T C 14 GENIC homozygous 62619941 1 48631629 48631630 T TCAC 14 GENIC homozygous 62619942 1 48632648 48632649 A C 14 GENIC homozygous 62708903 1 48638399 48638400 C T 33 INTERGENIC homozygous 62619944 1 48638906 48638907 G A 19 INTERGENIC possibly homozygous 62619945 1 48640485 48640486 C T 34 INTERGENIC homozygous 62619947 1 48641236 48641237 A ATG 8 INTERGENIC heterozygous 61411192 1 48641397 48641406 GGGCAGACG --------- 36 INTERGENIC homozygous 62619948 1 48644616 48644617 T C 30 INTERGENIC homozygous 61411198 1 48644622 48644624 GG -- 22 INTERGENIC heterozygous 61411199 1 48644623 48644624 G - 22 INTERGENIC possibly homozygous 61862225 1 48645631 48645632 G T 8 INTERGENIC homozygous 61862226 1 48645665 48645666 G T 9 INTERGENIC homozygous 62619951 1 48645709 48645711 TG -- 22 INTERGENIC homozygous 62619952 1 48646278 48646279 G A 38 INTERGENIC homozygous 62619953 1 48646649 48646650 G GTGTA 33 INTERGENIC possibly homozygous 62653012 1 48641236 48641237 A ATGTG 8 INTERGENIC heterozygous 62126764 1 48644613 48644614 A C 29 INTERGENIC homozygous 60699352 1 48644680 48644681 G - 23 INTERGENIC homozygous 60699353 1 48646695 48646696 G GACACACAC 30 INTERGENIC heterozygous 61411203 1 48646695 48646696 G GACACAC 30 INTERGENIC heterozygous 62126768 1 48646695 48646696 G GACACACACAC 30 INTERGENIC heterozygous 62126769 1 48647222 48647223 C CT 54 INTERGENIC homozygous 62708904 1 48649066 48649067 C T 27 INTERGENIC homozygous 62708905 1 48649391 48649392 T A 25 INTERGENIC homozygous 62708906 1 48649754 48649755 A G 42 INTERGENIC homozygous 62708907 1 48650329 48650330 T C 22 INTERGENIC homozygous 61411209 1 48650435 48650447 GAGAGAGAGAGA ------------ 11 INTERGENIC homozygous 62708908 1 48650537 48650538 T C 15 INTERGENIC homozygous 61411211 1 48650564 48650565 C T 15 INTERGENIC homozygous 61411212 1 48650627 48650628 G A 21 INTERGENIC homozygous 61411213 1 48650974 48650975 C T 47 INTERGENIC homozygous 61411214 1 48651026 48651027 A T 37 INTERGENIC homozygous 61411215 1 48651206 48651207 C T 47 INTERGENIC homozygous 61411216 1 48651271 48651272 T C 50 INTERGENIC homozygous 61411217 1 48651680 48651681 A G 29 INTERGENIC homozygous 61411219 1 48651791 48651792 A G 19 INTERGENIC homozygous 61411220 1 48651822 48651823 C T 22 INTERGENIC homozygous 61411221 1 48651946 48651947 C T 24 INTERGENIC homozygous 61411222 1 48651978 48651979 A G 21 INTERGENIC homozygous 61411223 1 48652087 48652088 A G 42 INTERGENIC homozygous 61411224 1 48652141 48652142 G A 29 INTERGENIC homozygous 61411225 1 48652175 48652176 C A 33 INTERGENIC homozygous 61411226 1 48652360 48652361 T TCAAA 41 INTERGENIC homozygous 61411227 1 48652395 48652396 G GGCAGGCAGGCA 17 INTERGENIC homozygous 62126771 1 48652650 48652651 T TTAAAAATCTCAACTAAAAAAAAA 7 INTERGENIC homozygous 62126772 1 48652903 48652904 G C 18 INTERGENIC homozygous 61411229 1 48652904 48652905 G A 17 INTERGENIC homozygous 61411230 1 48653075 48653076 T TAC 1 INTERGENIC homozygous 62244574 1 48653129 48653130 G A 18 INTERGENIC homozygous 61411233 1 48653164 48653165 G C 19 INTERGENIC homozygous 61411234 1 48653304 48653305 A G 46 INTERGENIC homozygous 61862231 1 48653345 48653346 T C 54 INTERGENIC homozygous 61411235 1 48653407 48653408 G A 54 INTERGENIC homozygous 61862232 1 48653717 48653726 TGTTGTTGT --------- 6 INTERGENIC homozygous 62708909 1 48654024 48654025 A T 22 INTERGENIC homozygous 61862233 1 48654305 48654306 G A 33 INTERGENIC homozygous 61862234 1 48654411 48654412 G A 35 INTERGENIC homozygous 61862235 1 48654416 48654417 G A 43 INTERGENIC homozygous 61862236 1 48654552 48654553 T C 34 INTERGENIC homozygous 61862237 1 48654575 48654576 T C 36 INTERGENIC homozygous 61862238 1 48655363 48655364 A T 29 INTERGENIC homozygous 61862239 1 48655394 48655395 C T 27 INTERGENIC homozygous 61862240 1 48655966 48655967 G T 26 INTERGENIC homozygous 61862242 1 48655969 48655972 TTT --- 26 INTERGENIC homozygous 61862243 1 48655991 48655992 G T 23 INTERGENIC homozygous 61862244 1 48656575 48656576 A ATC 15 INTERGENIC homozygous 60699354 1 48656607 48656608 A AG 17 INTERGENIC homozygous 60699355 1 48656612 48656613 G GCCAGGACTA 19 INTERGENIC homozygous 60699356 1 48656615 48656616 A T 20 INTERGENIC homozygous 62126774 1 48656622 48656623 A ACC 23 INTERGENIC homozygous 60699357 1 48656629 48656630 C CAA 22 INTERGENIC homozygous 60699358 1 48656772 48656773 T C 47 INTERGENIC homozygous 61862246 1 48656891 48656892 G A 30 INTERGENIC homozygous 61862247 1 48656949 48656950 A G 59 INTERGENIC homozygous 61862248 1 48656983 48656984 T C 63 INTERGENIC homozygous 61862249 1 48657129 48657130 A G 34 INTERGENIC homozygous 61862250 1 48657344 48657345 A G 94 INTERGENIC homozygous 61862251 1 48657377 48657381 CGCG ---- 36 INTERGENIC possibly homozygous 62619957 1 48657379 48657387 CGCGCACA -------- 59 INTERGENIC heterozygous 62542714 1 48657434 48657435 C T 70 INTERGENIC homozygous 61862252 1 48657628 48657629 G A 31 INTERGENIC homozygous 61862254 1 48657673 48657674 T C 31 INTERGENIC homozygous 61862255 1 48657954 48657955 C A 53 INTERGENIC homozygous 61862256 1 48658077 48658078 T C 56 INTERGENIC homozygous 61862257 1 48658408 48658409 C T 15 INTERGENIC homozygous 61862258 1 48658618 48658619 T C 25 INTERGENIC homozygous 61862259 1 48658998 48658999 C CTGTT 26 INTERGENIC homozygous 61862261 1 48659696 48659697 A G 27 INTERGENIC homozygous 61862262 1 48659814 48659815 C T 33 INTERGENIC homozygous 61862263 1 48660251 48660252 G A 14 INTERGENIC homozygous 61862264 1 48660388 48660392 CTTC ---- 10 INTERGENIC homozygous 61862265 1 48660507 48660521 ATCTATTATCTATC -------------- 6 INTERGENIC homozygous 62619959 1 48660553 48660557 TATC ---- 13 INTERGENIC homozygous 61862268 1 48660579 48660582 TAT --- 16 INTERGENIC homozygous 62653013 1 48660601 48660602 C T 16 INTERGENIC homozygous 62708910 1 48660607 48660610 ATC --- 15 INTERGENIC homozygous 61862271 1 48660727 48660728 G A 40 INTERGENIC homozygous 61862273 1 48660746 48660747 C CCAT 40 INTERGENIC homozygous 61862274 1 48660857 48660858 A G 38 INTERGENIC homozygous 61862275 1 48660942 48660943 T C 17 INTERGENIC homozygous 61862276 1 48661045 48661046 T C 16 INTERGENIC homozygous 61862277 1 48661058 48661059 T C 17 INTERGENIC homozygous 61862278 1 48661164 48661166 TT -- 19 INTERGENIC homozygous 61862279 1 48661483 48661484 T C 55 INTERGENIC homozygous 61862280 1 48661505 48661506 C T 45 INTERGENIC homozygous 61862281 1 48661584 48661585 C T 34 INTERGENIC homozygous 61862282 1 48661675 48661676 C T 13 INTERGENIC homozygous 61862283 1 48661679 48661680 A G 12 INTERGENIC homozygous 61862284 1 48661681 48661682 G GGTGTGTGTGTGTGTGTGT 5 INTERGENIC heterozygous 62126775 1 48661934 48661935 A T 28 INTERGENIC homozygous 61862285 1 48662170 48662171 C A 18 INTERGENIC homozygous 61862286 1 48662430 48662431 A - 23 INTERGENIC homozygous 61862287 1 48663549 48663550 A G 34 INTERGENIC homozygous 61862289 1 48663629 48663630 G A 13 INTERGENIC homozygous 61862290 1 48663707 48663719 GGAACAGTCTGG ------------ 25 INTERGENIC homozygous 61862291 1 48663919 48663920 T C 24 INTERGENIC homozygous 61862292 1 48663992 48663993 A T 48 INTERGENIC homozygous 61862293 1 48664447 48664448 T TTGGATGTCC 9 INTERGENIC homozygous 61862294 1 48664601 48664603 AC -- 1 INTERGENIC homozygous 61862295 1 48664970 48664972 TG -- 74 INTERGENIC possibly homozygous 61862296 1 48666010 48666011 A G 64 INTERGENIC homozygous 61862298 1 48666475 48666476 A G 49 INTERGENIC homozygous 61862299 1 48666568 48666569 A G 67 INTERGENIC homozygous 61862300 1 48666891 48666892 A G 59 INTERGENIC homozygous 61862301 1 48667673 48667681 CTTTCTTC -------- 13 INTERGENIC homozygous 62708911 1 48669072 48669073 T C 35 INTERGENIC homozygous 62708913 1 48667828 48667830 TA -- 9 INTERGENIC homozygous 61862303 1 48668201 48668202 T TTATCTATC 8 INTERGENIC homozygous 62126778 1 48668591 48668592 A G 33 INTERGENIC homozygous 61411244 1 48668887 48668888 A AC 13 INTERGENIC homozygous 62708912 1 48668891 48668892 C A 13 INTERGENIC homozygous 61862305 1 48652949 48652964 AAAAAAGAAAAAAAG --------------- 9 INTERGENIC homozygous 62289845 1 48653443 48653444 G A 56 INTERGENIC homozygous 61696065 1 48656600 48656602 AA -- 17 INTERGENIC homozygous 62074918 1 48656606 48656607 T TCC 17 INTERGENIC homozygous 62074920 1 48669245 48669291 GAGTTGTCTCTAGAGACTCCATATGTGGCATAGATGTTTCCTTTCC ---------------------------------------------- 16 INTERGENIC homozygous 62542721 1 48669579 48669580 T TA 16 INTERGENIC homozygous 61411245 1 48669852 48669853 A G 19 INTERGENIC homozygous 61411246 1 48670265 48670266 A G 29 INTERGENIC homozygous 61411247 1 48672574 48672575 A G 30 INTERGENIC homozygous 61411248 1 48672921 48672939 AGAGAGAGAGAGAGAGAG ------------------ 4 INTERGENIC homozygous 62126780 1 48672971 48672972 A T 6 INTERGENIC homozygous 61411249 1 48673094 48673095 A G 19 INTERGENIC homozygous 61411250 1 48673136 48673137 G A 15 INTERGENIC homozygous 61411251 1 48673146 48673147 C T 13 INTERGENIC homozygous 61411252 1 48673614 48673615 T C 34 INTERGENIC homozygous 61411253 1 48674004 48674005 A G 13 INTERGENIC homozygous 61411254 1 48674082 48674083 C T 17 INTERGENIC homozygous 61411255 1 48674507 48674508 G A 46 INTERGENIC homozygous 61411256 1 48674695 48674696 C CA 11 INTERGENIC homozygous 61411257 1 48675483 48675484 T - 49 INTERGENIC homozygous 61411259 1 48675755 48675756 T C 30 INTERGENIC homozygous 61411260 1 48675981 48675982 A - 9 INTERGENIC homozygous 61411261 1 48675990 48675991 T - 8 INTERGENIC homozygous 61411262 1 48676230 48676231 T C 29 INTERGENIC homozygous 61411263 1 48676365 48676368 AAC --- 25 INTERGENIC homozygous 61411264 1 48676376 48676384 AAACAAAC -------- 15 INTERGENIC homozygous 61411265 1 48678106 48678107 T - 7 INTERGENIC homozygous 61411266 1 48678665 48678666 T TAGGGGAGGGGGGAGGGGGATGTTTGCCCGGAAACCGGGAAA 17 INTERGENIC heterozygous 62126781 1 48678846 48678847 A - 12 INTERGENIC homozygous 62619987 1 48679282 48679283 A G 41 INTERGENIC homozygous 61411268 1 48679544 48679545 A C 46 INTERGENIC homozygous 61411269 1 48679660 48679661 T C 40 INTERGENIC homozygous 61411270 1 48679807 48679808 C A 34 INTERGENIC possibly homozygous 61411271 1 48680038 48680039 G GCAA 32 INTERGENIC possibly homozygous 61411273 1 48680052 48680053 G A 43 INTERGENIC possibly homozygous 61411274 1 48680243 48680244 C G 30 INTERGENIC homozygous 61411275 1 48680247 48680259 TACTTAGAAAGC ------------ 33 INTERGENIC homozygous 61411276 1 48680307 48680308 T A 25 INTERGENIC homozygous 61862316 1 48680364 48680365 A AT 26 INTERGENIC homozygous 61411277 1 48680424 48680425 C CTCT 12 INTERGENIC homozygous 62126782 1 48680425 48680426 G GT 9 INTERGENIC heterozygous 62226149 1 48680425 48680426 G GTCT 9 INTERGENIC possibly homozygous 62126783 1 48680430 48680431 C CTCTG 15 INTERGENIC heterozygous 62126784 1 48680551 48680552 T C 28 INTERGENIC homozygous 61411281 1 48680715 48680716 C T 30 INTERGENIC homozygous 61411282 1 48682171 48682172 C T 25 INTERGENIC homozygous 61411283 1 48682336 48682337 G A 35 INTERGENIC homozygous 61411284 1 48682543 48682544 C T 26 INTERGENIC homozygous 61411285 1 48682811 48682812 T - 23 INTERGENIC homozygous 61411286 1 48682836 48682837 G A 23 INTERGENIC homozygous 61411287 1 48683124 48683125 A T 23 INTERGENIC homozygous 61411288 1 48683578 48683579 T - 7 INTERGENIC homozygous 61411289 1 48683616 48683617 A ATATTTATT 1 INTERGENIC homozygous 62126785 1 48685138 48685144 CCAGAT ------ 18 INTERGENIC homozygous 61411293 1 48683661 48683662 C G 8 INTERGENIC homozygous 61411290 1 48683913 48683915 TT -- 8 INTERGENIC homozygous 61411291 1 48684553 48684554 T C 33 INTERGENIC homozygous 61411292 1 48685216 48685217 T C 13 INTERGENIC homozygous 61411294 1 48685302 48685304 TG -- 40 INTERGENIC possibly homozygous 61411295 1 48685525 48685526 G C 34 INTERGENIC homozygous 61411297 1 48685860 48685861 G A 36 INTERGENIC homozygous 61411298 1 48685892 48685893 G A 38 INTERGENIC homozygous 61411299 1 48686280 48686281 A G 41 INTERGENIC homozygous 61411300 1 48687350 48687351 T C 12 INTERGENIC homozygous 61411301 1 48689867 48689868 A - 17 INTERGENIC possibly homozygous 61411302 1 48690352 48690382 GTGTGTGTGTGTGTGTGTGTGTGAGAGAGA ------------------------------ 32 INTERGENIC possibly homozygous 62126786 1 48691017 48691018 G A 41 INTERGENIC homozygous 61411306 1 48691031 48691033 TC -- 37 INTERGENIC homozygous 61411307 1 48692504 48692505 T - 1 INTERGENIC homozygous 62348838 1 48693337 48693338 T A 28 INTERGENIC homozygous 61411310 1 48693611 48693612 T C 15 INTERGENIC homozygous 61411311 1 48693617 48693618 C T 15 INTERGENIC homozygous 61411312 1 48694168 48694169 C T 13 INTERGENIC homozygous 61411313 1 48694260 48694261 T C 21 INTERGENIC homozygous 61411314 1 48694332 48694358 TCTTTCTGATAGTCTGATGGAAGCAA -------------------------- 12 INTERGENIC homozygous 61411315 1 48695344 48695345 C A 52 INTERGENIC homozygous 61411316 1 48696192 48696193 T C 30 INTERGENIC homozygous 61411317 1 48697064 48697074 TCTCTCTCTT ---------- 18 INTERGENIC homozygous 62126791 1 48697198 48697199 A G 33 INTERGENIC homozygous 61411318 1 48698153 48698154 T C 33 INTERGENIC homozygous 61411319 1 48698712 48698713 C CT 3 INTERGENIC heterozygous 62126792 1 48698848 48698849 T C 31 INTERGENIC homozygous 61411320 1 48699499 48699500 G A 27 INTERGENIC homozygous 61411321 1 48699756 48699757 G - 31 INTERGENIC homozygous 61411322 1 48700884 48700885 T TTC 10 INTERGENIC heterozygous 61411323 1 48700987 48700988 T TGACG 18 INTERGENIC homozygous 61411325 1 48701553 48701554 C T 48 INTERGENIC homozygous 61411326 1 48702623 48702624 G T 42 INTERGENIC homozygous 61411328 1 48702907 48702909 TT -- 6 INTERGENIC heterozygous 61411329 1 48702908 48702909 T - 6 INTERGENIC heterozygous 61411330 1 48703363 48703367 AAAC ---- 17 INTERGENIC homozygous 62407262 1 48703443 48703444 C A 26 INTERGENIC homozygous 62620003 1 48703675 48703676 C A 64 INTERGENIC homozygous 62708914 1 48703676 48703677 C A 67 INTERGENIC homozygous 62708915 1 48704333 48704334 C T 30 INTERGENIC homozygous 62708916 1 48705588 48705589 T TAAGTGTTACAGCTCC 17 INTERGENIC heterozygous 62126793 1 48705755 48705761 CTTGTC ------ 3 INTERGENIC homozygous 61696069 1 48706007 48706008 T C 35 INTERGENIC homozygous 61411334 1 48706654 48706655 A G 31 INTERGENIC homozygous 61411338 1 48706848 48706849 G A 25 INTERGENIC homozygous 62708917 1 48706874 48706875 C T 31 INTERGENIC homozygous 62708918 1 48706954 48706955 G GA 27 INTERGENIC homozygous 62620006 1 48707162 48707163 T C 41 INTERGENIC homozygous 61411342 1 48707166 48707167 C T 43 INTERGENIC homozygous 62620007 1 48707721 48707722 T C 37 INTERGENIC homozygous 61411343 1 48708682 48708683 T C 20 INTERGENIC homozygous 61411345 1 48708727 48708728 T C 19 INTERGENIC homozygous 61411346 1 48708831 48708832 G A 17 INTERGENIC homozygous 61862326 1 48708980 48708981 T G 23 INTERGENIC homozygous 61411348 1 48709074 48709081 TTTTTTT ------- 8 INTERGENIC homozygous 61862327 1 48709160 48709161 A G 19 INTERGENIC homozygous 62708919 1 48709298 48709299 G GT 24 INTERGENIC homozygous 61862328 1 48709943 48709944 A AGT 11 INTERGENIC heterozygous 62467605