chr	start	stop	reference nuc	variant nuc	depth	genic status	zygosity	variant ID
1	48642069	48642070	C	T	41	INTERGENIC	possibly homozygous	62534560
1	48643599	48643600	T	G	14	INTERGENIC	heterozygous	61411195
1	48644613	48644614	A	C	4	INTERGENIC	heterozygous	60699352
1	48644616	48644617	T	C	4	INTERGENIC	heterozygous	61411198
1	48644623	48644624	G	-	5	INTERGENIC	heterozygous	61862225
1	48644680	48644681	G	-	2	INTERGENIC	heterozygous	60699353
1	48644715	48644733	AAGGAAGAGGAGGAGGAA	------------------	5	INTERGENIC	homozygous	62534561
1	48645625	48645626	T	G	6	INTERGENIC	heterozygous	61411200
1	48646571	48646572	G	T	24	INTERGENIC	heterozygous	61411202
1	48647134	48647135	C	T	13	INTERGENIC	homozygous	61411205
1	48649622	48649623	C	T	30	INTERGENIC	possibly homozygous	61411208
1	48650329	48650330	T	C	21	INTERGENIC	possibly homozygous	61411209
1	48650537	48650538	T	C	7	INTERGENIC	homozygous	61411211
1	48650564	48650565	C	T	12	INTERGENIC	homozygous	61411212
1	48650627	48650628	G	A	3	INTERGENIC	homozygous	61411213
1	48650643	48650644	T	C	8	INTERGENIC	homozygous	62534562
1	48650860	48650861	C	T	21	INTERGENIC	possibly homozygous	62534563
1	48650974	48650975	C	T	24	INTERGENIC	possibly homozygous	61411214
1	48651026	48651027	A	T	14	INTERGENIC	homozygous	61411215
1	48651033	48651034	T	C	10	INTERGENIC	homozygous	62534564
1	48651114	48651115	G	A	22	INTERGENIC	homozygous	62534565
1	48651271	48651272	T	C	22	INTERGENIC	heterozygous	61411217
1	48652210	48652211	A	C	14	INTERGENIC	heterozygous	62534566
1	48652365	48652366	C	G	15	INTERGENIC	homozygous	62534567
1	48652405	48652406	C	CAGGCAGGA	6	INTERGENIC	homozygous	62534568
1	48652733	48652734	C	T	11	INTERGENIC	homozygous	62534569
1	48652957	48652964	AAAAAAG	-------	3	INTERGENIC	heterozygous	62534570
1	48653164	48653165	G	C	11	INTERGENIC	homozygous	61411234
1	48653304	48653305	A	G	14	INTERGENIC	homozygous	61862231
1	48653345	48653346	T	C	12	INTERGENIC	homozygous	61411235
1	48654024	48654025	A	T	13	INTERGENIC	possibly homozygous	61862233
1	48654305	48654306	G	A	33	INTERGENIC	homozygous	61862234
1	48654411	48654412	G	A	13	INTERGENIC	homozygous	61862235
1	48654416	48654417	G	A	11	INTERGENIC	homozygous	61862236
1	48654552	48654553	T	C	25	INTERGENIC	possibly homozygous	61862237
1	48654575	48654576	T	C	24	INTERGENIC	homozygous	61862238
1	48655363	48655364	A	T	19	INTERGENIC	heterozygous	61862239
1	48655394	48655395	C	T	19	INTERGENIC	possibly homozygous	61862240
1	48655966	48655967	G	T	8	INTERGENIC	homozygous	61862242
1	48655969	48655972	TTT	---	8	INTERGENIC	homozygous	61862243
1	48656575	48656576	A	ATC	12	INTERGENIC	homozygous	60699354
1	48656622	48656623	A	ACC	2	INTERGENIC	homozygous	60699357
1	48656629	48656630	C	CAA	4	INTERGENIC	heterozygous	60699358
1	48656772	48656773	T	C	23	INTERGENIC	possibly homozygous	61862246
1	48656891	48656892	G	A	27	INTERGENIC	possibly homozygous	61862247
1	48656949	48656950	A	G	24	INTERGENIC	possibly homozygous	61862248
1	48656983	48656984	T	C	15	INTERGENIC	homozygous	61862249
1	48657129	48657130	A	G	29	INTERGENIC	homozygous	61862250
1	48657344	48657345	A	G	6	INTERGENIC	heterozygous	61862251
1	48657434	48657435	C	T	17	INTERGENIC	homozygous	61862252
1	48657628	48657629	G	A	23	INTERGENIC	homozygous	61862254
1	48657655	48657656	T	G	18	INTERGENIC	homozygous	62534571
1	48657673	48657674	T	C	20	INTERGENIC	homozygous	61862255
1	48657954	48657955	C	A	15	INTERGENIC	possibly homozygous	61862256
1	48658077	48658078	T	C	20	INTERGENIC	homozygous	61862257
1	48658408	48658409	C	T	19	INTERGENIC	possibly homozygous	61862258
1	48658618	48658619	T	C	28	INTERGENIC	homozygous	61862259
1	48658998	48658999	C	CTGTT	5	INTERGENIC	homozygous	61862261
1	48659154	48659155	C	T	13	INTERGENIC	homozygous	62534572
1	48659578	48659579	C	T	23	INTERGENIC	possibly homozygous	62534573
1	48659696	48659697	A	G	22	INTERGENIC	possibly homozygous	61862262
1	48659814	48659815	C	T	21	INTERGENIC	possibly homozygous	61862263
1	48660251	48660252	G	A	16	INTERGENIC	homozygous	61862264
1	48660388	48660392	CTTC	----	3	INTERGENIC	homozygous	61862265
1	48660727	48660728	G	A	10	INTERGENIC	possibly homozygous	61862273
1	48660746	48660747	C	CCAT	8	INTERGENIC	possibly homozygous	61862274
1	48660857	48660858	A	G	24	INTERGENIC	homozygous	61862275
1	48660942	48660943	T	C	16	INTERGENIC	possibly homozygous	61862276
1	48661045	48661046	T	C	16	INTERGENIC	homozygous	61862277
1	48661058	48661059	T	C	11	INTERGENIC	homozygous	61862278
1	48661135	48661136	A	G	20	INTERGENIC	possibly homozygous	62534574
1	48661164	48661166	TT	--	3	INTERGENIC	homozygous	61862279
1	48661357	48661358	G	A	20	INTERGENIC	possibly homozygous	62534575
1	48661483	48661484	T	C	12	INTERGENIC	homozygous	61862280
1	48661505	48661506	C	T	14	INTERGENIC	homozygous	61862281
1	48661584	48661585	C	T	15	INTERGENIC	homozygous	61862282
1	48661934	48661935	A	T	11	INTERGENIC	heterozygous	61862285
1	48662170	48662171	C	A	19	INTERGENIC	homozygous	61862286
1	48662430	48662431	A	-	7	INTERGENIC	homozygous	61862287
1	48663549	48663550	A	G	15	INTERGENIC	possibly homozygous	61862289
1	48663629	48663630	G	A	11	INTERGENIC	possibly homozygous	61862290
1	48663702	48663703	T	A	4	INTERGENIC	homozygous	62534576
1	48663707	48663719	GGAACAGTCTGG	------------	5	INTERGENIC	homozygous	61862291
1	48663919	48663920	T	C	25	INTERGENIC	homozygous	61862292
1	48663992	48663993	A	T	17	INTERGENIC	homozygous	61862293
1	48664447	48664448	T	TTGGATGTCC	3	INTERGENIC	homozygous	61862294
1	48664970	48664972	TG	--	14	INTERGENIC	heterozygous	61862296
1	48665812	48665813	G	A	22	INTERGENIC	possibly homozygous	62534577
1	48666010	48666011	A	G	25	INTERGENIC	homozygous	61862298
1	48666475	48666476	A	G	20	INTERGENIC	homozygous	61862299
1	48670265	48670266	A	G	21	INTERGENIC	possibly homozygous	61411247
1	48666568	48666569	A	G	17	INTERGENIC	possibly homozygous	61862300
1	48666891	48666892	A	G	25	INTERGENIC	homozygous	61862301
1	48667641	48667642	C	G	11	INTERGENIC	homozygous	62534578
1	48668591	48668592	A	G	21	INTERGENIC	possibly homozygous	61411244
1	48668894	48668895	A	AAAC	4	INTERGENIC	heterozygous	62534579
1	48656600	48656602	AA	--	2	INTERGENIC	homozygous	62074918
1	48656606	48656607	T	TCC	1	INTERGENIC	homozygous	62074920
1	48671467	48671468	T	G	15	INTERGENIC	possibly homozygous	62534580
1	48671523	48671524	C	T	26	INTERGENIC	possibly homozygous	62534581
1	48672096	48672097	G	A	23	INTERGENIC	possibly homozygous	62534582
1	48672182	48672183	C	T	17	INTERGENIC	homozygous	62534583
1	48672574	48672575	A	G	26	INTERGENIC	possibly homozygous	61411248
1	48673136	48673137	G	A	15	INTERGENIC	possibly homozygous	61411251
1	48676133	48676134	G	T	1	INTERGENIC	homozygous	62534584
1	48676376	48676384	AAACAAAC	--------	1	INTERGENIC	homozygous	61411265
1	48677322	48677323	G	A	1	INTERGENIC	homozygous	62534585
1	48678084	48678237	CTTGGTTCATTTTTTCTATTCTTTTTTTTTTTTTCTATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGAGCTGGGGACCGAACCCAGGGCCTTGCGCTTGCTAGGCAAGCGCTCTACCACTGAACCAAATCCCCAAC	---------------------------------------------------------------------------------------------------------------------------------------------------------	24	INTERGENIC	heterozygous	62074922
1	48679206	48679207	A	G	22	INTERGENIC	possibly homozygous	62534586
1	48679807	48679808	C	A	18	INTERGENIC	possibly homozygous	61411271
1	48679956	48679957	T	C	23	INTERGENIC	homozygous	62534587
1	48680037	48680039	AG	--	13	INTERGENIC	possibly homozygous	61411272
1	48680189	48680190	T	A	24	INTERGENIC	homozygous	62534588
1	48680715	48680716	C	T	16	INTERGENIC	homozygous	61411282
1	48682171	48682172	C	T	15	INTERGENIC	heterozygous	61411283
1	48682336	48682337	G	A	2	INTERGENIC	homozygous	61411284
1	48682543	48682544	C	T	18	INTERGENIC	homozygous	61411285
1	48682811	48682812	T	-	19	INTERGENIC	possibly homozygous	61411286
1	48683124	48683125	A	T	22	INTERGENIC	possibly homozygous	61411288
1	48683661	48683662	C	G	5	INTERGENIC	homozygous	61411290
1	48683774	48683775	G	C	1	INTERGENIC	homozygous	62534589
1	48683890	48683891	G	A	6	INTERGENIC	homozygous	61862319
1	48683914	48683915	T	-	1	INTERGENIC	homozygous	61290490
1	48684553	48684554	T	C	3	INTERGENIC	heterozygous	61411292
1	48685138	48685144	CCAGAT	------	4	INTERGENIC	homozygous	61411293
1	48685216	48685217	T	C	13	INTERGENIC	homozygous	61411294
1	48685302	48685304	TG	--	2	INTERGENIC	heterozygous	61411295
1	48685525	48685526	G	C	21	INTERGENIC	heterozygous	61411297
1	48685860	48685861	G	A	26	INTERGENIC	homozygous	61411298
1	48686280	48686281	A	G	29	INTERGENIC	homozygous	61411300
1	48687350	48687351	T	C	4	INTERGENIC	homozygous	61411301
1	48690489	48690490	C	T	15	INTERGENIC	homozygous	61862320
1	48691017	48691018	G	A	15	INTERGENIC	homozygous	61411306
1	48691031	48691033	TC	--	12	INTERGENIC	homozygous	61411307
1	48693337	48693338	T	A	9	INTERGENIC	homozygous	61411310
1	48693611	48693612	T	C	12	INTERGENIC	homozygous	61411311
1	48694260	48694261	T	C	16	INTERGENIC	homozygous	61411314
1	48694332	48694358	TCTTTCTGATAGTCTGATGGAAGCAA	--------------------------	6	INTERGENIC	homozygous	61411315
1	48696192	48696193	T	C	7	INTERGENIC	heterozygous	61411317
1	48697064	48697074	TCTCTCTCTT	----------	14	INTERGENIC	possibly homozygous	62126791
1	48697198	48697199	A	G	14	INTERGENIC	homozygous	61411318
1	48698153	48698154	T	C	7	INTERGENIC	homozygous	61411319
1	48698848	48698849	T	C	24	INTERGENIC	homozygous	61411320
1	48699499	48699500	G	A	2	INTERGENIC	heterozygous	61411321
1	48699600	48699601	C	T	26	INTERGENIC	homozygous	61862321
1	48699756	48699757	G	-	6	INTERGENIC	homozygous	61411322
1	48701553	48701554	C	T	20	INTERGENIC	possibly homozygous	61411326
1	48701832	48701833	C	A	23	INTERGENIC	possibly homozygous	61862322
1	48702238	48702239	T	C	23	INTERGENIC	possibly homozygous	61862323
1	48702623	48702624	G	T	7	INTERGENIC	homozygous	61411328
1	48704463	48704464	C	T	15	INTERGENIC	possibly homozygous	61862324
1	48706007	48706008	T	C	16	INTERGENIC	homozygous	61411334
1	48706167	48706168	G	A	20	INTERGENIC	possibly homozygous	61411335
1	48706431	48706432	C	A	10	INTERGENIC	possibly homozygous	61411337
1	48706654	48706655	A	G	20	INTERGENIC	homozygous	61411338
1	48706804	48706805	T	A	2	INTERGENIC	homozygous	61411340
1	48706856	48706857	A	T	12	INTERGENIC	possibly homozygous	61411341
1	48707162	48707163	T	C	17	INTERGENIC	heterozygous	61411342
1	48707721	48707722	T	C	16	INTERGENIC	possibly homozygous	61411343
1	48708682	48708683	T	C	23	INTERGENIC	possibly homozygous	61411345
1	48708727	48708728	T	C	11	INTERGENIC	possibly homozygous	61411346
1	48708831	48708832	G	A	11	INTERGENIC	homozygous	61862326
1	48708980	48708981	T	G	12	INTERGENIC	homozygous	61411348
1	48709074	48709081	TTTTTTT	-------	1	INTERGENIC	homozygous	61862327
1	48709298	48709299	G	GT	22	INTERGENIC	homozygous	61862328
1	48709874	48709875	G	A	13	INTERGENIC	possibly homozygous	61862329