chr start stop reference nuc variant nuc depth genic status zygosity variant ID 1 41608472 41608473 G C 21 INTERGENIC homozygous 61987493 1 41609876 41609877 T C 26 INTERGENIC homozygous 61987494 1 41610443 41610444 A G 22 INTERGENIC homozygous 61987495 1 41612087 41612088 A G 28 INTERGENIC homozygous 61987496 1 41612152 41612153 G C 32 INTERGENIC homozygous 61987497 1 41612432 41612433 G A 23 INTERGENIC homozygous 61987498 1 41613061 41613062 G A 27 INTERGENIC homozygous 61987499 1 41613445 41613449 GTGT ---- 3 INTERGENIC homozygous 61987500 1 41613769 41613770 C - 22 INTERGENIC homozygous 60693995 1 41613773 41613774 C T 22 INTERGENIC homozygous 60693996 1 41613776 41613777 C G 21 INTERGENIC homozygous 60693997 1 41614727 41614728 G A 24 INTERGENIC homozygous 61987501 1 41614889 41614890 A G 25 INTERGENIC homozygous 61987502 1 41616051 41616057 ACAGAG ------ 16 INTERGENIC possibly homozygous 61987503 1 41616132 41616133 G - 6 INTERGENIC heterozygous 62309226 1 41616135 41616136 G - 6 INTERGENIC heterozygous 62309227 1 41617286 41617287 A G 15 INTERGENIC possibly homozygous 61987505 1 41618304 41618305 T TGATA 11 INTERGENIC heterozygous 61987507 1 41618375 41618376 T C 23 INTERGENIC homozygous 61987508 1 41618466 41618467 T TGATA 9 INTERGENIC homozygous 61859113 1 41618875 41618876 A G 19 INTERGENIC homozygous 60693999 1 41618883 41618884 G GGAT 18 INTERGENIC homozygous 62125043 1 41617244 41617245 C - 5 INTERGENIC homozygous 62125040 1 41617252 41617253 C A 6 INTERGENIC homozygous 62125041 1 41618224 41618225 C CACACAG 3 INTERGENIC homozygous 62125042 1 41618887 41618888 G - 18 INTERGENIC homozygous 62125044 1 41618888 41618889 G A 18 INTERGENIC homozygous 62125045 1 41618893 41618894 T TC 18 INTERGENIC homozygous 60694000 1 41618901 41618902 A G 16 INTERGENIC homozygous 60694001 1 41619035 41619036 G GCT 25 INTERGENIC homozygous 60694002 1 41619843 41619844 G T 25 INTERGENIC homozygous 61859115 1 41620984 41620985 C T 8 INTERGENIC homozygous 61987509 1 41621048 41621050 CA -- 1 INTERGENIC homozygous 60694003 1 41621119 41621123 GCGT ---- 2 INTERGENIC homozygous 62125046 1 41621881 41621882 G T 19 INTERGENIC homozygous 61987514 1 41622199 41622200 T C 18 INTERGENIC homozygous 61987515 1 41623447 41623448 A AC 21 INTERGENIC homozygous 60694004 1 41623857 41623869 ATAATAATAATA ------------ 3 INTERGENIC homozygous 62125047 1 41623897 41623898 T C 6 INTERGENIC homozygous 61987516 1 41624153 41624154 A G 15 INTERGENIC homozygous 61987517 1 41624239 41624242 ATT --- 28 INTERGENIC homozygous 61987518 1 41624441 41624442 C A 18 INTERGENIC homozygous 61987519 1 41624996 41625000 TGTG ---- 9 INTERGENIC heterozygous 62125048 1 41624998 41625000 TG -- 9 INTERGENIC heterozygous 62125049 1 41625297 41625298 T G 27 INTERGENIC homozygous 61987520 1 41625386 41625387 G A 24 INTERGENIC homozygous 61987521 1 41626755 41626756 T C 19 INTERGENIC homozygous 61987522 1 41627156 41627157 C A 22 INTERGENIC possibly homozygous 61987523 1 41627460 41627464 AAAC ---- 16 INTERGENIC homozygous 61987524 1 41627508 41627509 G A 21 INTERGENIC homozygous 61987525 1 41628052 41628053 A AGAAAG 3 INTERGENIC heterozygous 62309228 1 41629429 41629430 A G 21 INTERGENIC homozygous 61987526 1 41630358 41630359 G GC 20 INTERGENIC possibly homozygous 61987527 1 41630783 41630784 T C 11 INTERGENIC homozygous 61987528 1 41632071 41632072 G GGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCA 1 INTERGENIC homozygous 62125050 1 41632748 41632749 C T 14 INTERGENIC homozygous 61987529 1 41633105 41633106 T C 28 INTERGENIC homozygous 61987530 1 41634281 41634282 G T 15 INTERGENIC homozygous 61987531 1 41634572 41634573 A C 10 INTERGENIC homozygous 61987532 1 41634652 41634668 TGTGTGTGTGTGTGTG ---------------- 10 INTERGENIC homozygous 62125051 1 41636823 41636824 A ATT 16 INTERGENIC homozygous 61987533 1 41636907 41636908 A G 13 INTERGENIC homozygous 61987534 1 41636919 41636925 AAAAGA ------ 8 INTERGENIC homozygous 62125052 1 41637268 41637269 A G 3 GENIC homozygous 61987536 1 41638109 41638110 T C 20 GENIC homozygous 61987537 1 41638372 41638373 C G 19 GENIC homozygous 61987538 1 41638411 41638412 T - 21 GENIC possibly homozygous 61404020 1 41639414 41639415 C T 18 GENIC homozygous 61987539 1 41639938 41639939 T C 16 GENIC homozygous 61987540 1 41640642 41640643 G C 14 GENIC homozygous 61987542 1 41640813 41640814 T - 20 GENIC homozygous 61987543 1 41641135 41641136 T C 22 GENIC homozygous 61987544 1 41641708 41641709 T C 18 GENIC possibly homozygous 61987546 1 41641715 41641716 T C 18 GENIC possibly homozygous 61987547 1 41642558 41642559 T C 17 GENIC homozygous 61987548 1 41645041 41645042 T C 27 GENIC homozygous 61987550 1 41645594 41645595 C T 13 GENIC homozygous 61987551 1 41645607 41645608 A G 11 GENIC homozygous 61987552 1 41647701 41647702 C T 18 GENIC possibly homozygous 61987555 1 41648088 41648089 G A 19 GENIC homozygous 61987556 1 41648545 41648546 C T 21 GENIC homozygous 61987557 1 41649512 41649513 C CT 17 GENIC homozygous 61987558 1 41650136 41650137 A AAGAG 1 GENIC homozygous 62125053 1 41650507 41650508 T TA 23 GENIC homozygous 61987560 1 41650954 41650955 A - 15 GENIC homozygous 61987561 1 41651991 41651992 A T 11 GENIC homozygous 61987562 1 41652053 41652054 A - 18 GENIC homozygous 61987563 1 41652340 41652341 C T 21 GENIC homozygous 61987564 1 41653013 41653014 C T 31 GENIC homozygous 61987565 1 41653282 41653283 A G 23 GENIC homozygous 61987566 1 41654520 41654521 C CGT 9 GENIC possibly homozygous 61693946 1 41655760 41655761 A T 20 GENIC homozygous 61987567 1 41657072 41657073 T C 21 GENIC homozygous 61987568 1 41657975 41657976 T A 18 GENIC homozygous 61987569 1 41659783 41659784 C G 14 GENIC homozygous 61987571 1 41659836 41659837 A AT 14 GENIC homozygous 61987572 1 41660384 41660385 C T 28 GENIC homozygous 61987573 1 41660795 41660796 A - 23 GENIC homozygous 61987574 1 41662642 41662643 A G 15 GENIC homozygous 61987575 1 41662687 41662688 C T 21 GENIC homozygous 61987576 1 41662882 41662883 C T 21 GENIC homozygous 61987577 1 41665799 41665800 C T 23 GENIC homozygous 61987578 1 41666031 41666032 C T 25 GENIC homozygous 61987579 1 41666093 41666094 T A 18 GENIC homozygous 61987580 1 41666351 41666352 C T 18 GENIC homozygous 61987581 1 41669912 41669913 A C 18 GENIC homozygous 61987582 1 41673399 41673400 T - 18 GENIC homozygous 61987583 1 41674029 41674030 T C 21 GENIC homozygous 61987584 1 41675416 41675417 T C 14 GENIC homozygous 61987585 1 41675446 41675447 G A 15 GENIC homozygous 61987586 1 41675592 41675593 G A 21 GENIC homozygous 61987587 1 41675674 41675675 C T 11 GENIC homozygous 61987588 1 41675729 41675730 A C 12 GENIC homozygous 61987589 1 41675827 41675828 T C 20 GENIC homozygous 61987590 1 41676064 41676065 G A 19 GENIC homozygous 61987591 1 41676217 41676218 G T 19 GENIC homozygous 61987592 1 41678351 41678352 A C 23 GENIC homozygous 61987593 1 41678353 41678354 A C 23 GENIC homozygous 61987594 1 41678585 41678586 C A 23 GENIC homozygous 61987595 1 41679569 41679570 A C 8 GENIC homozygous 61987596 1 41679588 41679589 C T 12 GENIC homozygous 61987597 1 41680224 41680225 C G 18 GENIC homozygous 61987598 1 41680347 41680348 G A 20 GENIC homozygous 61987599 1 41680362 41680363 G A 22 GENIC homozygous 61987600 1 41680763 41680764 A T 28 GENIC homozygous 61987601 1 41680880 41680881 C T 25 GENIC homozygous 61987602 1 41681179 41681180 T C 20 GENIC homozygous 61987603 1 41681599 41681600 A G 26 GENIC homozygous 61987604 1 41682658 41682659 C T 27 GENIC homozygous 61987605 1 41682896 41682897 G A 20 GENIC homozygous 61987606 1 41683774 41683775 G A 32 GENIC homozygous 61987607 1 41683919 41683920 A G 28 GENIC homozygous 61987608 1 41684398 41684399 C T 29 GENIC homozygous 61987609 1 41684723 41684724 G A 15 GENIC homozygous 61987610 1 41685082 41685083 T G 18 GENIC homozygous 61987611 1 41685214 41685215 C T 25 GENIC homozygous 61987612 1 41685515 41685516 G A 18 GENIC homozygous 61987613 1 41685636 41685637 C G 19 GENIC homozygous 61987614 1 41685936 41685937 G A 10 GENIC homozygous 61987615 1 41686093 41686094 T TGAATAAATG 19 GENIC homozygous 61987616 1 41686146 41686147 T C 27 GENIC homozygous 61987618 1 41687147 41687148 G A 16 GENIC homozygous 61987619 1 41687801 41687803 GG -- 36 GENIC homozygous 61987620 1 41688549 41688550 T A 18 GENIC homozygous 61987621 1 41690626 41690627 C A 29 GENIC homozygous 61987626 1 41689261 41689262 G A 10 GENIC homozygous 61987623 1 41689677 41689678 A G 5 GENIC homozygous 61987624 1 41690346 41690347 G A 30 GENIC homozygous 61987625 1 41632101 41632102 G GA 3 INTERGENIC homozygous 62074535 1 41671302 41671304 TG -- 30 GENIC possibly homozygous 61290103 1 41691212 41691213 A G 20 GENIC homozygous 61987627 1 41691779 41691789 GTGTGTGTGT ---------- 9 GENIC heterozygous 62125055 1 41691781 41691789 GTGTGTGT -------- 9 GENIC heterozygous 62125056 1 41692236 41692237 G A 27 GENIC homozygous 61987628 1 41693124 41693125 G A 19 GENIC homozygous 61987629 1 41694213 41694215 AC -- 4 GENIC heterozygous 62225871 1 41695229 41695230 A - 10 GENIC homozygous 61987630 1 41695463 41695465 TA -- 11 GENIC homozygous 61987631 1 41695802 41695803 C T 18 GENIC homozygous 61987632 1 41697460 41697461 A AT 17 GENIC homozygous 61987633 1 41697552 41697556 TGTG ---- 7 GENIC heterozygous 61693948 1 41697554 41697556 TG -- 7 GENIC heterozygous 62125057 1 41698422 41698423 G T 23 GENIC homozygous 61987634 1 41698921 41698922 A AGTGTGTGT 4 GENIC heterozygous 62125058 1 41699072 41699073 G GT 3 GENIC heterozygous 62125059 1 41699073 41699074 G GGGT 3 GENIC heterozygous 62125060 1 41699073 41699074 G GGTGTGTGTGTGT 3 GENIC heterozygous 62125061 1 41699477 41699478 T TG 16 GENIC homozygous 61987635 1 41699822 41699823 T A 22 GENIC homozygous 60694015 1 41699823 41699824 T A 22 GENIC homozygous 60694016 1 41699824 41699825 T G 23 GENIC homozygous 60694017 1 41699903 41699904 C A 34 GENIC homozygous 60694018 1 41699930 41699931 C A 26 GENIC homozygous 60694019 1 41699948 41699949 A AT 23 GENIC homozygous 60694020 1 41700276 41700277 C A 30 GENIC possibly homozygous 61987636 1 41700288 41700289 A AT 24 GENIC homozygous 60694021 1 41701824 41701825 G A 21 GENIC homozygous 61987637 1 41703391 41703392 G GACACACACACACAC 10 GENIC possibly homozygous 62125062 1 41703452 41703453 A C 10 GENIC homozygous 61987639 1 41704123 41704124 C A 22 GENIC homozygous 61987640 1 41704268 41704269 T - 14 GENIC homozygous 61987641 1 41704270 41704274 CCAC ---- 15 GENIC homozygous 61987642 1 41704346 41704347 T TTGTGTGTGTGTG 8 GENIC homozygous 62125063 1 41705087 41705088 A - 3 GENIC homozygous 61987643 1 41705236 41705237 C T 13 GENIC homozygous 61987644 1 41705458 41705459 T TC 20 GENIC homozygous 61987645 1 41705684 41705687 TCC --- 22 GENIC homozygous 61987646 1 41706423 41706424 C T 24 GENIC homozygous 61987647 1 41706717 41706718 G A 22 GENIC homozygous 61987648 1 41707041 41707042 G A 6 GENIC homozygous 61987649 1 41707194 41707195 C T 14 GENIC homozygous 61987650 1 41708214 41708215 A G 19 GENIC homozygous 61987651 1 41709059 41709060 C CTA 18 GENIC homozygous 61987652 1 41709061 41709062 C G 18 GENIC homozygous 62125064 1 41709065 41709066 C T 18 GENIC homozygous 62125065 1 41711560 41711561 A G 23 GENIC homozygous 61987656 1 41698922 41698924 GT -- 4 GENIC heterozygous 62324398 1 41709063 41709064 G - 18 GENIC homozygous 61987653 1 41710114 41710115 T C 25 GENIC homozygous 61987654 1 41711334 41711335 A AGT 22 GENIC homozygous 61987655 1 41712995 41712996 T TAAATGTGAGTTGTAGCATCTGCGTGTCTGCGCCTGC 6 GENIC homozygous 62125067 1 41714826 41714827 G A 17 GENIC homozygous 61987657 1 41715185 41715186 C CTG 6 GENIC heterozygous 62125068 1 41715205 41715223 CACACACACACACACACA ------------------ 3 GENIC heterozygous 61987659 1 41715207 41715223 CACACACACACACACA ---------------- 3 GENIC heterozygous 62125069 1 41716111 41716112 A G 22 GENIC homozygous 61987660 1 41716674 41716675 G A 37 GENIC homozygous 61987661 1 41716703 41716704 T C 40 GENIC homozygous 61987662 1 41717687 41717688 G C 16 GENIC homozygous 61987663 1 41717900 41717901 C T 20 GENIC homozygous 61987664 1 41717962 41717963 C T 22 GENIC homozygous 61987665 1 41718249 41718250 A G 43 GENIC homozygous 61987666 1 41719368 41719369 A G 23 GENIC homozygous 61987667 1 41719538 41719539 G A 29 GENIC homozygous 61987668 1 41719820 41719821 A G 25 GENIC homozygous 61987669 1 41726936 41726937 C A 15 GENIC homozygous 61987671 1 41727213 41727215 TT -- 38 GENIC heterozygous 60694026 1 41727213 41727214 T TTCTTTCC 33 GENIC heterozygous 62125070 1 41727217 41727218 G GGGCA 29 GENIC heterozygous 62125071 1 41727219 41727220 C CTTGCCAAAAGAGCATTTTCATGATGATTCTTAGCCTAATCAAGTTGACAGTGAAGA 30 GENIC heterozygous 62125072 1 41727327 41727328 T G 22 GENIC homozygous 61987672 1 41727933 41727934 T C 22 GENIC homozygous 61987673 1 41728956 41728957 A G 29 GENIC homozygous 61987674 1 41730026 41730027 G A 23 GENIC homozygous 61987675 1 41730027 41730028 G T 23 GENIC homozygous 61987676 1 41730183 41730184 G A 20 GENIC homozygous 61987677 1 41730326 41730327 A G 13 GENIC homozygous 61987678 1 41731558 41731559 T G 16 GENIC homozygous 61987679 1 41731751 41731752 C T 25 GENIC homozygous 61987680 1 41732930 41732931 T C 24 GENIC homozygous 61987681 1 41733037 41733038 G A 23 GENIC homozygous 61987682 1 41733210 41733211 A G 27 GENIC homozygous 61987683 1 41733272 41733278 TGTGTG ------ 2 GENIC homozygous 62125073 1 41733937 41733938 G GTTGT 17 GENIC homozygous 61987684 1 41734175 41734176 G A 27 GENIC homozygous 61987685 1 41734609 41734610 C T 12 GENIC homozygous 61987686 1 41734760 41734761 G A 18 GENIC homozygous 61987687 1 41734923 41734960 AGCCAGGCGGGCTGGAATTAGATAGAGAAGTGCTAAC ------------------------------------- 16 GENIC homozygous 61987688 1 41735639 41735640 G A 26 GENIC homozygous 61987689 1 41736405 41736406 A T 10 GENIC homozygous 61987690 1 41737255 41737261 CACACA ------ 7 GENIC heterozygous 62125074 1 41737257 41737261 CACA ---- 7 GENIC heterozygous 62125075 1 41738872 41738873 G A 17 GENIC homozygous 61987691 1 41740500 41740501 G A 25 GENIC homozygous 61987692 1 41741104 41741120 CACACACACACACACA ---------------- 15 GENIC homozygous 62125076 1 41742824 41742825 A G 27 GENIC homozygous 61987695 1 41741764 41741765 T C 14 GENIC homozygous 61987693 1 41741914 41741915 A C 20 GENIC possibly homozygous 60694030 1 41742072 41742073 G A 7 GENIC homozygous 61987694 1 41743274 41743275 A AG 20 GENIC homozygous 61987696 1 41744022 41744023 G C 24 GENIC homozygous 61987697 1 41744654 41744655 G - 11 GENIC homozygous 61987698 1 41745581 41745582 T C 21 GENIC homozygous 61987699 1 41746320 41746321 A C 5 GENIC homozygous 61987700 1 41746793 41746794 G - 24 GENIC homozygous 61987701 1 41748252 41748253 A G 28 GENIC homozygous 61987702 1 41748896 41748897 C CA 15 GENIC possibly homozygous 61665942 1 41749151 41749155 TATG ---- 9 GENIC homozygous 60694031 1 41749492 41749493 A AGTT 6 GENIC homozygous 61859117 1 41749638 41749639 A ATT 4 GENIC homozygous 62125077 1 41751851 41751852 G C 17 GENIC homozygous 61987703 1 41752924 41752926 AC -- 16 GENIC homozygous 60694033 1 41752996 41753012 AGAGAGAGAGAGAGAA ---------------- 6 GENIC heterozygous 62125078 1 41753242 41753243 A G 24 GENIC homozygous 61987704 1 41754294 41754295 A C 4 GENIC homozygous 61987705 1 41754334 41754335 C CAAA 6 GENIC heterozygous 61987706 1 41756053 41756054 A ACC 1 GENIC homozygous 62255306 1 41756057 41756063 GTAGAG ------ 1 GENIC homozygous 62255307 1 41756073 41756074 A AG 4 GENIC homozygous 62125079 1 41756090 41756091 C - 7 GENIC homozygous 60694035 1 41756096 41756097 A G 7 GENIC homozygous 60694036 1 41756100 41756101 A G 7 GENIC homozygous 60694037 1 41756102 41756103 A G 8 GENIC homozygous 60694038 1 41758074 41758075 C T 28 GENIC homozygous 61987708 1 41758862 41758863 A T 26 GENIC homozygous 61987709 1 41758905 41758906 T C 20 GENIC homozygous 61987710 1 41759932 41759933 A - 23 GENIC homozygous 61987711 1 41759934 41759935 A G 24 GENIC homozygous 62125080