chr start stop reference nuc variant nuc depth genic status zygosity variant ID 1 90825053 90825128 CTGCTGTACACCTAATTTATGGAGGCAATGTCTCTCAGTTGAATCCAGTGCTTACTTTTCAGCTCATCAAGTTAG --------------------------------------------------------------------------- 3 GENIC homozygous 62140956 1 90851236 90851237 A AGT 3 INTERGENIC heterozygous 60759343 1 90851236 90851237 A AGTGT 3 INTERGENIC heterozygous 60759345 1 90870983 90870984 T - 7 INTERGENIC heterozygous 62141017 1 90871063 90871064 A AGT 3 INTERGENIC heterozygous 60759357 1 90883592 90883593 A AATGT 18 INTERGENIC homozygous 60759364 1 90901089 90901090 T TA 5 INTERGENIC heterozygous 61464370 1 90905852 90905853 C - 12 INTERGENIC homozygous 60759374 1 90906014 90906015 G GTA 6 INTERGENIC homozygous 60759376 1 90919304 90919305 C T 22 INTERGENIC heterozygous 62085142 1 90922034 90922035 A AATAAGCCT 28 INTERGENIC homozygous 60759383 1 90926986 90926990 TCTC ---- 7 INTERGENIC heterozygous 62264397 1 90928336 90928338 CA -- 35 INTERGENIC heterozygous 60759387 1 90936169 90936170 A AGAC 27 INTERGENIC homozygous 62141120 1 90926988 90926990 TC -- 7 INTERGENIC heterozygous 62311346 1 90936735 90936736 A G 31 GENIC heterozygous 60759403 1 90936818 90936819 T C 14 GENIC heterozygous 60759411 1 90936896 90936897 T G 35 GENIC heterozygous 60759413 1 90936918 90936919 C T 40 GENIC heterozygous 60759415 1 90936943 90936944 C G 43 GENIC heterozygous 60759419 1 90936974 90936976 CG -- 40 GENIC heterozygous 60759421 1 90937145 90937146 A G 28 GENIC heterozygous 60759426 1 90937594 90937595 T TA 43 INTERGENIC heterozygous 62085143 1 90938002 90938003 A G 54 INTERGENIC heterozygous 60759434 1 90938266 90938267 T TTA 49 INTERGENIC heterozygous 62141121 1 90938270 90938273 ATG --- 50 INTERGENIC heterozygous 62141122 1 90938276 90938277 T TC 49 INTERGENIC heterozygous 60759452 1 90938299 90938300 A AACCAAGAAGAAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT 33 INTERGENIC heterozygous 62141123 1 90953461 90953462 G GTAAGGGCACCAGTGGAAGGGGAAGCCCTTGGTCCTGCCAACACTCGACCCCCAGTGAA 8 INTERGENIC homozygous 62141135 1 90954297 90954298 T - 13 INTERGENIC heterozygous 62311347 1 90989066 90989068 TC -- 23 INTERGENIC homozygous 60759471 1 90990207 90990240 TGCCATCATGTTGTCTCTGGTGTTACCTTGTTC --------------------------------- 18 INTERGENIC homozygous 62141169 1 91001134 91001135 T - 8 INTERGENIC heterozygous 62311348 1 91008744 91008745 T TCCCTC 6 INTERGENIC homozygous 60759475 1 91011334 91011335 G GCT 35 INTERGENIC heterozygous 62311349 1 91011338 91011340 CA -- 35 INTERGENIC heterozygous 62311350 1 91014004 91014005 C - 26 INTERGENIC homozygous 60759490 1 91014134 91014135 C - 17 INTERGENIC homozygous 60759492 1 91017042 91017043 C CA 25 INTERGENIC homozygous 60759494 1 91027081 91027082 T C 26 INTERGENIC homozygous 62015942 1 91037598 91037599 A - 14 INTERGENIC heterozygous 62141225 1 91041182 91041183 A ATC 8 INTERGENIC homozygous 60759504 1 91047833 91047834 A T 11 INTERGENIC homozygous 62141231 1 91047836 91047838 TG -- 17 INTERGENIC homozygous 60759512 1 91047839 91047840 G T 15 INTERGENIC homozygous 62141232 1 91047841 91047842 G T 17 INTERGENIC homozygous 62141233 1 91047843 91047844 G T 17 INTERGENIC homozygous 62141234 1 91066562 91066564 TT -- 9 INTERGENIC heterozygous 62264435 1 91078009 91078010 A AC 23 INTERGENIC heterozygous 62264442 1 91079120 91079123 TGG --- 34 INTERGENIC heterozygous 62141243 1 91083427 91083457 TCTGGTGATCAAATTCCCTCTCTTCTCTCC ------------------------------ 13 INTERGENIC homozygous 62085147 1 91085139 91085140 T - 7 INTERGENIC homozygous 62228411 1 91085896 91085897 A AG 8 INTERGENIC homozygous 62311351 1 91089775 91089776 T - 41 GENIC homozygous 61670140 1 91089921 91089922 T G 27 GENIC homozygous 60759557 1 91089943 91089944 T G 32 GENIC homozygous 60759559 1 91089945 91089946 T G 32 GENIC homozygous 60759561 1 91092676 91092680 CACA ---- 9 INTERGENIC heterozygous 62311352 1 91106292 91106293 C A 6 INTERGENIC homozygous 60759600 1 91106489 91106490 C CTGA 16 INTERGENIC homozygous 60759602 1 91107919 91107921 CG -- 38 INTERGENIC homozygous 60759604 1 91108563 91108564 A ACC 17 INTERGENIC homozygous 60759605 1 91108878 91108879 C CA 4 INTERGENIC homozygous 60759607 1 91112259 91112281 CCACTTGTGAGGCAGGGTAAGG ---------------------- 1 INTERGENIC homozygous 60759609 1 91127453 91127454 G GA 6 GENIC heterozygous 62311353 1 91127454 91127455 A - 6 GENIC heterozygous 62264462 1 91139458 91139459 G GA 5 GENIC heterozygous 62311354 1 91139459 91139460 A - 5 GENIC heterozygous 61465399 1 91150039 91150040 T TACACACAC 13 INTERGENIC heterozygous 62264474 1 91150040 91150042 AC -- 13 INTERGENIC heterozygous 60759628 1 91151358 91151362 TAGA ---- 4 INTERGENIC homozygous 62311355 1 91151561 91151562 T TGATA 10 INTERGENIC homozygous 62264481 1 91152705 91152710 CTTTG ----- 21 INTERGENIC homozygous 60759643 1 91152711 91152712 G A 21 INTERGENIC homozygous 62141294 1 91161556 91161557 C G 6 GENIC homozygous 60759647 1 91162534 91162535 T - 5 GENIC heterozygous 61888493 1 91163329 91163330 T TACAC 2 GENIC homozygous 62264488 1 91172880 91172881 T TCACTCACGGTCCAACTGGGCTTTGTGTTG 44 GENIC homozygous 60759651 1 91181908 91181909 C CG 4 INTERGENIC homozygous 62141329 1 91181909 91181910 T TGG 4 INTERGENIC homozygous 62141330 1 91181912 91181913 A ATCCCCAACCCCTGGCCTCTCGGGCCGCGCCGCCCTGACTCCCGCCCAGAACCCAGGCCCC 4 INTERGENIC homozygous 62141331 1 91182101 91182102 G GA 3 INTERGENIC heterozygous 62264503 1 91184181 91184182 G C 18 INTERGENIC homozygous 60759668 1 91184197 91184198 C T 20 INTERGENIC homozygous 60759669 1 91184198 91184199 C A 20 INTERGENIC homozygous 60759671 1 91184203 91184204 T C 18 INTERGENIC homozygous 60759673 1 91184677 91184678 A AGACCTCCTGGAACTAGAATTCCAGATGGTTGTGAGCCACCTTGAGGATGTTGG 12 INTERGENIC homozygous 62085150 1 91186654 91186655 G GACACAC 2 INTERGENIC heterozygous 62264509 1 91186655 91186657 AC -- 2 INTERGENIC heterozygous 60759675 1 91188142 91188176 TCTTAGCAATGTAACCTGTAATGATCCGAAAAGC ---------------------------------- 5 INTERGENIC homozygous 62141334 1 91188238 91188239 C G 6 INTERGENIC homozygous 60759680 1 91188241 91188242 C T 7 INTERGENIC homozygous 60759681 1 91188242 91188243 C T 7 INTERGENIC homozygous 60759683 1 91188244 91188245 C - 8 INTERGENIC homozygous 60759685 1 91188246 91188247 T G 7 INTERGENIC homozygous 62141335 1 91188254 91188255 A T 7 INTERGENIC homozygous 60759687 1 91188261 91188262 A C 7 INTERGENIC homozygous 60759688 1 91188268 91188269 T A 5 INTERGENIC homozygous 60759690 1 91188285 91188286 A AC 6 INTERGENIC homozygous 60759691 1 91188286 91188287 A T 6 INTERGENIC homozygous 62141336 1 91188288 91188289 G C 7 INTERGENIC homozygous 62141337 1 91188293 91188294 G C 7 INTERGENIC homozygous 60759693 1 91188296 91188297 T A 9 INTERGENIC homozygous 60759695 1 91188307 91188308 C T 8 INTERGENIC homozygous 60759696 1 91188313 91188314 A AC 8 INTERGENIC homozygous 60759698 1 91188319 91188320 A T 8 INTERGENIC homozygous 60759700 1 91194180 91194182 TG -- 16 GENIC heterozygous 62141339 1 91198605 91198606 C CT 7 GENIC heterozygous 62141344 1 91199547 91199549 CA -- 5 GENIC heterozygous 62311356 1 91203907 91203908 A - 5 INTERGENIC heterozygous 61465603 1 91205221 91205223 TG -- 11 INTERGENIC heterozygous 62311357 1 91228621 91228623 AC -- 13 GENIC possibly homozygous 62311358 1 91230569 91230571 AC -- 10 GENIC heterozygous 62141365 1 91232470 91232480 GTCAAAAACG ---------- 27 GENIC homozygous 60759719 1 91265510 91265512 AA -- 8 GENIC heterozygous 61465882 1 91265511 91265512 A - 8 GENIC heterozygous 60759724 1 91271589 91271590 T TGGGCAC 5 GENIC homozygous 62311359 1 91271737 91271738 A - 4 GENIC heterozygous 61465898 1 91274493 91274494 T C 8 GENIC possibly homozygous 60759726 1 91275807 91275808 G GA 6 GENIC heterozygous 62228423 1 91279070 91279071 A - 11 GENIC heterozygous 62141383 1 91280074 91280078 AGAG ---- 2 GENIC heterozygous 62311360 1 91282395 91282396 G GATTTTTTTTTTTTTTTGTTCTTTTTTTCGGAGCTGGGGACCGAACCCAGGACCTTGCGCTTCCTAGGT 8 GENIC heterozygous 62141385 1 91282395 91282396 G GATTTTTTTTTTTTTGTTCTTTTTTTCGGAGCTGGGGACCGAACCCAGGACCTTGCACTTCCTAGGT 8 GENIC possibly homozygous 62311361 1 91284304 91284305 A - 6 GENIC heterozygous 61465920 1 91284481 91284486 TTTGG ----- 5 GENIC heterozygous 60759733