chr start stop reference nuc variant nuc depth genic status zygosity variant ID 1 48629302 48629303 C CA 2 GENIC homozygous 62126763 1 48639641 48639642 T C 19 INTERGENIC homozygous 61411191 1 48641236 48641237 A ATG 6 INTERGENIC homozygous 61411192 1 48642527 48642535 AAAAAAAA -------- 10 INTERGENIC heterozygous 62126765 1 48642528 48642535 AAAAAAA ------- 10 INTERGENIC heterozygous 62126766 1 48643599 48643600 T G 21 INTERGENIC homozygous 61411195 1 48644613 48644614 A C 16 INTERGENIC homozygous 60699352 1 48644616 48644617 T C 16 INTERGENIC homozygous 61411198 1 48644622 48644624 GG -- 17 INTERGENIC homozygous 61411199 1 48644680 48644681 G - 17 INTERGENIC homozygous 60699353 1 48645625 48645626 T G 10 INTERGENIC homozygous 61411200 1 48645705 48645711 TGTGTG ------ 12 INTERGENIC homozygous 61411201 1 48646571 48646572 G T 18 INTERGENIC homozygous 61411202 1 48646650 48646662 TGTATGTATGTA ------------ 9 INTERGENIC homozygous 62126767 1 48646695 48646696 G GACACACAC 9 INTERGENIC heterozygous 61411203 1 48646695 48646696 G GACACAC 9 INTERGENIC heterozygous 62126768 1 48647134 48647135 C T 27 INTERGENIC homozygous 61411205 1 48648060 48648061 A G 21 INTERGENIC homozygous 61411206 1 48649074 48649075 T C 15 INTERGENIC homozygous 61411207 1 48649622 48649623 C T 23 INTERGENIC homozygous 61411208 1 48650329 48650330 T C 26 INTERGENIC homozygous 61411209 1 48650431 48650447 GAGAGAGAGAGAGAGA ---------------- 10 INTERGENIC homozygous 61411210 1 48650537 48650538 T C 29 INTERGENIC homozygous 61411211 1 48650564 48650565 C T 34 INTERGENIC homozygous 61411212 1 48650627 48650628 G A 24 INTERGENIC homozygous 61411213 1 48650974 48650975 C T 32 INTERGENIC homozygous 61411214 1 48651026 48651027 A T 27 INTERGENIC homozygous 61411215 1 48651206 48651207 C T 29 INTERGENIC homozygous 61411216 1 48651271 48651272 T C 22 INTERGENIC homozygous 61411217 1 48651406 48651407 C CACACACACACACCCAGAG 1 INTERGENIC homozygous 62226147 1 48651680 48651681 A G 24 INTERGENIC homozygous 61411219 1 48651791 48651792 A G 31 INTERGENIC homozygous 61411220 1 48651822 48651823 C T 25 INTERGENIC homozygous 61411221 1 48651946 48651947 C T 25 INTERGENIC homozygous 61411222 1 48651978 48651979 A G 13 INTERGENIC homozygous 61411223 1 48652087 48652088 A G 20 INTERGENIC homozygous 61411224 1 48652141 48652142 G A 17 INTERGENIC homozygous 61411225 1 48652175 48652176 C A 21 INTERGENIC homozygous 61411226 1 48652360 48652361 T TCAAA 11 INTERGENIC homozygous 61411227 1 48652395 48652396 G GGCAGGCAGGCA 3 INTERGENIC homozygous 62126771 1 48652650 48652651 T TTAAAAATCTCAACTAAAAAAAAA 6 INTERGENIC homozygous 62126772 1 48652903 48652904 G C 5 INTERGENIC homozygous 61411229 1 48652904 48652905 G A 5 INTERGENIC homozygous 61411230 1 48652961 48652964 AAG --- 4 INTERGENIC homozygous 61411232 1 48653123 48653124 C CACACA 12 INTERGENIC heterozygous 62126773 1 48653429 48653430 C T 19 INTERGENIC homozygous 61411236 1 48653129 48653130 G A 10 INTERGENIC homozygous 61411233 1 48653164 48653165 G C 9 INTERGENIC homozygous 61411234 1 48653345 48653346 T C 19 INTERGENIC homozygous 61411235 1 48653505 48653506 C T 26 INTERGENIC homozygous 61411237 1 48653571 48653572 G C 17 INTERGENIC homozygous 61411238 1 48653609 48653610 T C 16 INTERGENIC homozygous 61411239 1 48656575 48656576 A ATC 18 INTERGENIC homozygous 60699354 1 48656600 48656602 AA -- 19 INTERGENIC homozygous 62074918 1 48656606 48656607 T TCC 20 INTERGENIC homozygous 62074920 1 48656607 48656608 A AG 20 INTERGENIC homozygous 60699355 1 48656612 48656613 G GCCAGGACTA 19 INTERGENIC homozygous 60699356 1 48656615 48656616 A T 19 INTERGENIC homozygous 62126774 1 48656622 48656623 A ACC 19 INTERGENIC homozygous 60699357 1 48656629 48656630 C CAA 21 INTERGENIC homozygous 60699358 1 48661681 48661682 G GGTGTGTGTGTGTGTGTGT 6 INTERGENIC homozygous 62126775 1 48662036 48662058 GAGAGAGAGAGAGAGAGAGAGA ---------------------- 3 INTERGENIC homozygous 62126777 1 48668201 48668202 T TTATCTATCTATCTATCTATC 12 INTERGENIC homozygous 62226148 1 48668591 48668592 A G 25 INTERGENIC homozygous 61411244 1 48669579 48669580 T TA 19 INTERGENIC homozygous 61411245 1 48669852 48669853 A G 27 INTERGENIC homozygous 61411246 1 48670265 48670266 A G 38 INTERGENIC homozygous 61411247 1 48672574 48672575 A G 23 INTERGENIC homozygous 61411248 1 48672921 48672939 AGAGAGAGAGAGAGAGAG ------------------ 5 INTERGENIC homozygous 62126780 1 48672971 48672972 A T 4 INTERGENIC homozygous 61411249 1 48673094 48673095 A G 7 INTERGENIC homozygous 61411250 1 48673136 48673137 G A 7 INTERGENIC homozygous 61411251 1 48673146 48673147 C T 4 INTERGENIC homozygous 61411252 1 48673614 48673615 T C 28 INTERGENIC homozygous 61411253 1 48674004 48674005 A G 26 INTERGENIC homozygous 61411254 1 48674082 48674083 C T 33 INTERGENIC homozygous 61411255 1 48674507 48674508 G A 19 INTERGENIC homozygous 61411256 1 48674695 48674696 C CA 9 INTERGENIC homozygous 61411257 1 48675483 48675484 T - 14 INTERGENIC homozygous 61411259 1 48675755 48675756 T C 12 INTERGENIC homozygous 61411260 1 48675981 48675982 A - 8 INTERGENIC homozygous 61411261 1 48675990 48675991 T - 8 INTERGENIC homozygous 61411262 1 48676230 48676231 T C 8 INTERGENIC homozygous 61411263 1 48676365 48676368 AAC --- 15 INTERGENIC homozygous 61411264 1 48676376 48676384 AAACAAAC -------- 9 INTERGENIC homozygous 61411265 1 48678665 48678666 T TAGGGGAGGGGGGAGGGGGATGTTTGCCCGGAAACCGGGAAA 16 INTERGENIC heterozygous 62126781 1 48679282 48679283 A G 37 INTERGENIC homozygous 61411268 1 48679544 48679545 A C 23 INTERGENIC homozygous 61411269 1 48679660 48679661 T C 24 INTERGENIC homozygous 61411270 1 48679807 48679808 C A 22 INTERGENIC homozygous 61411271 1 48680038 48680039 G GCAA 17 INTERGENIC homozygous 61411273 1 48680052 48680053 G A 21 INTERGENIC homozygous 61411274 1 48680243 48680244 C G 20 INTERGENIC homozygous 61411275 1 48680247 48680259 TACTTAGAAAGC ------------ 26 INTERGENIC homozygous 61411276 1 48680364 48680365 A AT 19 INTERGENIC homozygous 61411277 1 48680424 48680425 C CTCT 10 INTERGENIC homozygous 62126782 1 48680425 48680426 G GT 11 INTERGENIC heterozygous 62226149 1 48680425 48680426 G GTCT 11 INTERGENIC possibly homozygous 62126783 1 48680430 48680431 C CTCTG 11 INTERGENIC heterozygous 62126784 1 48680551 48680552 T C 30 INTERGENIC homozygous 61411281 1 48680715 48680716 C T 21 INTERGENIC homozygous 61411282 1 48682171 48682172 C T 16 INTERGENIC homozygous 61411283 1 48682336 48682337 G A 26 INTERGENIC homozygous 61411284 1 48682543 48682544 C T 24 INTERGENIC homozygous 61411285 1 48682811 48682812 T - 25 INTERGENIC homozygous 61411286 1 48682836 48682837 G A 26 INTERGENIC homozygous 61411287 1 48683124 48683125 A T 14 INTERGENIC homozygous 61411288 1 48683578 48683579 T - 2 INTERGENIC homozygous 61411289 1 48683661 48683662 C G 1 INTERGENIC homozygous 61411290 1 48683913 48683915 TT -- 9 INTERGENIC homozygous 61411291 1 48684553 48684554 T C 13 INTERGENIC homozygous 61411292 1 48684661 48684663 CG -- 11 INTERGENIC heterozygous 62244575 1 48685138 48685144 CCAGAT ------ 14 INTERGENIC homozygous 61411293 1 48685216 48685217 T C 18 INTERGENIC homozygous 61411294 1 48685302 48685304 TG -- 15 INTERGENIC homozygous 61411295 1 48685525 48685526 G C 19 INTERGENIC homozygous 61411297 1 48685860 48685861 G A 23 INTERGENIC homozygous 61411298 1 48685892 48685893 G A 19 INTERGENIC homozygous 61411299 1 48686280 48686281 A G 24 INTERGENIC homozygous 61411300 1 48687350 48687351 T C 5 INTERGENIC homozygous 61411301 1 48689867 48689868 A - 22 INTERGENIC homozygous 61411302 1 48690352 48690382 GTGTGTGTGTGTGTGTGTGTGTGAGAGAGA ------------------------------ 12 INTERGENIC homozygous 62126786 1 48691017 48691018 G A 21 INTERGENIC homozygous 61411306 1 48691031 48691033 TC -- 18 INTERGENIC homozygous 61411307 1 48693337 48693338 T A 22 INTERGENIC homozygous 61411310 1 48693611 48693612 T C 17 INTERGENIC homozygous 61411311 1 48693617 48693618 C T 17 INTERGENIC homozygous 61411312 1 48694168 48694169 C T 10 INTERGENIC homozygous 61411313 1 48694260 48694261 T C 19 INTERGENIC homozygous 61411314 1 48694332 48694358 TCTTTCTGATAGTCTGATGGAAGCAA -------------------------- 12 INTERGENIC homozygous 61411315 1 48695344 48695345 C A 17 INTERGENIC homozygous 61411316 1 48696192 48696193 T C 15 INTERGENIC homozygous 61411317 1 48697064 48697074 TCTCTCTCTT ---------- 9 INTERGENIC heterozygous 62126791 1 48697198 48697199 A G 22 INTERGENIC homozygous 61411318 1 48698153 48698154 T C 22 INTERGENIC homozygous 61411319 1 48698712 48698713 C CT 7 INTERGENIC homozygous 62126792 1 48698848 48698849 T C 19 INTERGENIC homozygous 61411320 1 48699499 48699500 G A 24 INTERGENIC homozygous 61411321 1 48699756 48699757 G - 19 INTERGENIC homozygous 61411322 1 48700884 48700885 T TTC 8 INTERGENIC heterozygous 61411323 1 48700987 48700988 T TGACG 6 INTERGENIC homozygous 61411325 1 48701553 48701554 C T 29 INTERGENIC homozygous 61411326 1 48702561 48702562 G A 16 INTERGENIC homozygous 61411327 1 48702623 48702624 G T 10 INTERGENIC homozygous 61411328 1 48702907 48702909 TT -- 6 INTERGENIC homozygous 61411329 1 48703592 48703593 G A 12 INTERGENIC homozygous 61411331 1 48706007 48706008 T C 26 INTERGENIC homozygous 61411334 1 48706167 48706168 G A 27 INTERGENIC possibly homozygous 61411335 1 48706427 48706428 C A 9 INTERGENIC homozygous 61411336 1 48706431 48706432 C A 13 INTERGENIC homozygous 61411337 1 48706654 48706655 A G 16 INTERGENIC homozygous 61411338 1 48706790 48706791 G GAA 11 INTERGENIC heterozygous 61411339 1 48706790 48706791 G GA 11 INTERGENIC heterozygous 62126794 1 48706804 48706805 T A 18 INTERGENIC homozygous 61411340 1 48706856 48706857 A T 18 INTERGENIC homozygous 61411341 1 48708682 48708683 T C 11 INTERGENIC homozygous 61411345 1 48707162 48707163 T C 32 INTERGENIC homozygous 61411342 1 48707721 48707722 T C 17 INTERGENIC homozygous 61411343 1 48708483 48708484 T C 25 INTERGENIC homozygous 61411344 1 48708727 48708728 T C 14 INTERGENIC homozygous 61411346 1 48708963 48708964 T C 8 INTERGENIC homozygous 61411347 1 48708980 48708981 T G 9 INTERGENIC homozygous 61411348 1 48709137 48709138 G GGCCTT 13 INTERGENIC homozygous 61411349 1 48709312 48709314 GA -- 16 INTERGENIC homozygous 61411350 1 48709953 48709991 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA -------------------------------------- 19 INTERGENIC homozygous 61411351 1 48710091 48710092 C T 22 INTERGENIC homozygous 61411352 1 48710264 48710265 G A 17 INTERGENIC homozygous 61411353 1 48710584 48710604 GATTAGACACAAATGGTTCT -------------------- 14 INTERGENIC homozygous 61411354