chr	start	stop	reference nuc	variant nuc	depth	genic status	zygosity	variant ID
1	48625769	48625770	A	G	40	GENIC	possibly homozygous	61862194
1	48626036	48626037	C	T	34	GENIC	homozygous	61862196
1	48626487	48626488	T	G	40	GENIC	homozygous	61862197
1	48627128	48627129	G	A	29	GENIC	homozygous	61862198
1	48627310	48627311	G	A	21	GENIC	homozygous	61862199
1	48628089	48628090	C	T	36	GENIC	homozygous	61862200
1	48628266	48628267	C	CTT	21	GENIC	homozygous	61862201
1	48628379	48628380	G	C	21	GENIC	homozygous	61862202
1	48628618	48628619	C	T	41	GENIC	homozygous	61862203
1	48628684	48628685	T	A	42	GENIC	homozygous	61862204
1	48629362	48629363	G	GTCTC	17	GENIC	homozygous	61862205
1	48631528	48631529	C	A	31	GENIC	homozygous	61862206
1	48631576	48631577	A	C	26	GENIC	possibly homozygous	61862207
1	48631625	48631626	T	TC	20	GENIC	homozygous	61862208
1	48632645	48632646	C	CA	23	GENIC	homozygous	61411190
1	48633119	48633120	G	GGCGC	11	GENIC	homozygous	61862209
1	48633179	48633191	ACACACACACAC	------------	8	GENIC	possibly homozygous	61862210
1	48633210	48633214	ACAC	----	4	GENIC	homozygous	61666189
1	48633254	48633255	C	CTG	7	GENIC	heterozygous	61862211
1	48633255	48633256	A	AG	7	GENIC	heterozygous	61862212
1	48634286	48634287	A	G	35	GENIC	homozygous	61862213
1	48634704	48634705	A	G	28	INTERGENIC	homozygous	61862214
1	48635210	48635211	A	G	31	INTERGENIC	homozygous	61862215
1	48635378	48635379	G	C	30	INTERGENIC	homozygous	61862216
1	48635462	48635463	A	G	36	INTERGENIC	homozygous	61862217
1	48636230	48636231	A	G	32	INTERGENIC	homozygous	61862218
1	48637008	48637009	C	T	32	INTERGENIC	homozygous	61862219
1	48638264	48638265	C	T	45	INTERGENIC	homozygous	61862220
1	48639568	48639569	T	C	28	INTERGENIC	homozygous	61862221
1	48640433	48640434	G	T	31	INTERGENIC	possibly homozygous	61862222
1	48641236	48641237	A	ATG	15	INTERGENIC	possibly homozygous	61411192
1	48641647	48641648	C	T	41	INTERGENIC	homozygous	61862223
1	48642527	48642534	AAAAAAA	-------	2	INTERGENIC	heterozygous	61411193
1	48642528	48642534	AAAAAA	------	2	INTERGENIC	heterozygous	61411194
1	48643924	48643928	GAGA	----	35	INTERGENIC	homozygous	61862224
1	48644359	48644360	T	C	2	INTERGENIC	homozygous	61666190
1	48644613	48644614	A	C	25	INTERGENIC	possibly homozygous	60699352
1	48644616	48644617	T	C	23	INTERGENIC	homozygous	61411198
1	48644622	48644624	GG	--	16	INTERGENIC	heterozygous	61411199
1	48644623	48644624	G	-	16	INTERGENIC	possibly homozygous	61862225
1	48644680	48644681	G	-	21	INTERGENIC	homozygous	60699353
1	48645631	48645632	G	T	20	INTERGENIC	homozygous	61862226
1	48645707	48645711	TGTG	----	14	INTERGENIC	possibly homozygous	61862227
1	48646695	48646696	G	GACACACAC	3	INTERGENIC	homozygous	61411203
1	48648060	48648061	A	G	21	INTERGENIC	homozygous	61411206
1	48649074	48649075	T	C	39	INTERGENIC	homozygous	61411207
1	48649351	48649352	A	C	32	INTERGENIC	homozygous	61862228
1	48649361	48649362	A	-	30	INTERGENIC	homozygous	61862229
1	48649622	48649623	C	T	55	INTERGENIC	homozygous	61411208
1	48650329	48650330	T	C	24	INTERGENIC	homozygous	61411209
1	48650537	48650538	T	C	12	INTERGENIC	homozygous	61411211
1	48650564	48650565	C	T	13	INTERGENIC	homozygous	61411212
1	48650627	48650628	G	A	19	INTERGENIC	homozygous	61411213
1	48650974	48650975	C	T	20	INTERGENIC	homozygous	61411214
1	48651026	48651027	A	T	18	INTERGENIC	homozygous	61411215
1	48651271	48651272	T	C	24	INTERGENIC	homozygous	61411217
1	48651511	48651512	T	A	19	INTERGENIC	homozygous	61862230
1	48651554	48651555	T	C	21	INTERGENIC	homozygous	61411218
1	48651680	48651681	A	G	36	INTERGENIC	homozygous	61411219
1	48651791	48651792	A	G	29	INTERGENIC	homozygous	61411220
1	48651822	48651823	C	T	29	INTERGENIC	homozygous	61411221
1	48651946	48651947	C	T	30	INTERGENIC	homozygous	61411222
1	48651978	48651979	A	G	32	INTERGENIC	homozygous	61411223
1	48652087	48652088	A	G	43	INTERGENIC	homozygous	61411224
1	48652141	48652142	G	A	42	INTERGENIC	homozygous	61411225
1	48652175	48652176	C	A	43	INTERGENIC	homozygous	61411226
1	48652360	48652361	T	TCAAA	30	INTERGENIC	homozygous	61411227
1	48652395	48652396	G	-	31	INTERGENIC	heterozygous	61411228
1	48652903	48652904	G	C	30	INTERGENIC	homozygous	61411229
1	48652904	48652905	G	A	29	INTERGENIC	possibly homozygous	61411230
1	48652960	48652964	AAAG	----	20	INTERGENIC	homozygous	61411231
1	48652961	48652964	AAG	---	20	INTERGENIC	homozygous	61411232
1	48653129	48653130	G	A	25	INTERGENIC	possibly homozygous	61411233
1	48653164	48653165	G	C	18	INTERGENIC	homozygous	61411234
1	48653304	48653305	A	G	33	INTERGENIC	homozygous	61862231
1	48653345	48653346	T	C	38	INTERGENIC	homozygous	61411235
1	48653407	48653408	G	A	40	INTERGENIC	homozygous	61862232
1	48653443	48653444	G	A	51	INTERGENIC	homozygous	61696065
1	48654024	48654025	A	T	29	INTERGENIC	homozygous	61862233
1	48654305	48654306	G	A	33	INTERGENIC	homozygous	61862234
1	48654411	48654412	G	A	23	INTERGENIC	homozygous	61862235
1	48654416	48654417	G	A	24	INTERGENIC	homozygous	61862236
1	48654552	48654553	T	C	37	INTERGENIC	homozygous	61862237
1	48654575	48654576	T	C	43	INTERGENIC	homozygous	61862238
1	48655363	48655364	A	T	26	INTERGENIC	homozygous	61862239
1	48655394	48655395	C	T	25	INTERGENIC	homozygous	61862240
1	48655629	48655630	G	T	22	INTERGENIC	homozygous	61862241
1	48655966	48655967	G	T	24	INTERGENIC	homozygous	61862242
1	48655969	48655972	TTT	---	20	INTERGENIC	homozygous	61862243
1	48655991	48655992	G	T	34	INTERGENIC	homozygous	61862244
1	48656575	48656576	A	ATC	19	INTERGENIC	homozygous	60699354
1	48656607	48656608	A	AG	8	INTERGENIC	homozygous	60699355
1	48656612	48656613	G	GCCAGGACTA	8	INTERGENIC	homozygous	60699356
1	48656622	48656623	A	ACC	18	INTERGENIC	homozygous	60699357
1	48656629	48656630	C	CAA	22	INTERGENIC	homozygous	60699358
1	48656696	48656697	G	A	32	INTERGENIC	homozygous	61862245
1	48656772	48656773	T	C	33	INTERGENIC	homozygous	61862246
1	48656891	48656892	G	A	26	INTERGENIC	homozygous	61862247
1	48656949	48656950	A	G	35	INTERGENIC	homozygous	61862248
1	48656983	48656984	T	C	47	INTERGENIC	homozygous	61862249
1	48657129	48657130	A	G	40	INTERGENIC	homozygous	61862250
1	48657344	48657345	A	G	30	INTERGENIC	homozygous	61862251
1	48657377	48657379	CG	--	33	INTERGENIC	homozygous	61411240
1	48657434	48657435	C	T	34	INTERGENIC	homozygous	61862252
1	48657464	48657465	T	C	30	INTERGENIC	homozygous	61862253
1	48657628	48657629	G	A	22	INTERGENIC	homozygous	61862254
1	48657673	48657674	T	C	29	INTERGENIC	homozygous	61862255
1	48657954	48657955	C	A	28	INTERGENIC	homozygous	61862256
1	48658077	48658078	T	C	27	INTERGENIC	homozygous	61862257
1	48658408	48658409	C	T	37	INTERGENIC	homozygous	61862258
1	48658618	48658619	T	C	32	INTERGENIC	homozygous	61862259
1	48658801	48658802	G	T	21	INTERGENIC	homozygous	61862260
1	48658998	48658999	C	CTGTT	14	INTERGENIC	homozygous	61862261
1	48659696	48659697	A	G	21	INTERGENIC	homozygous	61862262
1	48659814	48659815	C	T	28	INTERGENIC	homozygous	61862263
1	48660251	48660252	G	A	34	INTERGENIC	homozygous	61862264
1	48660388	48660392	CTTC	----	25	INTERGENIC	homozygous	61862265
1	48660513	48660514	T	C	19	INTERGENIC	possibly homozygous	61862266
1	48660520	48660521	C	CT	18	INTERGENIC	possibly homozygous	61862267
1	48660553	48660557	TATC	----	11	INTERGENIC	heterozygous	61862268
1	48660581	48660582	T	TC	15	INTERGENIC	homozygous	61862269
1	48660605	48660606	C	T	27	INTERGENIC	heterozygous	61862270
1	48660607	48660610	ATC	---	26	INTERGENIC	heterozygous	61862271
1	48660609	48660610	C	CT	27	INTERGENIC	possibly homozygous	61862272
1	48660727	48660728	G	A	36	INTERGENIC	homozygous	61862273
1	48660746	48660747	C	CCAT	34	INTERGENIC	homozygous	61862274
1	48660857	48660858	A	G	27	INTERGENIC	homozygous	61862275
1	48660942	48660943	T	C	16	INTERGENIC	homozygous	61862276
1	48661045	48661046	T	C	27	INTERGENIC	homozygous	61862277
1	48661058	48661059	T	C	31	INTERGENIC	homozygous	61862278
1	48661164	48661166	TT	--	33	INTERGENIC	homozygous	61862279
1	48661483	48661484	T	C	35	INTERGENIC	homozygous	61862280
1	48661505	48661506	C	T	38	INTERGENIC	homozygous	61862281
1	48661584	48661585	C	T	35	INTERGENIC	homozygous	61862282
1	48661675	48661676	C	T	16	INTERGENIC	homozygous	61862283
1	48661679	48661680	A	G	15	INTERGENIC	homozygous	61862284
1	48661934	48661935	A	T	48	INTERGENIC	homozygous	61862285
1	48662170	48662171	C	A	25	INTERGENIC	homozygous	61862286
1	48662430	48662431	A	-	21	INTERGENIC	homozygous	61862287
1	48663170	48663171	A	G	36	INTERGENIC	homozygous	61862288
1	48663549	48663550	A	G	23	INTERGENIC	homozygous	61862289
1	48663629	48663630	G	A	16	INTERGENIC	possibly homozygous	61862290
1	48663707	48663719	GGAACAGTCTGG	------------	12	INTERGENIC	homozygous	61862291
1	48663919	48663920	T	C	34	INTERGENIC	homozygous	61862292
1	48663992	48663993	A	T	32	INTERGENIC	homozygous	61862293
1	48664447	48664448	T	TTGGATGTCC	10	INTERGENIC	homozygous	61862294
1	48664601	48664603	AC	--	21	INTERGENIC	homozygous	61862295
1	48664970	48664972	TG	--	33	INTERGENIC	possibly homozygous	61862296
1	48665013	48665014	A	G	36	INTERGENIC	homozygous	61862297
1	48666010	48666011	A	G	50	INTERGENIC	homozygous	61862298
1	48666475	48666476	A	G	28	INTERGENIC	homozygous	61862299
1	48666568	48666569	A	G	35	INTERGENIC	homozygous	61862300
1	48666891	48666892	A	G	27	INTERGENIC	possibly homozygous	61862301
1	48667637	48667638	G	GTTTC	19	INTERGENIC	homozygous	61862302
1	48667828	48667830	TA	--	29	INTERGENIC	homozygous	61862303
1	48668201	48668202	T	TTATC	12	INTERGENIC	homozygous	60699360
1	48668591	48668592	A	G	31	INTERGENIC	homozygous	61411244
1	48668811	48668812	G	A	17	INTERGENIC	homozygous	61862304
1	48668891	48668892	C	A	13	INTERGENIC	possibly homozygous	61862305
1	48669579	48669580	T	TA	23	INTERGENIC	homozygous	61411245
1	48670265	48670266	A	G	44	INTERGENIC	homozygous	61411247
1	48670314	48670315	T	C	34	INTERGENIC	homozygous	61862306
1	48672574	48672575	A	G	36	INTERGENIC	homozygous	61411248
1	48672921	48672925	AGAG	----	4	INTERGENIC	homozygous	61290489
1	48673094	48673095	A	G	29	INTERGENIC	homozygous	61411250
1	48673136	48673137	G	A	21	INTERGENIC	homozygous	61411251
1	48673174	48673178	AAAT	----	2	INTERGENIC	homozygous	60699361
1	48673617	48673618	T	C	33	INTERGENIC	homozygous	61862307
1	48674082	48674083	C	T	18	INTERGENIC	possibly homozygous	61411255
1	48674095	48674096	T	C	18	INTERGENIC	homozygous	61862308
1	48674316	48674317	C	A	38	INTERGENIC	homozygous	61862309
1	48674507	48674508	G	A	40	INTERGENIC	homozygous	61411256
1	48674695	48674696	C	CCA	22	INTERGENIC	homozygous	61411258
1	48675483	48675484	T	-	23	INTERGENIC	homozygous	61411259
1	48676380	48676384	AAAC	----	18	INTERGENIC	possibly homozygous	60699362
1	48675755	48675756	T	C	39	INTERGENIC	homozygous	61411260
1	48675989	48675990	G	GT	18	INTERGENIC	homozygous	61862310
1	48676376	48676384	AAACAAAC	--------	18	INTERGENIC	heterozygous	61411265
1	48676472	48676473	T	C	31	INTERGENIC	homozygous	61862311
1	48677986	48677987	G	A	30	INTERGENIC	homozygous	61862312
1	48678105	48678107	TT	--	11	INTERGENIC	possibly homozygous	61862313
1	48678223	48678224	A	G	22	INTERGENIC	possibly homozygous	61411267
1	48678443	48678444	T	A	27	INTERGENIC	homozygous	61862314
1	48679282	48679283	A	G	36	INTERGENIC	homozygous	61411268
1	48679544	48679545	A	C	36	INTERGENIC	homozygous	61411269
1	48679673	48679674	C	T	37	INTERGENIC	homozygous	61862315
1	48679807	48679808	C	A	35	INTERGENIC	homozygous	61411271
1	48680037	48680039	AG	--	33	INTERGENIC	homozygous	61411272
1	48680243	48680244	C	G	16	INTERGENIC	homozygous	61411275
1	48680247	48680259	TACTTAGAAAGC	------------	7	INTERGENIC	homozygous	61411276
1	48680307	48680308	T	A	26	INTERGENIC	homozygous	61862316
1	48680429	48680430	G	GCTCTCTCTCT	16	INTERGENIC	homozygous	60699363
1	48680429	48680430	G	T	29	INTERGENIC	heterozygous	61666191
1	48680715	48680716	C	T	26	INTERGENIC	homozygous	61411282
1	48682171	48682172	C	T	31	INTERGENIC	homozygous	61411283
1	48682336	48682337	G	A	29	INTERGENIC	homozygous	61411284
1	48682543	48682544	C	T	24	INTERGENIC	homozygous	61411285
1	48682811	48682812	T	-	22	INTERGENIC	homozygous	61411286
1	48683124	48683125	A	T	33	INTERGENIC	homozygous	61411288
1	48683577	48683578	C	CTT	8	INTERGENIC	homozygous	61862317
1	48683661	48683662	C	G	15	INTERGENIC	homozygous	61411290
1	48683767	48683773	AAGATT	------	8	INTERGENIC	homozygous	61862318
1	48683890	48683891	G	A	21	INTERGENIC	homozygous	61862319
1	48683914	48683915	T	-	12	INTERGENIC	homozygous	61290490
1	48684553	48684554	T	C	26	INTERGENIC	homozygous	61411292
1	48685138	48685144	CCAGAT	------	7	INTERGENIC	homozygous	61411293
1	48685216	48685217	T	C	16	INTERGENIC	homozygous	61411294
1	48685302	48685304	TG	--	19	INTERGENIC	possibly homozygous	61411295
1	48685361	48685362	A	ATGTG	21	INTERGENIC	possibly homozygous	61411296
1	48685361	48685362	A	ATG	21	INTERGENIC	heterozygous	61666192
1	48685525	48685526	G	C	40	INTERGENIC	homozygous	61411297
1	48685860	48685861	G	A	41	INTERGENIC	homozygous	61411298
1	48686280	48686281	A	G	45	INTERGENIC	homozygous	61411300
1	48687350	48687351	T	C	20	INTERGENIC	homozygous	61411301
1	48689867	48689868	A	-	19	INTERGENIC	homozygous	61411302
1	48690374	48690382	GAGAGAGA	--------	23	INTERGENIC	homozygous	61411305
1	48690489	48690490	C	T	44	INTERGENIC	homozygous	61862320
1	48691017	48691018	G	A	31	INTERGENIC	homozygous	61411306
1	48691031	48691033	TC	--	32	INTERGENIC	homozygous	61411307
1	48692483	48692486	TTG	---	17	INTERGENIC	homozygous	61411308
1	48692603	48692604	A	AC	9	INTERGENIC	homozygous	61411309
1	48693337	48693338	T	A	22	INTERGENIC	homozygous	61411310
1	48693611	48693612	T	C	23	INTERGENIC	homozygous	61411311
1	48694260	48694261	T	C	28	INTERGENIC	homozygous	61411314
1	48694332	48694358	TCTTTCTGATAGTCTGATGGAAGCAA	--------------------------	4	INTERGENIC	homozygous	61411315
1	48696192	48696193	T	C	42	INTERGENIC	homozygous	61411317
1	48697198	48697199	A	G	32	INTERGENIC	homozygous	61411318
1	48698153	48698154	T	C	23	INTERGENIC	homozygous	61411319
1	48698848	48698849	T	C	24	INTERGENIC	homozygous	61411320
1	48699600	48699601	C	T	26	INTERGENIC	homozygous	61862321
1	48699756	48699757	G	-	36	INTERGENIC	homozygous	61411322
1	48700884	48700885	T	TTC	27	INTERGENIC	possibly homozygous	61411323
1	48700885	48700886	T	TC	27	INTERGENIC	possibly homozygous	61411324
1	48700886	48700887	T	C	30	INTERGENIC	heterozygous	61666193
1	48701553	48701554	C	T	32	INTERGENIC	homozygous	61411326
1	48701832	48701833	C	A	41	INTERGENIC	homozygous	61862322
1	48702238	48702239	T	C	40	INTERGENIC	homozygous	61862323
1	48702623	48702624	G	T	30	INTERGENIC	possibly homozygous	61411328
1	48702907	48702909	TT	--	3	INTERGENIC	heterozygous	61411329
1	48702908	48702909	T	-	3	INTERGENIC	heterozygous	61411330
1	48704463	48704464	C	T	31	INTERGENIC	homozygous	61862324
1	48704711	48704712	C	A	33	INTERGENIC	homozygous	61862325
1	48705755	48705761	CTTGTC	------	8	INTERGENIC	possibly homozygous	61696069
1	48705913	48705914	C	CT	4	INTERGENIC	homozygous	61411333
1	48706007	48706008	T	C	26	INTERGENIC	homozygous	61411334
1	48706167	48706168	G	A	32	INTERGENIC	homozygous	61411335
1	48706431	48706432	C	A	32	INTERGENIC	homozygous	61411337
1	48706654	48706655	A	G	37	INTERGENIC	homozygous	61411338
1	48706790	48706791	G	GAA	15	INTERGENIC	possibly homozygous	61411339
1	48706804	48706805	T	A	22	INTERGENIC	homozygous	61411340
1	48706856	48706857	A	T	28	INTERGENIC	homozygous	61411341
1	48707162	48707163	T	C	28	INTERGENIC	homozygous	61411342
1	48707721	48707722	T	C	31	INTERGENIC	homozygous	61411343
1	48708682	48708683	T	C	32	INTERGENIC	homozygous	61411345
1	48708727	48708728	T	C	32	INTERGENIC	homozygous	61411346
1	48708831	48708832	G	A	21	INTERGENIC	homozygous	61862326
1	48708980	48708981	T	G	40	INTERGENIC	homozygous	61411348
1	48709074	48709081	TTTTTTT	-------	13	INTERGENIC	homozygous	61862327
1	48709104	48709105	G	T	28	INTERGENIC	homozygous	60699367
1	48709298	48709299	G	GT	43	INTERGENIC	homozygous	61862328
1	48709874	48709875	G	A	29	INTERGENIC	homozygous	61862329
1	48709944	48709946	GT	--	7	INTERGENIC	possibly homozygous	60699368