chr start stop reference nuc variant nuc depth genic status zygosity variant ID 1 48521851 48521852 T - 1 GENIC homozygous 61410897 1 48526658 48526659 C T 26 GENIC homozygous 61410898 1 48526917 48526918 T TA 4 GENIC heterozygous 61666182 1 48530984 48530985 C T 24 GENIC homozygous 61410899 1 48531481 48531482 T C 15 GENIC homozygous 61410900 1 48532749 48532750 G A 28 GENIC homozygous 61410901 1 48532979 48532980 G A 40 GENIC homozygous 61410902 1 48533008 48533009 C T 27 GENIC homozygous 61410903 1 48533398 48533399 G T 18 GENIC homozygous 61410904 1 48533712 48533713 A G 30 GENIC homozygous 61410905 1 48533988 48533989 T A 33 GENIC homozygous 61410906 1 48535534 48535535 T - 10 GENIC possibly homozygous 61410908 1 48536134 48536135 A AAAAAAC 18 GENIC homozygous 61410909 1 48537189 48537190 A G 31 GENIC homozygous 61410910 1 48537612 48537613 G T 15 GENIC homozygous 61410911 1 48538176 48538177 T G 27 GENIC homozygous 61410912 1 48540134 48540135 A G 17 GENIC homozygous 61410913 1 48540385 48540386 G - 13 GENIC homozygous 61410914 1 48540396 48540405 GTTTTTTTG --------- 5 GENIC heterozygous 61410915 1 48540396 48540397 G - 5 GENIC heterozygous 61410916 1 48540404 48540405 G - 13 GENIC homozygous 61410917 1 48540757 48540758 T C 29 GENIC homozygous 61410918 1 48540903 48540904 T C 21 GENIC homozygous 61410919 1 48541052 48541053 C CTT 4 GENIC homozygous 61410920 1 48541144 48541145 C - 3 GENIC heterozygous 61410921 1 48541144 48541145 C CCCCCATCCCACA 3 GENIC homozygous 61410922 1 48541151 48541152 T A 4 GENIC heterozygous 61666183 1 48541301 48541302 G A 14 GENIC homozygous 61410923 1 48541372 48541373 C T 14 GENIC homozygous 61410924 1 48541387 48541388 A - 7 GENIC homozygous 61410925 1 48541652 48541653 A G 19 GENIC homozygous 61410926 1 48541682 48541683 T C 19 GENIC homozygous 61410927 1 48541708 48541709 G C 11 GENIC homozygous 61410928 1 48541725 48541726 C - 5 GENIC homozygous 61410929 1 48541814 48541815 C T 12 GENIC homozygous 61410930 1 48541815 48541816 A G 12 GENIC homozygous 61410931 1 48541840 48541841 T C 14 GENIC homozygous 61410932 1 48541852 48541853 C T 15 GENIC homozygous 61410933 1 48541865 48541866 C T 11 GENIC homozygous 61410934 1 48541898 48541899 G A 8 GENIC homozygous 61410935 1 48541916 48541917 C T 12 GENIC homozygous 61410936 1 48541939 48541940 A T 17 GENIC homozygous 61410937 1 48541979 48541980 C T 25 GENIC possibly homozygous 61410938 1 48542141 48542142 T C 15 GENIC homozygous 61410939 1 48542174 48542175 C G 13 GENIC possibly homozygous 61410940 1 48542176 48542177 G A 14 GENIC possibly homozygous 61410941 1 48542238 48542239 C T 13 GENIC possibly homozygous 61410942 1 48542240 48542241 A C 13 GENIC possibly homozygous 61410943 1 48542287 48542288 G C 15 GENIC homozygous 61410944 1 48542455 48542456 T C 27 GENIC homozygous 61410945 1 48542734 48542738 AGAC ---- 25 GENIC homozygous 61410946 1 48543247 48543248 C T 18 GENIC homozygous 61410947 1 48543564 48543565 A G 15 GENIC homozygous 61410948 1 48544085 48544086 C T 24 GENIC homozygous 61410949 1 48544400 48544401 G GA 34 GENIC homozygous 61410950 1 48544496 48544497 C T 34 GENIC homozygous 61410951 1 48544947 48544948 G T 19 GENIC homozygous 61410952 1 48545094 48545095 T C 25 GENIC homozygous 61410953 1 48545329 48545330 T C 25 GENIC homozygous 61410954 1 48545440 48545441 C G 39 GENIC homozygous 61410955 1 48545635 48545636 A T 42 GENIC homozygous 61410956 1 48545701 48545702 C T 33 GENIC homozygous 61410957 1 48546008 48546009 A ACCTGCAGGGATGCTGCTTGAG 19 GENIC homozygous 61410958 1 48546083 48546084 T C 23 GENIC homozygous 61410959 1 48546214 48546215 G A 28 GENIC homozygous 61410960 1 48546240 48546241 C T 26 GENIC homozygous 61410961 1 48546522 48546523 C G 23 GENIC homozygous 61410962 1 48546680 48546681 G C 34 GENIC homozygous 61410963 1 48546735 48546736 T C 32 GENIC homozygous 61410964 1 48546842 48546843 T C 26 GENIC homozygous 61410965 1 48546900 48546901 A G 20 GENIC homozygous 61410966 1 48546997 48546998 G A 16 GENIC homozygous 61410967 1 48547243 48547244 G GGGATTTAGCTCAGT 11 GENIC homozygous 61410968 1 48547251 48547252 C T 7 GENIC homozygous 61666184 1 48547307 48547308 A AAT 8 GENIC homozygous 61410969 1 48547688 48547689 T C 20 GENIC homozygous 61410970 1 48548432 48548433 T G 26 GENIC homozygous 61410971 1 48549353 48549354 C CAAAAA 1 GENIC homozygous 61666185 1 48549555 48549556 C T 29 GENIC possibly homozygous 61410972 1 48550391 48550392 A - 11 GENIC heterozygous 60699325 1 48551542 48551543 A G 26 GENIC homozygous 61410973 1 48551797 48551800 TTT --- 5 GENIC homozygous 61410974 1 48551889 48551891 CC -- 9 GENIC heterozygous 60699328 1 48551890 48551891 C - 9 GENIC heterozygous 60699329 1 48552318 48552342 GTGTGTGTGTGTGTGTGTGTGTGT ------------------------ 2 GENIC homozygous 61410975 1 48552663 48552664 C T 31 GENIC homozygous 61410976 1 48553035 48553039 TTTT ---- 1 GENIC homozygous 61410977 1 48553739 48553751 CACACACACACA ------------ 14 GENIC possibly homozygous 61410978 1 48553774 48553775 A G 29 GENIC heterozygous 61666186 1 48554131 48554132 T G 23 GENIC homozygous 61410979 1 48554232 48554233 T - 14 GENIC heterozygous 61410980 1 48554234 48554235 T C 16 GENIC heterozygous 61410981 1 48554236 48554247 TTTCTTTCTTT ----------- 8 GENIC possibly homozygous 61410982 1 48554609 48554610 A C 11 GENIC homozygous 61410983 1 48554653 48554654 A ATC 16 GENIC heterozygous 60699330 1 48555286 48555287 T G 20 GENIC homozygous 61410984 1 48555304 48555305 G A 19 GENIC homozygous 61410985 1 48555619 48555620 G A 34 GENIC homozygous 61410986 1 48555831 48555832 T C 25 GENIC homozygous 61410987 1 48555840 48555841 G C 29 GENIC homozygous 61410988 1 48555921 48555922 T C 25 GENIC homozygous 61410989 1 48556161 48556162 T C 10 GENIC homozygous 61410990 1 48556236 48556244 TGTGTGTA -------- 13 GENIC homozygous 61410991 1 48556248 48556249 T A 17 GENIC heterozygous 61410992 1 48556489 48556490 T TAAC 10 GENIC homozygous 61666187 1 48556719 48556720 A G 20 GENIC homozygous 61410994 1 48556798 48556799 T C 19 GENIC homozygous 61410995 1 48556914 48556915 A G 26 GENIC homozygous 61410996 1 48557135 48557136 G GAGA 23 GENIC homozygous 61410997 1 48557362 48557363 T TG 27 GENIC homozygous 61410998 1 48557435 48557436 G A 31 GENIC homozygous 61410999 1 48557935 48557936 G A 19 GENIC homozygous 61411000 1 48558033 48558034 T C 22 GENIC homozygous 61411001 1 48558240 48558241 G T 26 GENIC homozygous 61411002 1 48558300 48558301 T C 30 GENIC homozygous 61411003 1 48558777 48558778 T C 17 GENIC homozygous 61411004 1 48558815 48558816 C - 20 GENIC homozygous 61411005 1 48558845 48558846 G A 20 GENIC homozygous 61411006 1 48558929 48558930 T TGC 35 GENIC homozygous 61411007 1 48559003 48559004 T C 30 GENIC homozygous 61411008 1 48559022 48559026 CCCC ---- 11 GENIC homozygous 60699333 1 48559028 48559029 C T 12 GENIC homozygous 60699334 1 48559029 48559030 C G 12 GENIC homozygous 60699335 1 48559031 48559032 G GTAGT 11 GENIC homozygous 60699336 1 48559062 48559063 A C 22 GENIC homozygous 61411009 1 48559081 48559082 T TG 23 GENIC homozygous 61411010 1 48559153 48559154 C A 27 GENIC homozygous 61411011 1 48559189 48559190 C T 16 GENIC homozygous 61411012 1 48559211 48559212 A G 12 GENIC homozygous 61411013 1 48559725 48559726 G T 17 GENIC homozygous 61411015 1 48559766 48559767 C T 21 GENIC homozygous 61411016 1 48559924 48559925 A G 33 GENIC homozygous 61411017 1 48560111 48560112 T - 28 GENIC homozygous 61411018 1 48560456 48560457 G GTTT 16 GENIC homozygous 61411019 1 48560465 48560466 C T 21 GENIC homozygous 61666188 1 48560655 48560656 C T 36 GENIC homozygous 61411020 1 48560895 48560896 A G 25 GENIC homozygous 61411021 1 48560964 48560965 G A 29 GENIC homozygous 61411022 1 48561236 48561242 GTGTGC ------ 23 GENIC heterozygous 61411023 1 48561240 48561242 GC -- 27 GENIC homozygous 60699337 1 48561249 48561250 C T 33 GENIC possibly homozygous 61411024 1 48561759 48561760 T C 36 GENIC homozygous 61411025 1 48561767 48561768 C T 37 GENIC homozygous 61411026 1 48562115 48562116 A ACCCTGT 28 GENIC homozygous 61411027 1 48562137 48562138 T C 38 GENIC homozygous 61411028 1 48562411 48562412 C G 30 GENIC homozygous 61411029 1 48562659 48562660 C T 37 GENIC homozygous 61411030 1 48562725 48562726 C - 37 GENIC homozygous 61411031 1 48562937 48562938 A G 16 GENIC homozygous 61411032 1 48562973 48562974 A G 17 GENIC homozygous 61411033 1 48562974 48562975 G GGT 16 GENIC possibly homozygous 60699338 1 48562980 48562982 AA -- 10 GENIC homozygous 60699339 1 48562986 48562987 A T 12 GENIC homozygous 60699340 1 48562989 48562990 A G 12 GENIC homozygous 60699341 1 48562991 48562992 A C 12 GENIC possibly homozygous 60699342 1 48563000 48563001 A C 12 GENIC homozygous 60699343 1 48562984 48562985 G A 12 GENIC homozygous 61290484 1 48551888 48551891 CCC --- 9 GENIC heterozygous 61290482