Conflict Report: Baylor 3.4 chromosome 17

The chromosome location of genes was compared between the Baylor 3.4 and Celera genome assemblies.  164 genes were assigned to different chromosomes in the two assemblies.  111 of these fell into 6 groups based on sequential location of 5 or more genes.  A region on Baylor 3.4 chromosome 17 mapped to Celera chromosome 1. One gene did not fall into this region. For additional conflict information see conflict reports for regions on chromosomes 1, 7, 19, and X. A single gene conflict report is also available.

RGD  BAYLOR 3.4  CELERA 
RGD ID  GENE SYMBOL  ACC ID  CHR  START  END  STRAND  ACC ID  CHR  START  END  STRAND 
 
Chr17:41262-5395487
1306375 Mrpl36_predicted XM_344560 17 41262 42283 - XM_001061033 1 28605516 28606537 -
1309309 Irx4_predicted XM_225068 17 106202 117471 - XM_001057125 1 28670524 28680823 -
1309834 Irx2 NM_001039505 17 743533 748949 - XM_001053004 1 29295634 29301050 -
    XR_005556 17 1284008 1299475 + XR_007964 1 29823323 29838790 +
1309060 Irx1_predicted XM_225101 17 1390893 1396426 + XM_001057410 1 29929766 29935298 +
1310046 Adamts16_predicted XM_225142 17 2560021 2689573 + XM_001057527 1 31055603 31177384 +
1309747 RGD1309747_predicted XM_225143 17 2771759 2811255 + XM_001062297 1 31257550 31297046 +
1310128 RGD1310128_predicted XM_214417 17 3621203 3626906 - XM_001062474 1 32079797 32085500 -
1311954 Nsun2_predicted XM_341474 17 3822618 3844581 - XM_001057743 1 32267986 32289949 -
3757 Srd5a1 NM_017070 17 3845189 3879164 + NM_017070 1 32290557 32325769 +
1307356 Pols_predicted XM_225072 17 3925672 3958961 + XM_001062703 1 32324322 32403350 +
    XR_005621 17 4165386 4167227 - XR_008033 1 32604228 32606069 -
619965 Adcy2 NM_031007 17 4543500 5040432 + NM_031007 1 32960051 33391636 +
1308544 RGD1308544_predicted XM_341475 17 5044090 5069661 - XM_001063171 1 33395294 33420008 -
1309729 RGD1309729 XM_214418 17 5077471 5084779 - XM_001058032 1 33427814 33435122 -
1308671 Mtrr NM_001039003 17 5086218 5118085 + NM_001039003 1 33436561 33468428 +
1564382 RGD1564382_predicted XM_573967 17 5387316 5395487 - XM_001063878 1 33727685 33734370 -
 
Single Genes
727960 Hs1bp1 NM_181627 17 58536807 58537888 + NM_181627 2 169373703 169377127 -