Conflict Report: Baylor 3.4 chromosome 1

The chromosome location of genes was compared between the Baylor 3.4 and Celera genome assemblies.  164 genes were assigned to different chromosomes in the two assemblies.  111 of these fell into 6 groups based on sequential location of 5 or more genes.  A region on Baylor 3.4 chromosome 1 mapped to Celera chromosome 8. One gene did not fall into this region. For additional conflict information see conflict reports for regions on chromosomes 7, 17, 19, and X. A single gene conflict report is also available.

RGD 
BAYLOR 3.4 
CELERA 
RGD ID
GENE SYMBOL
ACC ID 
CHR 
START 
END 
STRAND 
ACC ID 
CHR 
START 
END 
STRAND 
 
Chr1:61846930-62875840
1565924
LOC499062
XM_001075446
1
61846930
61894377
+
XM_001071873
8
3621742
3635792
-
1359476
LOC292516
NM_001013893
1
62138020
62139357
-
NM_001013893
8
3484426
3485763
+
 
 
XR_006957
1
62423201
62468330
+
XM_001071402
8
3166807
3206773
-
 
 
XR_006959
1
62539316
62540155
-
XR_008757
8
3099396
3100235
+
1359695
V1re14
NM_001008936
1
62590084
62591034
-
NM_001008936
8
3049325
3050275
+
1359162
V1rm2
NM_001008921
1
62690311
62691225
-
NM_001008921
8
2949464
2950378
+
1359102
V1rm1
NM_001009525
1
62874935
62875840
-
NM_001009525
8
2771563
2772468
+
 
Single genes
628702
Ppp1r14b
NM_172045
1
209648656
209650766
+
NM_172045
12
17725470
17726451
+

 


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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.